RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 TMEM47Q9BQJ4 181 aa5.57□□□□□ -1.52
PRKDC-208ENST00000536710 IFIH1Q9BYX4 1025 aaKnown RBP5.57□□□□□ -1.52
PRKDC-208ENST00000536710 KLHL31Q9H511 634 aa5.57□□□□□ -1.52
PRKDC-208ENST00000536710 SLC28A3Q9HAS3 691 aa5.57□□□□□ -1.52
PRKDC-208ENST00000536710 PLSCR4Q9NRQ2 329 aa5.57□□□□□ -1.52
PRKDC-208ENST00000536710 CYSLTR2Q9NS75 346 aa5.57□□□□□ -1.52
PRKDC-208ENST00000536710 DECR2Q9NUI1 292 aa5.57□□□□□ -1.52
PRKDC-208ENST00000536710 CISD1Q9NZ45 108 aaKnown RBP5.57□□□□□ -1.52
PRKDC-208ENST00000536710 NENFQ9UMX5 172 aa5.57□□□□□ -1.52
PRKDC-208ENST00000536710 R3HDM2Q9Y2K5 976 aaKnown RBP5.57□□□□□ -1.52
PRKDC-208ENST00000536710 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.57□□□□□ -1.52
PRKDC-208ENST00000536710 ZMYM2Q9UBW7 1377 aa5.56□□□□□ -1.52
PRKDC-208ENST00000536710 ZNF814B7Z6K7 855 aa5.56□□□□□ -1.52
PRKDC-208ENST00000536710 CHL1O00533 1208 aa5.56□□□□□ -1.52
PRKDC-208ENST00000536710 MDM4O15151 490 aa5.56□□□□□ -1.52
PRKDC-208ENST00000536710 AGAP20933 346 aa5.56□□□□□ -1.52
PRKDC-208ENST00000536710 SAT1P21673 171 aa5.56□□□□□ -1.52
PRKDC-208ENST00000536710 CLCN3P51790 818 aa5.56□□□□□ -1.52
PRKDC-208ENST00000536710 HMGA2P52926 109 aa5.56□□□□□ -1.52
PRKDC-208ENST00000536710 IFI35P80217 286 aaPredicted RBP5.56□□□□□ -1.52
PRKDC-208ENST00000536710 IKQ13123 557 aaPredicted RBP5.56□□□□□ -1.52
PRKDC-208ENST00000536710 TRIP6Q15654 476 aaKnown RBP5.56□□□□□ -1.52
PRKDC-208ENST00000536710 ASPHD1Q5U4P2 390 aa5.56□□□□□ -1.52
PRKDC-208ENST00000536710 HIST2H2BCQ6DN03 193 aa5.56□□□□□ -1.52
PRKDC-208ENST00000536710 HIST2H2BDQ6DRA6 164 aa5.56□□□□□ -1.52
PRKDC-208ENST00000536710 SHC4Q6S5L8 630 aa5.56□□□□□ -1.52
PRKDC-208ENST00000536710 SLC16A12Q6ZSM3 486 aa5.56□□□□□ -1.52
PRKDC-208ENST00000536710 TRAPPC11Q7Z392 1133 aa5.56□□□□□ -1.52
PRKDC-208ENST00000536710 RBFAQ8N0V3 343 aa5.56□□□□□ -1.52
PRKDC-208ENST00000536710 BEST2Q8NFU1 509 aa5.56□□□□□ -1.52
PRKDC-208ENST00000536710 SGCDQ92629 289 aa5.56□□□□□ -1.52
PRKDC-208ENST00000536710 MSI2Q96DH6 328 aaKnown RBP5.56□□□□□ -1.52
PRKDC-208ENST00000536710 PGAM5Q96HS1 289 aa5.56□□□□□ -1.52
PRKDC-208ENST00000536710 ZFYVE19Q96K21 471 aa5.56□□□□□ -1.52
PRKDC-208ENST00000536710 C1QTNF5Q9BXJ0 243 aa5.56□□□□□ -1.52
PRKDC-208ENST00000536710 TRNAU1APQ9NX07 287 aaKnown RBP5.56□□□□□ -1.52
PRKDC-208ENST00000536710 SUCLA2Q9P2R7 463 aaPredicted RBP5.56□□□□□ -1.52
PRKDC-208ENST00000536710 FBXL17Q9UF56 701 aa5.56□□□□□ -1.52
PRKDC-208ENST00000536710 CEPT1Q9Y6K0 416 aa5.56□□□□□ -1.52
PRKDC-208ENST00000536710 MAU2Q9Y6X3 613 aa5.56□□□□□ -1.52
PRKDC-208ENST00000536710 TMEM272A0A1B0GTI8 110 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 FAM90A8PA6NJQ4 464 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 KDM4EB2RXH2 506 aaPredicted RBP5.55□□□□□ -1.52
PRKDC-208ENST00000536710 AKR1B15C9JRZ8 316 aaPredicted RBP5.55□□□□□ -1.52
PRKDC-208ENST00000536710 H3BQ06 376 aaPredicted RBP5.55□□□□□ -1.52
PRKDC-208ENST00000536710 CTDSP2O14595 271 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 SCAMP1O15126 338 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 HS6ST1O60243 411 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 PLOD3O60568 738 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 CNOT3O75175 753 aaKnown RBP5.55□□□□□ -1.52
PRKDC-208ENST00000536710 NDUFB8O95169 186 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 KLKB1P03952 638 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 CELA2AP08217 269 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 MMP2P08253 660 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 FAM90A13PP0C7W8 464 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 FAM90A24PP0C7X0 464 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 GABRB1P18505 474 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 RRM1P23921 792 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 MMP13P45452 471 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 CAMPP49913 170 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 MFAP4P55083 255 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 IRX6P78412 446 aaPredicted RBP5.55□□□□□ -1.52
PRKDC-208ENST00000536710 ASTE1Q2TB18 679 aaPredicted RBP5.55□□□□□ -1.52
PRKDC-208ENST00000536710 USP41Q3LFD5 358 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 C6orf141Q5SZD1 244 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 C10orf25Q5T742 122 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 NUGGCQ68CJ6 796 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 TRILQ7L0X0 811 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 PRIMA1Q86XR5 153 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 SFTPA2Q8IWL1 248 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 GABPB2Q8TAK5 448 aaPredicted RBP5.55□□□□□ -1.52
PRKDC-208ENST00000536710 BICD2Q8TD16 824 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 GPT2Q8TD30 523 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 SNAPC3Q92966 411 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 ERGIC1Q969X5 290 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 HARBI1Q96MB7 349 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 SRSF8Q9BRL6 282 aaKnown RBP5.55□□□□□ -1.52
PRKDC-208ENST00000536710 PLK3Q9H4B4 646 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 PDZD7Q9H5P4 517 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 PDE7BQ9NP56 450 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 FZD3Q9NPG1 666 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 GPR108Q9NPR9 543 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 OGFRQ9NZT2 677 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 MRPL15Q9P015 296 aaKnown RBP5.55□□□□□ -1.52
PRKDC-208ENST00000536710 PCDHA12Q9UN75 941 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 ERVK-11Q9UQG0 969 aa5.55□□□□□ -1.52
PRKDC-208ENST00000536710 GAGE12JA6NER3 117 aa5.54□□□□□ -1.52
PRKDC-208ENST00000536710 HCRTR2O43614 444 aa5.54□□□□□ -1.52
PRKDC-208ENST00000536710 ATG13O75143 517 aa5.54□□□□□ -1.52
PRKDC-208ENST00000536710 ERAL1O75616 437 aaKnown RBP5.54□□□□□ -1.52
PRKDC-208ENST00000536710 IFNA2P01563 188 aa5.54□□□□□ -1.52
PRKDC-208ENST00000536710 DNTTP04053 509 aa5.54□□□□□ -1.52
PRKDC-208ENST00000536710 SRPRAP08240 638 aaKnown RBP5.54□□□□□ -1.52
PRKDC-208ENST00000536710 MYF6P23409 242 aa5.54□□□□□ -1.52
PRKDC-208ENST00000536710 SLC15A1P46059 708 aa5.54□□□□□ -1.52
PRKDC-208ENST00000536710 ALDH7A1P49419 539 aaKnown RBP5.54□□□□□ -1.52
PRKDC-208ENST00000536710 PSMC6P62333 389 aa5.54□□□□□ -1.52
PRKDC-208ENST00000536710 ACSM2AQ08AH3 577 aa5.54□□□□□ -1.52
PRKDC-208ENST00000536710 SHBQ15464 509 aa5.54□□□□□ -1.52
PRKDC-208ENST00000536710 EZH2Q15910 746 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms