RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 ZFYVE26Q68DK2 2539 aa13.32□□□□□ -0.28
CLSTN3-205ENST00000535452 TSPAN11A1L157 253 aa13.32□□□□□ -0.28
CLSTN3-205ENST00000535452 GCATO75600 419 aa13.32□□□□□ -0.28
CLSTN3-205ENST00000535452 RPLP0P05388 317 aaKnown RBP13.32□□□□□ -0.28
CLSTN3-205ENST00000535452 ITGA2BP08514 1039 aa13.32□□□□□ -0.28
CLSTN3-205ENST00000535452 GZMAP12544 262 aa13.32□□□□□ -0.28
CLSTN3-205ENST00000535452 CA4P22748 312 aa13.32□□□□□ -0.28
CLSTN3-205ENST00000535452 SSR1P43307 286 aaKnown RBP13.32□□□□□ -0.28
CLSTN3-205ENST00000535452 CFHR1Q03591 330 aa13.32□□□□□ -0.28
CLSTN3-205ENST00000535452 MAMLD1Q13495 774 aa13.32□□□□□ -0.28
CLSTN3-205ENST00000535452 KRT81Q14533 505 aa13.32□□□□□ -0.28
CLSTN3-205ENST00000535452 TCEA2Q15560 299 aa13.32□□□□□ -0.28
CLSTN3-205ENST00000535452 BOLA3Q53S33 107 aa13.32□□□□□ -0.28
CLSTN3-205ENST00000535452 TDRD12Q587J7 1177 aaKnown RBP13.32□□□□□ -0.28
CLSTN3-205ENST00000535452 ATPAF2Q8N5M1 289 aa13.32□□□□□ -0.28
CLSTN3-205ENST00000535452 FAM46DQ8NEK8 389 aa13.32□□□□□ -0.28
CLSTN3-205ENST00000535452 FNIP1Q8TF40 1166 aa13.32□□□□□ -0.28
CLSTN3-205ENST00000535452 SLC46A1Q96NT5 459 aa13.32□□□□□ -0.28
CLSTN3-205ENST00000535452 CMKLR1Q99788 373 aa13.32□□□□□ -0.28
CLSTN3-205ENST00000535452 ARHGAP9Q9BRR9 750 aa13.32□□□□□ -0.28
CLSTN3-205ENST00000535452 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.32□□□□□ -0.28
CLSTN3-205ENST00000535452 SLC39A8Q9C0K1 460 aa13.32□□□□□ -0.28
CLSTN3-205ENST00000535452 LRRC19Q9H756 370 aa13.32□□□□□ -0.28
CLSTN3-205ENST00000535452 MYO1AQ9UBC5 1043 aa13.32□□□□□ -0.28
CLSTN3-205ENST00000535452 OR1A2Q9Y585 309 aa13.32□□□□□ -0.28
CLSTN3-205ENST00000535452 ENTPD2Q9Y5L3 495 aa13.32□□□□□ -0.28
CLSTN3-205ENST00000535452 RAI2Q9Y5P3 530 aa13.32□□□□□ -0.28
CLSTN3-205ENST00000535452 LRRC53A6NM62 1247 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 J3KR12 359 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 TNFRSF10CO14798 259 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 PLD2O14939 933 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 INSIG1O15503 277 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 TEX33O43247 280 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 RECQL5O94762 991 aaPredicted RBP13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 FTLP02792 175 aaPredicted RBP13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 GLB1P16278 677 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 ERCC2P18074 760 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 MMP12P39900 470 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 KIAA1024LP59773 190 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 TYRO3Q06418 890 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 ITKQ08881 620 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 ILF3Q12906 894 aaKnown RBP eCLIP13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 LBRQ14739 615 aaKnown RBP13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 ALG11Q2TAA5 492 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 WSCD2Q2TBF2 565 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 MAP9Q49MG5 647 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 ZFYVE27Q5T4F4 411 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 DENND2CQ68D51 928 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 USP45Q70EL2 814 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 RAB11FIP2Q7L804 512 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 NETO2Q8NC67 525 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 TSEN2Q8NCE0 465 aaKnown RBP13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 CCDC112Q8NEF3 446 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 CCDC74AQ96AQ1 378 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 WBP1Q96G27 269 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 LIN37Q96GY3 246 aaPredicted RBP13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 HIC2Q96JB3 615 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 SNRNP25Q9BV90 132 aaKnown RBP13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 GSDMCQ9BYG8 508 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 MAGEB5Q9BZ81 275 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 TCEAL2Q9H3H9 227 aaPredicted RBP13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 HAUS4Q9H6D7 363 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 NOL6Q9H6R4 1146 aaKnown RBP13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 GPATCH2LQ9NWQ4 482 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 NEU3Q9UQ49 428 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 BZW2Q9Y6E2 419 aaKnown RBP13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 DGKBQ9Y6T7 804 aa13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 TDRD6O60522 2096 aaKnown RBP13.31□□□□□ -0.28
CLSTN3-205ENST00000535452 LY6G6EA0A0G2JKS1 128 aa13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 RHPN2P1A8MT19 583 aa13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 B4DGG1 531 aa13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 SOCS5O75159 536 aa13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 CPP00450 1065 aa13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 ITIH2P19823 946 aa13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 MIPP30301 263 aa13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 HCAR3P49019 387 aa13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 EPHB1P54762 984 aa13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 PIGHQ14442 188 aaPredicted RBP13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 AGERQ15109 404 aa13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 HADHQ16836 314 aaKnown RBP13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 ANO6Q4KMQ2 910 aa13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 RALGPS1Q5JS13 557 aa13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 PERM1Q5SV97 790 aa13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 PLEKHA7Q6IQ23 1121 aa13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 CCNJLQ8IV13 435 aa13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 KYQ8NBH2 561 aa13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 HSPH1Q92598 858 aa13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 NUS1Q96E22 293 aa13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 BBC3Q96PG8 261 aaPredicted RBP13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 KLC2Q9H0B6 622 aa13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 LRRN3Q9H3W5 708 aa13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 STN1Q9H668 368 aaKnown RBP13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 PDFQ9HBH1 243 aa13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 CYP4F12Q9HCS2 524 aa13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 U3KQA8 63 aa13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 DSPP15924 2871 aaKnown RBP13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 DMXL2Q8TDJ6 3036 aa13.3□□□□□ -0.28
CLSTN3-205ENST00000535452 ZZEF1O43149 2961 aa13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 D6RAR5 112 aa13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 ATMINO43313 823 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms