RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 GM2AP17900 193 aa11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 ITGB6P18564 788 aa11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 ANP32AP39687 249 aaKnown RBP11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 LIG3P49916 1009 aa11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 POLR2FP61218 127 aaKnown RBP11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 RALGDSQ12967 914 aa11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 C1orf61Q13536 156 aa11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 CDO1Q16878 200 aa11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 TSR1Q2NL82 804 aaKnown RBP11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 RALGPS1Q5JS13 557 aa11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 PLEKHA7Q6IQ23 1121 aa11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 LIPIQ6XZB0 460 aa11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 DPPA4Q7L190 304 aa11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 APTXQ7Z2E3 356 aaKnown RBP11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 B3GNT8Q7Z7M8 397 aa11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 NLRP8Q86W28 1048 aa11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 PYROXD2Q8N2H3 581 aa11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 RYBPQ8N488 228 aaPredicted RBP11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 FBXO39Q8N4B4 442 aa11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 KYQ8NBH2 561 aa11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 OR56A4Q8NGH8 313 aa11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 GPBAR1Q8TDU6 330 aa11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 CCDC74AQ96AQ1 378 aa11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 ZNF599Q96NL3 588 aa11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 ATP13A3Q9H7F0 1226 aa11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 TRNAU1APQ9NX07 287 aaKnown RBP11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 UBA2Q9UBT2 640 aaPredicted RBP11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 LIMA1Q9UHB6 759 aaKnown RBP11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 GPR34Q9UPC5 381 aa11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 PPIL1Q9Y3C6 166 aa11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 RP1L1Q8IWN7 2480 aaPredicted RBP11.28□□□□□ -0.6
CLSTN3-206ENST00000535668 USP9XQ93008 2570 aaPredicted RBP11.27□□□□□ -0.6
CLSTN3-206ENST00000535668 PMS2P1A4D2B8 440 aa11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 INSIG1O15503 277 aa11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 CCP110O43303 1012 aa11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 GJB6O95452 261 aa11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 TNFP01375 233 aa11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 CELA2BP08218 269 aaPredicted RBP11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 ITIH2P19823 946 aa11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 CR2P20023 1033 aa11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 SERPINA4P29622 427 aa11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 GPR3P46089 330 aa11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 AP1S1P61966 158 aa11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 RPL7AP62424 266 aaKnown RBP11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 CCL7P80098 99 aa11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 B4GALNT1Q00973 533 aa11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 LINC00303Q3SY05 128 aa11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 C14orf28Q4W4Y0 310 aa11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 SPRED1Q7Z699 444 aa11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 ZSWIM9Q86XI8 627 aa11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 ARHGAP12Q8IWW6 846 aa11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 MCOLN2Q8IZK6 566 aa11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 LZTR1Q8N653 840 aa11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 FUBP1Q96AE4 644 aaKnown RBP11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 SGF29Q96ES7 293 aa11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 NAF1Q96HR8 494 aaKnown RBP11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 COQ10AQ96MF6 247 aa11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 NCAPGQ9BPX3 1015 aa11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 SELENOOQ9BVL4 669 aa11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 TEX101Q9BY14 249 aa11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 PDP2Q9P2J9 529 aa11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 KLQ9UEF7 1012 aa11.27□□□□□ -0.61
CLSTN3-206ENST00000535668 ANKRD62A6NC57 917 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 TMEM202A6NGA9 273 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 ARHGAP42A6NI28 874 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 LGALS16A8MUM7 142 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 PSMD11O00231 422 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 TERTO14746 1132 aaKnown RBP11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 CASC3O15234 703 aaKnown RBP11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 SOCS5O75159 536 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 RECQL5O94762 991 aaPredicted RBP11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 WISP1O95388 367 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 RPLP0P05388 317 aaKnown RBP11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 CCDC172P0C7W6 258 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 GZMAP12544 262 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 CTSEP14091 401 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 HSPA9P38646 679 aaKnown RBP11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 CSRP3P50461 194 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 DPTQ07507 201 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 IL10RBQ08334 325 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 MAMLD1Q13495 774 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 TRA2AQ13595 282 aaKnown RBP eCLIP11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 PEX6Q13608 980 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 LY6DQ14210 128 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 FKBP15Q5T1M5 1219 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 ACAD10Q6JQN1 1059 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 ENPP7Q6UWV6 458 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 CYP4V2Q6ZWL3 525 aaPredicted RBP11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 IRF2BP2Q7Z5L9 587 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 SRLQ86TD4 932 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 CAMK1DQ8IU85 385 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 CCNJLQ8IV13 435 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 HID1Q8IV36 788 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 ARFGAP1Q8N6T3 406 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 EXD3Q8N9H8 876 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 OR1E3Q8WZA6 343 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 TSACCQ96A04 125 aaPredicted RBP11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 PDXPQ96GD0 296 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 MCCC1Q96RQ3 725 aaPredicted RBP11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 CMKLR1Q99788 373 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms