RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 GJC1P36383 396 aa8.91□□□□□ -0.98
CHD4-204ENST00000535810 SCNN1BP51168 640 aa8.91□□□□□ -0.98
CHD4-204ENST00000535810 RENBPP51606 427 aa8.91□□□□□ -0.98
CHD4-204ENST00000535810 TAS2R40P59535 323 aa8.91□□□□□ -0.98
CHD4-204ENST00000535810 AP1S1P61966 158 aa8.91□□□□□ -0.98
CHD4-204ENST00000535810 MMRN1Q13201 1228 aa8.91□□□□□ -0.98
CHD4-204ENST00000535810 DPYSL3Q14195 570 aa8.91□□□□□ -0.98
CHD4-204ENST00000535810 ZNF235Q14590 738 aa8.91□□□□□ -0.98
CHD4-204ENST00000535810 SMAD1Q15797 465 aaKnown RBP8.91□□□□□ -0.98
CHD4-204ENST00000535810 HADHQ16836 314 aaKnown RBP8.91□□□□□ -0.98
CHD4-204ENST00000535810 ATP13A4Q4VNC1 1196 aa8.91□□□□□ -0.98
CHD4-204ENST00000535810 ZNF542PQ5EBM4 170 aa8.91□□□□□ -0.98
CHD4-204ENST00000535810 CFAP58Q5T655 872 aa8.91□□□□□ -0.98
CHD4-204ENST00000535810 ERAP2Q6P179 960 aa8.91□□□□□ -0.98
CHD4-204ENST00000535810 DHRS13Q6UX07 377 aa8.91□□□□□ -0.98
CHD4-204ENST00000535810 TMPRSS7Q7RTY8 843 aa8.91□□□□□ -0.98
CHD4-204ENST00000535810 PDZD3Q86UT5 571 aa8.91□□□□□ -0.98
CHD4-204ENST00000535810 DCP2Q8IU60 420 aaKnown RBP8.91□□□□□ -0.98
CHD4-204ENST00000535810 PGBD5Q8N414 524 aa8.91□□□□□ -0.98
CHD4-204ENST00000535810 TP53I13Q8NBR0 393 aaPredicted RBP8.91□□□□□ -0.98
CHD4-204ENST00000535810 TRIM44Q96DX7 344 aaPredicted RBP8.91□□□□□ -0.98
CHD4-204ENST00000535810 NSMCE3Q96MG7 304 aa8.91□□□□□ -0.98
CHD4-204ENST00000535810 SPSB2Q99619 263 aa8.91□□□□□ -0.98
CHD4-204ENST00000535810 CHP1Q99653 195 aa8.91□□□□□ -0.98
CHD4-204ENST00000535810 MGME1Q9BQP7 344 aa8.91□□□□□ -0.98
CHD4-204ENST00000535810 ZNF670Q9BS34 389 aa8.91□□□□□ -0.98
CHD4-204ENST00000535810 C1QTNF7Q9BXJ2 289 aa8.91□□□□□ -0.98
CHD4-204ENST00000535810 NHEJ1Q9H9Q4 299 aaPredicted RBP8.91□□□□□ -0.98
CHD4-204ENST00000535810 SPTLC3Q9NUV7 552 aa8.91□□□□□ -0.98
CHD4-204ENST00000535810 DNAJC28Q9NX36 388 aa8.91□□□□□ -0.98
CHD4-204ENST00000535810 LCMT1Q9UIC8 334 aa8.91□□□□□ -0.98
CHD4-204ENST00000535810 KLF15Q9UIH9 416 aa8.91□□□□□ -0.98
CHD4-204ENST00000535810 PCDHGA1Q9Y5H4 931 aa8.91□□□□□ -0.98
CHD4-204ENST00000535810 PTPRBP23467 1997 aa8.91□□□□□ -0.98
CHD4-204ENST00000535810 PLXNB3Q9ULL4 1909 aa8.9□□□□□ -0.98
CHD4-204ENST00000535810 TTC24A2A3L6 582 aaPredicted RBP8.9□□□□□ -0.98
CHD4-204ENST00000535810 FFAR2O15552 330 aa8.9□□□□□ -0.98
CHD4-204ENST00000535810 SIGLEC6O43699 453 aa8.9□□□□□ -0.98
CHD4-204ENST00000535810 CSF2P04141 144 aa8.9□□□□□ -0.98
CHD4-204ENST00000535810 C1SP09871 688 aa8.9□□□□□ -0.98
CHD4-204ENST00000535810 CR2P20023 1033 aa8.9□□□□□ -0.98
CHD4-204ENST00000535810 HSPA9P38646 679 aaKnown RBP8.9□□□□□ -0.98
CHD4-204ENST00000535810 MMP13P45452 471 aa8.9□□□□□ -0.98
CHD4-204ENST00000535810 LIG3P49916 1009 aa8.9□□□□□ -0.98
CHD4-204ENST00000535810 HNRNPKP61978 463 aaKnown RBP eCLIP8.9□□□□□ -0.98
CHD4-204ENST00000535810 SEMG2Q02383 582 aa8.9□□□□□ -0.98
CHD4-204ENST00000535810 BCL2L1Q07817 233 aa8.9□□□□□ -0.98
CHD4-204ENST00000535810 GALNT2Q10471 571 aa8.9□□□□□ -0.98
CHD4-204ENST00000535810 RALGDSQ12967 914 aa8.9□□□□□ -0.98
CHD4-204ENST00000535810 EIF2B5Q13144 721 aaKnown RBP8.9□□□□□ -0.98
CHD4-204ENST00000535810 TBX2Q13207 712 aaPredicted RBP8.9□□□□□ -0.98
CHD4-204ENST00000535810 ZNF211Q13398 564 aaPredicted RBP8.9□□□□□ -0.98
CHD4-204ENST00000535810 IRF4Q15306 451 aa8.9□□□□□ -0.98
CHD4-204ENST00000535810 NR6A1Q15406 480 aa8.9□□□□□ -0.98
CHD4-204ENST00000535810 WSCD2Q2TBF2 565 aa8.9□□□□□ -0.98
CHD4-204ENST00000535810 NCBP2-AS2Q69YL0 99 aa8.9□□□□□ -0.98
CHD4-204ENST00000535810 SARM1Q6SZW1 724 aa8.9□□□□□ -0.98
CHD4-204ENST00000535810 NYAP1Q6ZVC0 841 aa8.9□□□□□ -0.98
CHD4-204ENST00000535810 PROSER1Q86XN7 944 aa8.9□□□□□ -0.98
CHD4-204ENST00000535810 MARCH9Q86YJ5 346 aa8.9□□□□□ -0.98
CHD4-204ENST00000535810 CNGA4Q8IV77 575 aa8.9□□□□□ -0.98
CHD4-204ENST00000535810 ZNF548Q8NEK5 533 aaPredicted RBP8.9□□□□□ -0.98
CHD4-204ENST00000535810 OR4C6Q8NH72 309 aa8.9□□□□□ -0.98
CHD4-204ENST00000535810 PCDH19Q8TAB3 1148 aa8.9□□□□□ -0.98
CHD4-204ENST00000535810 FAF2Q96CS3 445 aa8.9□□□□□ -0.98
CHD4-204ENST00000535810 CCDC42Q96M95 316 aa8.9□□□□□ -0.98
CHD4-204ENST00000535810 PRDM9Q9NQV7 894 aa8.9□□□□□ -0.98
CHD4-204ENST00000535810 MBNL1Q9NR56 388 aaKnown RBP8.9□□□□□ -0.98
CHD4-204ENST00000535810 COQ6Q9Y2Z9 468 aa8.9□□□□□ -0.98
CHD4-204ENST00000535810 ANKRD36A6QL64 1941 aa8.9□□□□□ -0.99
CHD4-204ENST00000535810 TDRD6O60522 2096 aaKnown RBP8.89□□□□□ -0.99
CHD4-204ENST00000535810 LRRK1Q38SD2 2015 aa8.89□□□□□ -0.99
CHD4-204ENST00000535810 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.89□□□□□ -0.99
CHD4-204ENST00000535810 FAM149AA5PLN7 773 aa8.89□□□□□ -0.99
CHD4-204ENST00000535810 EIF4E1BA6NMX2 242 aaKnown RBP8.89□□□□□ -0.99
CHD4-204ENST00000535810 TMEM110-MUSTN1A8MSY1 372 aa8.89□□□□□ -0.99
CHD4-204ENST00000535810 AKR1B15C9JRZ8 316 aaPredicted RBP8.89□□□□□ -0.99
CHD4-204ENST00000535810 H3BM21 787 aa8.89□□□□□ -0.99
CHD4-204ENST00000535810 SCAMP1O15126 338 aa8.89□□□□□ -0.99
CHD4-204ENST00000535810 HTRA2O43464 458 aaPredicted RBP8.89□□□□□ -0.99
CHD4-204ENST00000535810 SOCS5O75159 536 aa8.89□□□□□ -0.99
CHD4-204ENST00000535810 NEBLO76041 1014 aa8.89□□□□□ -0.99
CHD4-204ENST00000535810 MTA2O94776 668 aa8.89□□□□□ -0.99
CHD4-204ENST00000535810 MAP3K6O95382 1288 aa8.89□□□□□ -0.99
CHD4-204ENST00000535810 CAPNS1P04632 268 aa8.89□□□□□ -0.99
CHD4-204ENST00000535810 KRT7P08729 469 aa8.89□□□□□ -0.99
CHD4-204ENST00000535810 CDK4P11802 303 aa8.89□□□□□ -0.99
CHD4-204ENST00000535810 CKMT2P17540 419 aa8.89□□□□□ -0.99
CHD4-204ENST00000535810 GARSP41250 739 aaKnown RBP8.89□□□□□ -0.99
CHD4-204ENST00000535810 THOP1P52888 689 aa8.89□□□□□ -0.99
CHD4-204ENST00000535810 CLDN6P56747 220 aa8.89□□□□□ -0.99
CHD4-204ENST00000535810 MAXP61244 160 aa8.89□□□□□ -0.99
CHD4-204ENST00000535810 YPEL5P62699 121 aa8.89□□□□□ -0.99
CHD4-204ENST00000535810 POLR2LP62875 67 aaKnown RBP8.89□□□□□ -0.99
CHD4-204ENST00000535810 ILKQ13418 452 aa8.89□□□□□ -0.99
CHD4-204ENST00000535810 PTK2BQ14289 1009 aa8.89□□□□□ -0.99
CHD4-204ENST00000535810 LRRC14Q15048 493 aa8.89□□□□□ -0.99
CHD4-204ENST00000535810 PAFAH1B3Q15102 231 aaKnown RBP8.89□□□□□ -0.99
CHD4-204ENST00000535810 AGERQ15109 404 aa8.89□□□□□ -0.99
CHD4-204ENST00000535810 PDK2Q15119 407 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms