RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 XAB2Q9HCS7 855 aaKnown RBP23.61■■□□□ 1.37
TMEM260-202ENST00000538838 EBF1Q9UH73 591 aa23.61■■□□□ 1.37
TMEM260-202ENST00000538838 SPO11Q9Y5K1 396 aa23.61■■□□□ 1.37
TMEM260-202ENST00000538838 A0A0U1RQS6 177 aa23.6■■□□□ 1.37
TMEM260-202ENST00000538838 NPIPB15A6NHN6 443 aaPredicted RBP23.6■■□□□ 1.37
TMEM260-202ENST00000538838 PAPSS2O95340 614 aaPredicted RBP23.6■■□□□ 1.37
TMEM260-202ENST00000538838 ECHS1P30084 290 aa23.6■■□□□ 1.37
TMEM260-202ENST00000538838 CAV1Q03135 178 aa23.6■■□□□ 1.37
TMEM260-202ENST00000538838 TMEM31Q5JXX7 168 aa23.6■■□□□ 1.37
TMEM260-202ENST00000538838 FNBP1LQ5T0N5 605 aa23.6■■□□□ 1.37
TMEM260-202ENST00000538838 CERCAMQ5T4B2 595 aa23.6■■□□□ 1.37
TMEM260-202ENST00000538838 DENND2CQ68D51 928 aa23.6■■□□□ 1.37
TMEM260-202ENST00000538838 USP45Q70EL2 814 aa23.6■■□□□ 1.37
TMEM260-202ENST00000538838 FAM124AQ86V42 546 aa23.6■■□□□ 1.37
TMEM260-202ENST00000538838 MCCC1Q96RQ3 725 aaPredicted RBP23.6■■□□□ 1.37
TMEM260-202ENST00000538838 B4GALT6Q9UBX8 382 aa23.6■■□□□ 1.37
TMEM260-202ENST00000538838 GGT7Q9UJ14 662 aa23.6■■□□□ 1.37
TMEM260-202ENST00000538838 PPIL1Q9Y3C6 166 aa23.6■■□□□ 1.37
TMEM260-202ENST00000538838 CACNA1IQ9P0X4 2223 aa23.6■■□□□ 1.37
TMEM260-202ENST00000538838 NUMA1Q14980 2115 aa23.6■■□□□ 1.37
TMEM260-202ENST00000538838 A8MX80 341 aa23.59■■□□□ 1.37
TMEM260-202ENST00000538838 HNF1BP35680 557 aa23.59■■□□□ 1.37
TMEM260-202ENST00000538838 TPMTP51580 245 aa23.59■■□□□ 1.37
TMEM260-202ENST00000538838 FAM193AP78312 1265 aa23.59■■□□□ 1.37
TMEM260-202ENST00000538838 CUL1Q13616 776 aa23.59■■□□□ 1.37
TMEM260-202ENST00000538838 ZCCHC9Q8N567 271 aaKnown RBP23.59■■□□□ 1.37
TMEM260-202ENST00000538838 CAMKK1Q8N5S9 505 aa23.59■■□□□ 1.37
TMEM260-202ENST00000538838 BLOC1S5Q8TDH9 187 aa23.59■■□□□ 1.37
TMEM260-202ENST00000538838 FAM131CQ96AQ9 280 aa23.59■■□□□ 1.37
TMEM260-202ENST00000538838 SCRN2Q96FV2 425 aa23.59■■□□□ 1.37
TMEM260-202ENST00000538838 C11orf16Q9NQ32 467 aa23.59■■□□□ 1.37
TMEM260-202ENST00000538838 PRMT8Q9NR22 394 aaPredicted RBP23.59■■□□□ 1.37
TMEM260-202ENST00000538838 USP36Q9P275 1121 aaKnown RBP23.59■■□□□ 1.37
TMEM260-202ENST00000538838 BANF1O75531 89 aa23.59■■□□□ 1.37
TMEM260-202ENST00000538838 MLNP12872 115 aa23.59■■□□□ 1.37
TMEM260-202ENST00000538838 MGAT1P26572 445 aa23.59■■□□□ 1.37
TMEM260-202ENST00000538838 MMP12P39900 470 aa23.59■■□□□ 1.37
TMEM260-202ENST00000538838 MAGEA3P43357 314 aa23.59■■□□□ 1.37
TMEM260-202ENST00000538838 TAS2R38P59533 333 aa23.59■■□□□ 1.37
TMEM260-202ENST00000538838 CRADDP78560 199 aa23.59■■□□□ 1.37
TMEM260-202ENST00000538838 MSLNQ13421 630 aaPredicted RBP23.59■■□□□ 1.37
TMEM260-202ENST00000538838 POU6F1Q14863 301 aa23.59■■□□□ 1.37
TMEM260-202ENST00000538838 HIF1AQ16665 826 aa23.59■■□□□ 1.37
TMEM260-202ENST00000538838 TSSK4Q6SA08 328 aa23.59■■□□□ 1.37
TMEM260-202ENST00000538838 USP30Q70CQ3 517 aa23.59■■□□□ 1.37
TMEM260-202ENST00000538838 TSPAN33Q86UF1 283 aa23.59■■□□□ 1.37
TMEM260-202ENST00000538838 GSPT2Q8IYD1 628 aaKnown RBP23.59■■□□□ 1.37
TMEM260-202ENST00000538838 NDUFAF2Q8N183 169 aa23.59■■□□□ 1.37
TMEM260-202ENST00000538838 NFU1Q9UMS0 254 aa23.59■■□□□ 1.37
TMEM260-202ENST00000538838 PLXND1Q9Y4D7 1925 aa23.58■■□□□ 1.37
TMEM260-202ENST00000538838 SLC4A1P02730 911 aa23.58■■□□□ 1.36
TMEM260-202ENST00000538838 LHCGRP22888 699 aa23.58■■□□□ 1.36
TMEM260-202ENST00000538838 ARL4CP56559 192 aa23.58■■□□□ 1.36
TMEM260-202ENST00000538838 MSS51Q4VC12 460 aa23.58■■□□□ 1.36
TMEM260-202ENST00000538838 ERAP2Q6P179 960 aa23.58■■□□□ 1.36
TMEM260-202ENST00000538838 KBTBD6Q86V97 674 aa23.58■■□□□ 1.36
TMEM260-202ENST00000538838 AGGF1Q8N302 714 aaeCLIP23.58■■□□□ 1.36
TMEM260-202ENST00000538838 MPP5Q8N3R9 675 aa23.58■■□□□ 1.36
TMEM260-202ENST00000538838 RAB7BQ96AH8 199 aa23.58■■□□□ 1.36
TMEM260-202ENST00000538838 FRMD8Q9BZ67 464 aaPredicted RBP23.58■■□□□ 1.36
TMEM260-202ENST00000538838 ITM2CQ9NQX7 267 aa23.58■■□□□ 1.36
TMEM260-202ENST00000538838 SYBUQ9NX95 663 aa23.58■■□□□ 1.36
TMEM260-202ENST00000538838 FZD4Q9ULV1 537 aa23.58■■□□□ 1.36
TMEM260-202ENST00000538838 NCKAP1Q9Y2A7 1128 aa23.58■■□□□ 1.36
TMEM260-202ENST00000538838 ZNF711Q9Y462 761 aa23.58■■□□□ 1.36
TMEM260-202ENST00000538838 AREL1O15033 823 aa23.57■■□□□ 1.36
TMEM260-202ENST00000538838 LAMTOR5O43504 91 aa23.57■■□□□ 1.36
TMEM260-202ENST00000538838 VIPR1P32241 457 aa23.57■■□□□ 1.36
TMEM260-202ENST00000538838 DMWDQ09019 674 aa23.57■■□□□ 1.36
TMEM260-202ENST00000538838 RALGDSQ12967 914 aa23.57■■□□□ 1.36
TMEM260-202ENST00000538838 ELF2Q15723 593 aa23.57■■□□□ 1.36
TMEM260-202ENST00000538838 DPPA4Q7L190 304 aa23.57■■□□□ 1.36
TMEM260-202ENST00000538838 LYSMD3Q7Z3D4 306 aa23.57■■□□□ 1.36
TMEM260-202ENST00000538838 DTWD2Q8NBA8 298 aa23.57■■□□□ 1.36
TMEM260-202ENST00000538838 RUBCNQ92622 972 aa23.57■■□□□ 1.36
TMEM260-202ENST00000538838 LYSMD1Q96S90 227 aa23.57■■□□□ 1.36
TMEM260-202ENST00000538838 FAM129AQ9BZQ8 928 aa23.57■■□□□ 1.36
TMEM260-202ENST00000538838 MAGEE1Q9HCI5 957 aa23.57■■□□□ 1.36
TMEM260-202ENST00000538838 CYP8B1Q9UNU6 501 aa23.57■■□□□ 1.36
TMEM260-202ENST00000538838 FADS3Q9Y5Q0 445 aa23.57■■□□□ 1.36
TMEM260-202ENST00000538838 AP3B1O00203 1094 aa23.56■■□□□ 1.36
TMEM260-202ENST00000538838 AURKAO14965 403 aa23.56■■□□□ 1.36
TMEM260-202ENST00000538838 PPFIA2O75334 1257 aa23.56■■□□□ 1.36
TMEM260-202ENST00000538838 SLC34A2O95436 690 aa23.56■■□□□ 1.36
TMEM260-202ENST00000538838 MYBL2P10244 700 aa23.56■■□□□ 1.36
TMEM260-202ENST00000538838 CYP2A6P11509 494 aaPredicted RBP23.56■■□□□ 1.36
TMEM260-202ENST00000538838 SUOXP51687 545 aa23.56■■□□□ 1.36
TMEM260-202ENST00000538838 ADPRHP54922 357 aa23.56■■□□□ 1.36
TMEM260-202ENST00000538838 VSNL1P62760 191 aa23.56■■□□□ 1.36
TMEM260-202ENST00000538838 DHX9Q08211 1270 aaKnown RBP23.56■■□□□ 1.36
TMEM260-202ENST00000538838 ELP6Q0PNE2 266 aa23.56■■□□□ 1.36
TMEM260-202ENST00000538838 SFSWAPQ12872 951 aaKnown RBP23.56■■□□□ 1.36
TMEM260-202ENST00000538838 SEPT6Q14141 434 aa23.56■■□□□ 1.36
TMEM260-202ENST00000538838 BBS9Q3SYG4 887 aa23.56■■□□□ 1.36
TMEM260-202ENST00000538838 CCDC38Q502W7 563 aa23.56■■□□□ 1.36
TMEM260-202ENST00000538838 CRTC1Q6UUV9 634 aa23.56■■□□□ 1.36
TMEM260-202ENST00000538838 C1orf210Q8IVY1 113 aa23.56■■□□□ 1.36
TMEM260-202ENST00000538838 PDIK1LQ8N165 341 aa23.56■■□□□ 1.36
TMEM260-202ENST00000538838 BFARQ9NZS9 450 aa23.56■■□□□ 1.36
TMEM260-202ENST00000538838 C1orf232A0A0U1RR37 186 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms