RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 RAB43Q86YS6 212 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 UNC5BQ8IZJ1 945 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 KCTD17Q8N5Z5 321 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 FANK1Q8TC84 345 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 ACTL9Q8TC94 416 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 NCLNQ969V3 563 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 TMEM47Q9BQJ4 181 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 ZNF385DQ9H6B1 395 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 EPS8L2Q9H6S3 715 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 WDR55Q9H6Y2 383 aaPredicted RBP8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 WDR70Q9NW82 654 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 EMC3Q9P0I2 261 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 VTI1BQ9UEU0 232 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 SFMBT1Q9UHJ3 866 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 SARDHQ9UL12 918 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 AGTPBP1Q9UPW5 1226 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 CDYLQ9Y232 598 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 PDE10AQ9Y233 779 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 COMMD10Q9Y6G5 202 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 PNMA8CA0A1B0GUJ8 204 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 PIK3R2O00459 728 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 NRP1O14786 923 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 CHADO15335 359 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 ATG13O75143 517 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 CALB1P05937 261 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 CSH1P0DML2 217 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 CSH2P0DML3 217 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 CD1EP15812 388 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 ITGA2P17301 1181 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 MAGP20916 626 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 ARRB2P32121 409 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 CENPAP49450 140 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 MCCD1P59942 119 aaPredicted RBP8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 PSMC5P62195 406 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 PSMC6P62333 389 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 BAMBIQ13145 260 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 GEN1Q17RS7 908 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 ATP13A4Q4VNC1 1196 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 P2RY8Q86VZ1 359 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 ERO1BQ86YB8 467 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 TBC1D21Q8IYX1 336 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 DEPDC1BQ8WUY9 529 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 CPA5Q8WXQ8 436 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 BIRC7Q96CA5 298 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 PPA2Q9H2U2 334 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 ZFP14Q9HCL3 533 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 SLC39A1Q9NY26 324 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 DTLQ9NZJ0 730 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 CD300AQ9UGN4 299 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 AFG3L2Q9Y4W6 797 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 CICQ96RK0 1608 aaPredicted RBP8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 TNS3Q68CZ2 1445 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 A0A1W2PRG6 482 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 HMX2A2RU54 273 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 FAM149AA5PLN7 773 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 PEX14O75381 377 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 SNAP29O95721 258 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 IFNA14P01570 189 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 TFE3P19532 575 aaPredicted RBP8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 TGM2P21980 687 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 OSBPP22059 807 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 CCNA1P78396 465 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 PPP3CAQ08209 521 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 MAMLD1Q13495 774 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 ZNF404Q494X3 552 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 SPATC1Q76KD6 591 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 NIPA1Q7RTP0 329 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 KIF18BQ86Y91 864 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 SYTL1Q8IYJ3 562 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 C8orf59Q8N0T1 100 aaPredicted RBP8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 ZNF444Q8N0Y2 327 aaPredicted RBP8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 FNDC5Q8NAU1 212 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 RORBQ92753 470 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 UROC1Q96N76 676 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 NODALQ96S42 347 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 NUAK2Q9H093 628 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 SNX15Q9NRS6 342 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 INTS10Q9NVR2 710 aaKnown RBP8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 COQ3Q9NZJ6 369 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 MKLN1Q9UL63 735 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 PLIN4Q96Q06 1357 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 TRPM3Q9HCF6 1732 aaPredicted RBP8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 SCN11AQ9UI33 1791 aa8.56□□□□□ -1.04
SRGAP1-202ENST00000537556 FAM159BA6NKW6 160 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 A8MV72 311 aaPredicted RBP8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 ZNF487B1APH4 448 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 I3L521 148 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 PDHXO00330 501 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 MEIS1O00470 390 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 CAPN5O15484 640 aaPredicted RBP8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 CBLP22681 906 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 EPHX2P34913 555 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 CDKN2BP42772 138 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 GNPDA1P46926 289 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 GP2P55259 537 aaKnown RBP8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 VBP1P61758 197 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 PRKCDQ05655 676 aa8.55□□□□□ -1.04
SRGAP1-202ENST00000537556 FAPQ12884 760 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms