RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 SMOC2Q9H3U7 446 aa18.04■□□□□ 0.48
RAB40C-203ENST00000535977 NUP205Q92621 2012 aa18.04■□□□□ 0.48
RAB40C-203ENST00000535977 A0A0U1RQF3 1178 aa18.04■□□□□ 0.48
RAB40C-203ENST00000535977 MSX2P35548 267 aaPredicted RBP18.04■□□□□ 0.48
RAB40C-203ENST00000535977 IRF9Q00978 393 aa18.04■□□□□ 0.48
RAB40C-203ENST00000535977 PRKAA1Q13131 559 aa18.04■□□□□ 0.48
RAB40C-203ENST00000535977 SMAD1Q15797 465 aaKnown RBP18.04■□□□□ 0.48
RAB40C-203ENST00000535977 MANEALQ5VSG8 457 aa18.04■□□□□ 0.48
RAB40C-203ENST00000535977 OVOS1Q6IE37 1185 aa18.04■□□□□ 0.48
RAB40C-203ENST00000535977 OTOP3Q7RTS5 596 aa18.04■□□□□ 0.48
RAB40C-203ENST00000535977 GPR141Q7Z602 305 aa18.04■□□□□ 0.48
RAB40C-203ENST00000535977 ARHGAP12Q8IWW6 846 aa18.04■□□□□ 0.48
RAB40C-203ENST00000535977 SGF29Q96ES7 293 aa18.04■□□□□ 0.48
RAB40C-203ENST00000535977 C1QTNF1Q9BXJ1 281 aa18.04■□□□□ 0.48
RAB40C-203ENST00000535977 PRKD2Q9BZL6 878 aa18.04■□□□□ 0.48
RAB40C-203ENST00000535977 UBP1Q9NZI7 540 aa18.04■□□□□ 0.48
RAB40C-203ENST00000535977 CDC14AQ9UNH5 594 aa18.04■□□□□ 0.48
RAB40C-203ENST00000535977 NEU3Q9UQ49 428 aa18.04■□□□□ 0.48
RAB40C-203ENST00000535977 MYRFQ9Y2G1 1151 aa18.04■□□□□ 0.48
RAB40C-203ENST00000535977 ACOT9Q9Y305 439 aa18.04■□□□□ 0.48
RAB40C-203ENST00000535977 C7orf72A4D263 438 aa18.03■□□□□ 0.48
RAB40C-203ENST00000535977 HDAC3O15379 428 aa18.03■□□□□ 0.48
RAB40C-203ENST00000535977 MAFKO60675 156 aa18.03■□□□□ 0.48
RAB40C-203ENST00000535977 ATE1O95260 518 aa18.03■□□□□ 0.48
RAB40C-203ENST00000535977 INHBBP09529 407 aa18.03■□□□□ 0.48
RAB40C-203ENST00000535977 EPHA3P29320 983 aa18.03■□□□□ 0.48
RAB40C-203ENST00000535977 RPL14P50914 215 aaKnown RBP18.03■□□□□ 0.48
RAB40C-203ENST00000535977 DLG2Q15700 870 aa18.03■□□□□ 0.48
RAB40C-203ENST00000535977 NRF1Q16656 503 aa18.03■□□□□ 0.48
RAB40C-203ENST00000535977 CYP2A13Q16696 494 aa18.03■□□□□ 0.48
RAB40C-203ENST00000535977 NAPRTQ6XQN6 538 aa18.03■□□□□ 0.48
RAB40C-203ENST00000535977 SETD3Q86TU7 594 aaPredicted RBP18.03■□□□□ 0.48
RAB40C-203ENST00000535977 PDCD6IPQ8WUM4 868 aaKnown RBP18.03■□□□□ 0.48
RAB40C-203ENST00000535977 CNDP1Q96KN2 507 aa18.03■□□□□ 0.48
RAB40C-203ENST00000535977 RHOBTB2Q9BYZ6 727 aa18.03■□□□□ 0.48
RAB40C-203ENST00000535977 SIK2Q9H0K1 926 aa18.03■□□□□ 0.48
RAB40C-203ENST00000535977 UPF3AQ9H1J1 476 aaKnown RBP18.03■□□□□ 0.48
RAB40C-203ENST00000535977 TCF7L2Q9NQB0 619 aa18.03■□□□□ 0.48
RAB40C-203ENST00000535977 VPS45Q9NRW7 570 aa18.03■□□□□ 0.48
RAB40C-203ENST00000535977 GIN1Q9NXP7 522 aa18.03■□□□□ 0.48
RAB40C-203ENST00000535977 STK39Q9UEW8 545 aa18.03■□□□□ 0.48
RAB40C-203ENST00000535977 NOX1Q9Y5S8 564 aa18.03■□□□□ 0.48
RAB40C-203ENST00000535977 SULT1C4O75897 302 aa18.03■□□□□ 0.48
RAB40C-203ENST00000535977 COX4I1P13073 169 aa18.03■□□□□ 0.48
RAB40C-203ENST00000535977 GLDCP23378 1020 aa18.03■□□□□ 0.48
RAB40C-203ENST00000535977 NEK2P51955 445 aa18.03■□□□□ 0.48
RAB40C-203ENST00000535977 NKX3-2P78367 333 aa18.03■□□□□ 0.48
RAB40C-203ENST00000535977 CTU1Q7Z7A3 348 aaKnown RBP18.03■□□□□ 0.48
RAB40C-203ENST00000535977 STYXQ8WUJ0 223 aa18.03■□□□□ 0.48
RAB40C-203ENST00000535977 SUSD3Q96L08 255 aa18.03■□□□□ 0.48
RAB40C-203ENST00000535977 PAAF1Q9BRP4 392 aa18.03■□□□□ 0.48
RAB40C-203ENST00000535977 CDH7Q9ULB5 785 aa18.03■□□□□ 0.48
RAB40C-203ENST00000535977 SCN10AQ9Y5Y9 1956 aa18.03■□□□□ 0.48
RAB40C-203ENST00000535977 SHROOM3Q8TF72 1996 aa18.02■□□□□ 0.48
RAB40C-203ENST00000535977 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.02■□□□□ 0.48
RAB40C-203ENST00000535977 J3QRK9 145 aa18.02■□□□□ 0.48
RAB40C-203ENST00000535977 TNPO2O14787 897 aaKnown RBP18.02■□□□□ 0.48
RAB40C-203ENST00000535977 PAGE1O75459 146 aa18.02■□□□□ 0.48
RAB40C-203ENST00000535977 CTSHP09668 335 aa18.02■□□□□ 0.48
RAB40C-203ENST00000535977 PABPC1P11940 636 aaKnown RBP18.02■□□□□ 0.48
RAB40C-203ENST00000535977 KLF10Q13118 480 aa18.02■□□□□ 0.48
RAB40C-203ENST00000535977 CAMK2BQ13554 666 aa18.02■□□□□ 0.48
RAB40C-203ENST00000535977 FLOT2Q14254 428 aa18.02■□□□□ 0.48
RAB40C-203ENST00000535977 SEL1L3Q68CR1 1132 aa18.02■□□□□ 0.48
RAB40C-203ENST00000535977 SPATA2LQ8IUW3 424 aaPredicted RBP18.02■□□□□ 0.48
RAB40C-203ENST00000535977 FBXL8Q96CD0 374 aa18.02■□□□□ 0.48
RAB40C-203ENST00000535977 PGLYRP2Q96PD5 576 aa18.02■□□□□ 0.48
RAB40C-203ENST00000535977 HGH1Q9BTY7 390 aa18.02■□□□□ 0.48
RAB40C-203ENST00000535977 HIPK3Q9H422 1215 aa18.02■□□□□ 0.48
RAB40C-203ENST00000535977 TBC1D13Q9NVG8 400 aa18.02■□□□□ 0.48
RAB40C-203ENST00000535977 NCKIPSDQ9NZQ3 722 aa18.02■□□□□ 0.48
RAB40C-203ENST00000535977 PADI3Q9ULW8 664 aa18.02■□□□□ 0.48
RAB40C-203ENST00000535977 RUVBL2Q9Y230 463 aaKnown RBP18.02■□□□□ 0.48
RAB40C-203ENST00000535977 TCAF1Q9Y4C2 921 aa18.02■□□□□ 0.48
RAB40C-203ENST00000535977 E2F8A0AVK6 867 aa18.02■□□□□ 0.48
RAB40C-203ENST00000535977 MYADML2A6NDP7 307 aa18.02■□□□□ 0.48
RAB40C-203ENST00000535977 WASH4PA8MWX3 477 aa18.02■□□□□ 0.48
RAB40C-203ENST00000535977 AHSGP02765 367 aa18.02■□□□□ 0.48
RAB40C-203ENST00000535977 HOXD11P31277 338 aaPredicted RBP18.02■□□□□ 0.48
RAB40C-203ENST00000535977 ADRA1AP35348 466 aa18.02■□□□□ 0.48
RAB40C-203ENST00000535977 TXNL4AP83876 142 aaKnown RBP18.02■□□□□ 0.48
RAB40C-203ENST00000535977 DSC3Q14574 896 aa18.02■□□□□ 0.48
RAB40C-203ENST00000535977 USP33Q8TEY7 942 aa18.02■□□□□ 0.48
RAB40C-203ENST00000535977 RMND5BQ96G75 393 aaPredicted RBP18.02■□□□□ 0.48
RAB40C-203ENST00000535977 SCYL1Q96KG9 808 aa18.02■□□□□ 0.48
RAB40C-203ENST00000535977 AGO3Q9H9G7 860 aaKnown RBP18.02■□□□□ 0.48
RAB40C-203ENST00000535977 OLAHQ9NV23 265 aa18.02■□□□□ 0.48
RAB40C-203ENST00000535977 MRGBPQ9NV56 204 aa18.02■□□□□ 0.48
RAB40C-203ENST00000535977 SPO11Q9Y5K1 396 aa18.02■□□□□ 0.48
RAB40C-203ENST00000535977 FNDC1Q4ZHG4 1894 aaPredicted RBP18.02■□□□□ 0.47
RAB40C-203ENST00000535977 TRPM7Q96QT4 1865 aa18.02■□□□□ 0.47
RAB40C-203ENST00000535977 A0A087X1B8 175 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 DCXO43602 365 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 CD247P20963 164 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 SERPINB5P36952 375 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 ATXN3P54252 364 aaPredicted RBP18.01■□□□□ 0.47
RAB40C-203ENST00000535977 RAB10P61026 200 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 TUBA4AP68366 448 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 ILF2Q12905 390 aaKnown RBP18.01■□□□□ 0.47
RAB40C-203ENST00000535977 VWA5B1Q5TIE3 1220 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms