RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 FAM46DQ8NEK8 389 aa13.97□□□□□ -0.17
CCDC84-208ENST00000534656 OR56A4Q8NGH8 313 aa13.97□□□□□ -0.17
CCDC84-208ENST00000534656 OR1E3Q8WZA6 343 aa13.97□□□□□ -0.17
CCDC84-208ENST00000534656 TMEM159Q96B96 161 aa13.97□□□□□ -0.17
CCDC84-208ENST00000534656 SGF29Q96ES7 293 aa13.97□□□□□ -0.17
CCDC84-208ENST00000534656 PDXPQ96GD0 296 aa13.97□□□□□ -0.17
CCDC84-208ENST00000534656 LRRC19Q9H756 370 aa13.97□□□□□ -0.17
CCDC84-208ENST00000534656 DONSONQ9NYP3 566 aa13.97□□□□□ -0.17
CCDC84-208ENST00000534656 ATP8A1Q9Y2Q0 1164 aa13.97□□□□□ -0.17
CCDC84-208ENST00000534656 LOXL2Q9Y4K0 774 aa13.97□□□□□ -0.17
CCDC84-208ENST00000534656 LRP4O75096 1905 aa13.96□□□□□ -0.17
CCDC84-208ENST00000534656 COL6A6A6NMZ7 2263 aa13.96□□□□□ -0.17
CCDC84-208ENST00000534656 ANKRD62A6NC57 917 aa13.96□□□□□ -0.17
CCDC84-208ENST00000534656 TMEM202A6NGA9 273 aa13.96□□□□□ -0.17
CCDC84-208ENST00000534656 CACNB4O00305 520 aaPredicted RBP13.96□□□□□ -0.17
CCDC84-208ENST00000534656 TNFRSF10CO14798 259 aa13.96□□□□□ -0.17
CCDC84-208ENST00000534656 PRAMEF11O60813 436 aa13.96□□□□□ -0.17
CCDC84-208ENST00000534656 RECQL5O94762 991 aaPredicted RBP13.96□□□□□ -0.17
CCDC84-208ENST00000534656 PRKCGP05129 697 aa13.96□□□□□ -0.17
CCDC84-208ENST00000534656 HOXC4P09017 264 aaPredicted RBP13.96□□□□□ -0.17
CCDC84-208ENST00000534656 ITIH1P19827 911 aa13.96□□□□□ -0.17
CCDC84-208ENST00000534656 HTR7P34969 479 aa13.96□□□□□ -0.17
CCDC84-208ENST00000534656 NDST2P52849 883 aa13.96□□□□□ -0.17
CCDC84-208ENST00000534656 RPL7AP62424 266 aaKnown RBP13.96□□□□□ -0.17
CCDC84-208ENST00000534656 NFATC3Q12968 1075 aa13.96□□□□□ -0.17
CCDC84-208ENST00000534656 SRSF6Q13247 344 aaKnown RBP13.96□□□□□ -0.17
CCDC84-208ENST00000534656 KRT31Q15323 416 aa13.96□□□□□ -0.17
CCDC84-208ENST00000534656 CERCAMQ5T4B2 595 aa13.96□□□□□ -0.17
CCDC84-208ENST00000534656 DNAJC24Q6P3W2 148 aa13.96□□□□□ -0.17
CCDC84-208ENST00000534656 MON1BQ7L1V2 547 aa13.96□□□□□ -0.17
CCDC84-208ENST00000534656 PRICKLE2Q7Z3G6 844 aa13.96□□□□□ -0.17
CCDC84-208ENST00000534656 SRLQ86TD4 932 aa13.96□□□□□ -0.17
CCDC84-208ENST00000534656 FUBP1Q96AE4 644 aaKnown RBP13.96□□□□□ -0.17
CCDC84-208ENST00000534656 MCEEQ96PE7 176 aa13.96□□□□□ -0.17
CCDC84-208ENST00000534656 CNPY3Q9BT09 278 aa13.96□□□□□ -0.17
CCDC84-208ENST00000534656 FAM117AQ9C073 453 aa13.96□□□□□ -0.17
CCDC84-208ENST00000534656 ATP13A3Q9H7F0 1226 aa13.96□□□□□ -0.17
CCDC84-208ENST00000534656 FGF22Q9HCT0 170 aa13.96□□□□□ -0.17
CCDC84-208ENST00000534656 MRPL40Q9NQ50 206 aaKnown RBP13.96□□□□□ -0.17
CCDC84-208ENST00000534656 SEPT10Q9P0V9 454 aa13.96□□□□□ -0.17
CCDC84-208ENST00000534656 LRIT1Q9P2V4 623 aa13.96□□□□□ -0.17
CCDC84-208ENST00000534656 RNF215Q9Y6U7 377 aa13.96□□□□□ -0.17
CCDC84-208ENST00000534656 LRRK1Q38SD2 2015 aa13.95□□□□□ -0.18
CCDC84-208ENST00000534656 ITGB2P05107 769 aa13.95□□□□□ -0.18
CCDC84-208ENST00000534656 TPM2P07951 284 aa13.95□□□□□ -0.18
CCDC84-208ENST00000534656 KELP23276 732 aa13.95□□□□□ -0.18
CCDC84-208ENST00000534656 SERPINA4P29622 427 aa13.95□□□□□ -0.18
CCDC84-208ENST00000534656 TRIM23P36406 574 aa13.95□□□□□ -0.18
CCDC84-208ENST00000534656 RGRP47804 291 aa13.95□□□□□ -0.18
CCDC84-208ENST00000534656 PAPOLAP51003 745 aaKnown RBP13.95□□□□□ -0.18
CCDC84-208ENST00000534656 TPI1P60174 286 aa13.95□□□□□ -0.18
CCDC84-208ENST00000534656 RALGDSQ12967 914 aa13.95□□□□□ -0.18
CCDC84-208ENST00000534656 ARHGEF7Q14155 803 aa13.95□□□□□ -0.18
CCDC84-208ENST00000534656 HLTFQ14527 1009 aaKnown RBP eCLIP13.95□□□□□ -0.18
CCDC84-208ENST00000534656 SYCP1Q15431 976 aa13.95□□□□□ -0.18
CCDC84-208ENST00000534656 C14orf28Q4W4Y0 310 aa13.95□□□□□ -0.18
CCDC84-208ENST00000534656 PPP1R15BQ5SWA1 713 aa13.95□□□□□ -0.18
CCDC84-208ENST00000534656 FKBP15Q5T1M5 1219 aa13.95□□□□□ -0.18
CCDC84-208ENST00000534656 CDKAL1Q5VV42 579 aa13.95□□□□□ -0.18
CCDC84-208ENST00000534656 LIPIQ6XZB0 460 aa13.95□□□□□ -0.18
CCDC84-208ENST00000534656 SPRED1Q7Z699 444 aa13.95□□□□□ -0.18
CCDC84-208ENST00000534656 SFTPA2Q8IWL1 248 aa13.95□□□□□ -0.18
CCDC84-208ENST00000534656 TSEN2Q8NCE0 465 aaKnown RBP13.95□□□□□ -0.18
CCDC84-208ENST00000534656 ENOX1Q8TC92 643 aaKnown RBP13.95□□□□□ -0.18
CCDC84-208ENST00000534656 EXTL1Q92935 676 aa13.95□□□□□ -0.18
CCDC84-208ENST00000534656 ECHDC3Q96DC8 303 aa13.95□□□□□ -0.18
CCDC84-208ENST00000534656 CELF6Q96J87 481 aaKnown RBP13.95□□□□□ -0.18
CCDC84-208ENST00000534656 CMKLR1Q99788 373 aa13.95□□□□□ -0.18
CCDC84-208ENST00000534656 ARHGAP9Q9BRR9 750 aa13.95□□□□□ -0.18
CCDC84-208ENST00000534656 SLC39A8Q9C0K1 460 aa13.95□□□□□ -0.18
CCDC84-208ENST00000534656 TMEM168Q9H0V1 697 aa13.95□□□□□ -0.18
CCDC84-208ENST00000534656 NUP62CLQ9H1M0 184 aa13.95□□□□□ -0.18
CCDC84-208ENST00000534656 SIK3Q9Y2K2 1263 aa13.95□□□□□ -0.18
CCDC84-208ENST00000534656 HEMK1Q9Y5R4 338 aaPredicted RBP13.95□□□□□ -0.18
CCDC84-208ENST00000534656 PRAMEF33A0A0G2JMD5 474 aa13.94□□□□□ -0.18
CCDC84-208ENST00000534656 ARHGAP42A6NI28 874 aa13.94□□□□□ -0.18
CCDC84-208ENST00000534656 B4DGG1 531 aa13.94□□□□□ -0.18
CCDC84-208ENST00000534656 NUDT21O43809 227 aaKnown RBP13.94□□□□□ -0.18
CCDC84-208ENST00000534656 PRAMEF10O60809 474 aa13.94□□□□□ -0.18
CCDC84-208ENST00000534656 PALMO75781 387 aa13.94□□□□□ -0.18
CCDC84-208ENST00000534656 ELFN1P0C7U0 828 aa13.94□□□□□ -0.18
CCDC84-208ENST00000534656 ETV5P41161 510 aa13.94□□□□□ -0.18
CCDC84-208ENST00000534656 POLR2LP62875 67 aaKnown RBP13.94□□□□□ -0.18
CCDC84-208ENST00000534656 BCL2L1Q07817 233 aa13.94□□□□□ -0.18
CCDC84-208ENST00000534656 MANEAQ5SRI9 462 aa13.94□□□□□ -0.18
CCDC84-208ENST00000534656 AFMIDQ63HM1 303 aa13.94□□□□□ -0.18
CCDC84-208ENST00000534656 SPECC1LQ69YQ0 1117 aa13.94□□□□□ -0.18
CCDC84-208ENST00000534656 TMPRSS9Q7Z410 1059 aa13.94□□□□□ -0.18
CCDC84-208ENST00000534656 ZFAND4Q86XD8 727 aa13.94□□□□□ -0.18
CCDC84-208ENST00000534656 SLITRK4Q8IW52 837 aa13.94□□□□□ -0.18
CCDC84-208ENST00000534656 CCL4L1Q8NHW4 92 aa13.94□□□□□ -0.18
CCDC84-208ENST00000534656 USP7Q93009 1102 aa13.94□□□□□ -0.18
CCDC84-208ENST00000534656 LGR4Q9BXB1 951 aa13.94□□□□□ -0.18
CCDC84-208ENST00000534656 DPEP2Q9H4A9 486 aa13.94□□□□□ -0.18
CCDC84-208ENST00000534656 CYP4F12Q9HCS2 524 aa13.94□□□□□ -0.18
CCDC84-208ENST00000534656 STARD5Q9NSY2 213 aa13.94□□□□□ -0.18
CCDC84-208ENST00000534656 SEPT11Q9NVA2 429 aaKnown RBP13.94□□□□□ -0.18
CCDC84-208ENST00000534656 A0A1W2PQC6 194 aa13.93□□□□□ -0.18
CCDC84-208ENST00000534656 CYSRT1A8MQ03 144 aa13.93□□□□□ -0.18
CCDC84-208ENST00000534656 C9orf172C9J069 976 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms