RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 EID2Q8N6I1 236 aa13.23□□□□□ -0.29
PRKDC-206ENST00000536429 PAF1Q8N7H5 531 aa13.23□□□□□ -0.29
PRKDC-206ENST00000536429 CNTD1Q8N815 330 aa13.23□□□□□ -0.29
PRKDC-206ENST00000536429 ARRDC2Q8TBH0 407 aa13.23□□□□□ -0.29
PRKDC-206ENST00000536429 SPOCK2Q92563 424 aa13.23□□□□□ -0.29
PRKDC-206ENST00000536429 FATE1Q969F0 183 aa13.23□□□□□ -0.29
PRKDC-206ENST00000536429 HERPUD2Q9BSE4 406 aa13.23□□□□□ -0.29
PRKDC-206ENST00000536429 POLR1EQ9GZS1 481 aaKnown RBP13.23□□□□□ -0.29
PRKDC-206ENST00000536429 LUC7LQ9NQ29 371 aaKnown RBP13.23□□□□□ -0.29
PRKDC-206ENST00000536429 RAI2Q9Y5P3 530 aa13.23□□□□□ -0.29
PRKDC-206ENST00000536429 hCG_1818297A0A087WSY0 165 aa13.22□□□□□ -0.29
PRKDC-206ENST00000536429 SPTY2D1-AS1A0A0U1RR47 76 aa13.22□□□□□ -0.29
PRKDC-206ENST00000536429 GRID2IPA4D2P6 1211 aa13.22□□□□□ -0.29
PRKDC-206ENST00000536429 BTNL10A8MVZ5 291 aa13.22□□□□□ -0.29
PRKDC-206ENST00000536429 LZTS3O60299 673 aaPredicted RBP13.22□□□□□ -0.29
PRKDC-206ENST00000536429 FZD6O60353 706 aa13.22□□□□□ -0.29
PRKDC-206ENST00000536429 CST8O60676 142 aa13.22□□□□□ -0.29
PRKDC-206ENST00000536429 RECQL5O94762 991 aaPredicted RBP13.22□□□□□ -0.29
PRKDC-206ENST00000536429 PCCBP05166 539 aa13.22□□□□□ -0.29
PRKDC-206ENST00000536429 MMP2P08253 660 aa13.22□□□□□ -0.29
PRKDC-206ENST00000536429 ALPIP09923 528 aa13.22□□□□□ -0.29
PRKDC-206ENST00000536429 CTPS1P17812 591 aa13.22□□□□□ -0.29
PRKDC-206ENST00000536429 LHCGRP22888 699 aa13.22□□□□□ -0.29
PRKDC-206ENST00000536429 AP1B1Q10567 949 aa13.22□□□□□ -0.29
PRKDC-206ENST00000536429 EIF2B5Q13144 721 aaKnown RBP13.22□□□□□ -0.29
PRKDC-206ENST00000536429 CNGA3Q16281 694 aa13.22□□□□□ -0.29
PRKDC-206ENST00000536429 ODF2Q5BJF6 829 aa13.22□□□□□ -0.29
PRKDC-206ENST00000536429 KCTD16Q68DU8 428 aa13.22□□□□□ -0.29
PRKDC-206ENST00000536429 GLRX5Q86SX6 157 aa13.22□□□□□ -0.29
PRKDC-206ENST00000536429 TSPAN33Q86UF1 283 aa13.22□□□□□ -0.29
PRKDC-206ENST00000536429 CHCHD4Q8N4Q1 142 aa13.22□□□□□ -0.29
PRKDC-206ENST00000536429 LRRC57Q8N9N7 239 aa13.22□□□□□ -0.29
PRKDC-206ENST00000536429 PLA2G15Q8NCC3 412 aa13.22□□□□□ -0.29
PRKDC-206ENST00000536429 PIH1D2Q8WWB5 315 aa13.22□□□□□ -0.29
PRKDC-206ENST00000536429 FUBP1Q96AE4 644 aaKnown RBP13.22□□□□□ -0.29
PRKDC-206ENST00000536429 HAUS1Q96CS2 278 aa13.22□□□□□ -0.29
PRKDC-206ENST00000536429 ZNF830Q96NB3 372 aaPredicted RBP13.22□□□□□ -0.29
PRKDC-206ENST00000536429 IL12RB2Q99665 862 aa13.22□□□□□ -0.29
PRKDC-206ENST00000536429 TCEAL2Q9H3H9 227 aaPredicted RBP13.22□□□□□ -0.29
PRKDC-206ENST00000536429 DNAJC28Q9NX36 388 aa13.22□□□□□ -0.29
PRKDC-206ENST00000536429 AKAP13Q12802 2813 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 MACROD2A1Z1Q3 448 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 NPIPB15A6NHN6 443 aaPredicted RBP13.21□□□□□ -0.29
PRKDC-206ENST00000536429 TRIM38O00635 465 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 YKT6O15498 198 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 PIAS2O75928 621 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 IPO7O95373 1038 aaKnown RBP13.21□□□□□ -0.29
PRKDC-206ENST00000536429 PRLP01236 227 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 ELFN1P0C7U0 828 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 GIMD1P0DJR0 217 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 ZFXP17010 805 aaPredicted RBP13.21□□□□□ -0.29
PRKDC-206ENST00000536429 DGKAP23743 735 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 CTNNA1P35221 906 aaKnown RBP13.21□□□□□ -0.29
PRKDC-206ENST00000536429 NAP1L1P55209 391 aaKnown RBP13.21□□□□□ -0.29
PRKDC-206ENST00000536429 POLR2LP62875 67 aaKnown RBP13.21□□□□□ -0.29
PRKDC-206ENST00000536429 IFI35P80217 286 aaPredicted RBP13.21□□□□□ -0.29
PRKDC-206ENST00000536429 SHC2P98077 582 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 DNAJC3Q13217 504 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 INPP5AQ14642 412 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 LRRC14Q15048 493 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 PDK1Q15118 436 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 RALGPS1Q5JS13 557 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 ARMC12Q5T9G4 340 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 AADACL2Q6P093 401 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 RFLNAQ6ZTI6 216 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 KIAA1328Q86T90 577 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 PARGQ86W56 976 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 RBFAQ8N0V3 343 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 FAM174AQ8TBP5 190 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 CDC6Q99741 560 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 HEMGNQ9BXL5 484 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 TDRD1Q9BXT4 1180 aaKnown RBP13.21□□□□□ -0.29
PRKDC-206ENST00000536429 SEPT10Q9P0V9 454 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 KLK13Q9UKR3 277 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 ANGPTL2Q9UKU9 493 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 PHTF1Q9UMS5 762 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 CHKBQ9Y259 395 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 OR1A2Q9Y585 309 aa13.21□□□□□ -0.29
PRKDC-206ENST00000536429 ARID1BQ8NFD5 2236 aaPredicted RBP13.2□□□□□ -0.3
PRKDC-206ENST00000536429 SHROOM3Q8TF72 1996 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 K7ESM1 405 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 FFAR2O15552 330 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 TNFSF14O43557 240 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 NEBLO76041 1014 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 HEXIM1O94992 359 aaKnown RBP13.2□□□□□ -0.3
PRKDC-206ENST00000536429 ZRANB2O95218 330 aaKnown RBP eCLIP13.2□□□□□ -0.3
PRKDC-206ENST00000536429 CSF2P04141 144 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 MYF5P13349 255 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 NME1P15531 152 aaKnown RBP13.2□□□□□ -0.3
PRKDC-206ENST00000536429 VIPR1P32241 457 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 HNF1BP35680 557 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 CD86P42081 329 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 PEX5P50542 639 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 SKOR1P84550 965 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 ACOX1Q15067 660 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 AGERQ15109 404 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 PRKD1Q15139 912 aaPredicted RBP13.2□□□□□ -0.3
PRKDC-206ENST00000536429 CCDC157Q569K6 752 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 TFDP3Q5H9I0 405 aa13.2□□□□□ -0.3
PRKDC-206ENST00000536429 DENND2CQ68D51 928 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms