RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 TRIM24O15164 1050 aa13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 PLIN3O60664 434 aa13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 SERPINA6P08185 405 aa13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ARSAP15289 507 aa13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ACADSP16219 412 aa13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CCNCP24863 283 aa13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CD70P32970 193 aa13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 MAGEA12P43365 314 aa13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TNK2Q07912 1038 aa13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 PDE1CQ14123 709 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 COL19A1Q14993 1142 aa13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 KHDC1Q4VXA5 237 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 FASTKD1Q53R41 847 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 GRTP1Q5TC63 336 aa13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 MBLAC2Q68D91 279 aa13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 IL31Q6EBC2 164 aa13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ASTLQ6HA08 431 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TANGO2Q6ICL3 276 aa13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CES5AQ6NT32 575 aa13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 LINGO4Q6UY18 593 aa13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 OTOP3Q7RTS5 596 aa13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 SMRP1Q8NCR6 262 aa13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ATP2A3Q93084 1043 aa13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 KXD1Q9BQD3 176 aa13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 BBS2Q9BXC9 721 aa13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 C1orf21Q9H246 121 aa13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 PDFQ9HBH1 243 aa13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ATP13A1Q9HD20 1204 aa13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CDH7Q9ULB5 785 aa13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ZNF510Q9Y2H8 683 aa13.04□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TTC24A2A3L6 582 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 OTOL1A6NHN0 477 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 SOBPA7XYQ1 873 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 HEPACAM2A8MVW5 462 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CBX4O00257 560 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CYP17A1P05093 508 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 POLBP06746 335 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ITGA2BP08514 1039 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 FGF3P11487 239 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 GP5P40197 560 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 AQP5P55064 265 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 SESN2P58004 480 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 MAXP61244 160 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 MRPS35P82673 323 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 GRM2Q14416 872 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TSNAXIP1Q2TAA8 658 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ANO4Q32M45 955 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 MPPE1Q53F39 396 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ATAT1Q5SQI0 421 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TEDDM1Q5T9Z0 273 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CASC4Q6P4E1 433 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 VITQ6UXI7 678 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 PID1Q7Z2X4 250 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TREML1Q86YW5 311 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 APLFQ8IW19 511 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 UNC5BQ8IZJ1 945 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 APCDD1Q8J025 514 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CPNE1Q99829 537 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 PLA2G2FQ9BZM2 168 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 FAM96AQ9H5X1 160 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 SPHK2Q9NRA0 654 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.03□□□□□ -0.328e-10■■■□□ 15.9
CDK5RAP3-202ENST00000536708 PIH1D1Q9NWS0 290 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 SYBUQ9NX95 663 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 UBP1Q9NZI7 540 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 STOML1Q9UBI4 398 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TAGLN3Q9UI15 199 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ZMYM5Q9UJ78 669 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ILVBLA1L0T0 632 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ERI2A8K979 691 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 F8W8V4 182 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TPP1O14773 563 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 MUSKO15146 869 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 MATN3O15232 486 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 MTSS1O43312 755 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 AHCYL1O43865 530 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 PRAMEF11O60813 436 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 AP2A1O95782 977 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 PRKCGP05129 697 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TCF3P15923 654 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 POU3F3P20264 500 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 GRK2P25098 689 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 HLA-FP30511 346 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 PTDSS1P48651 473 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 YBEYP58557 167 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 LMAN2Q12907 356 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ACSBG2Q5FVE4 666 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 N4BP2L1Q5TBK1 243 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 SETD3Q86TU7 594 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TMEM135Q86UB9 458 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 WDR75Q8IWA0 830 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 PGBD5Q8N414 524 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 NAT16Q8N8M0 369 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 OR6Y1Q8NGX8 325 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 SPATA22Q8NHS9 363 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 PIWIL2Q8TC59 973 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 FGF14Q92915 247 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 MCUR1Q96AQ8 359 aa13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 GAS2L1Q99501 681 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-202ENST00000536708 IL12RB2Q99665 862 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms