RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	EXTL1	Q92935	676 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	C3orf49	Q96BT1	292 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	WDYHV1	Q96HA8	205 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	LURAP1	Q96LR2	239 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SENP7	Q9BQF6	1050 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	PAAF1	Q9BRP4	392 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	TTPAL	Q9BTX7	342 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	BDH2	Q9BUT1	245 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	BRD8	Q9H0E9	1235 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	TMEM160	Q9NX00	188 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	MAP3K20	Q9NYL2	800 aa	Known RBP	4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	STEAP1	Q9UHE8	339 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	KCND3	Q9UK17	655 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	NUDC	Q9Y266	331 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	GPR75-ASB3	A0A0A6YYF3	556 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	CENPVL1	A0A0U1RR11	272 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	GXYLT2	A0PJZ3	443 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	FAM90A20P	A6NIJ5	464 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	VWC2L	B2RUY7	222 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442		M0QZQ0	153 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	MUSK	O15146	869 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	INPPL1	O15357	1258 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SLC16A3	O15427	465 aa	Known RBP	4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	HOXC11	O43248	304 aa	Predicted RBP	4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	CTIF	O43310	598 aa	Known RBP	4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	PROM1	O43490	865 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	EIF5B	O60841	1220 aa	Known RBP	4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	CD99	P14209	185 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	LIPA	P38571	399 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	CLCN2	P51788	898 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	GEMIN4	P57678	1058 aa	Known RBP	4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SLC14A1	Q13336	389 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	FAM90A2P	Q658T7	463 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	GRHL2	Q6ISB3	625 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	VWA1	Q6PCB0	445 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	DHRS13	Q6UX07	377 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SYT13	Q7L8C5	426 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	HEATR4	Q86WZ0	1026 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SLC34A3	Q8N130	599 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	LNX2	Q8N448	690 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	DNASE1L2	Q92874	299 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	FKBP10	Q96AY3	582 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SKA1	Q96BD8	255 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	CTHRC1	Q96CG8	243 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	R3HDM4	Q96D70	268 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	PTCD3	Q96EY7	689 aa	Known RBP	4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	C20orf173	Q96LM9	149 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	TWNK	Q96RR1	684 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SEC62	Q99442	399 aa	Known RBP	4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	PUS3	Q9BZE2	481 aa	Known RBP	4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	CWH43	Q9H720	699 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	CHODL	Q9H9P2	273 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	GLOD4	Q9HC38	313 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	UBN1	Q9NPG3	1134 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	TRIM36	Q9NQ86	728 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	RASSF1	Q9NS23	344 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	PCDHB7	Q9Y5E2	793 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	PIAS3	Q9Y6X2	628 aa		4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ATXN2	Q99700	1313 aa	Known RBP	4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	MTCL1	Q9Y4B5	1905 aa	Known RBP	4.85	□□□□□ -1.63
ECHDC1-223	ENST00000534442	KNTC1	P50748	2209 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	THADA	Q6YHU6	1953 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	COL4A2	P08572	1712 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	EPPK1	P58107	5090 aa	Known RBP	4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	LOC105369274	A0A096LPK9	316 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442		A0A0G2JK05	382 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	LOC102723532	A0A0G2JNH3	316 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442		A6NLC8	198 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	EFCAB8	A8MWE9	144 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442		M0QYT0	321 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SPRY2	O43597	315 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	RFPL2	O75678	378 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	HOXB7	P09629	217 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SFTPC	P11686	197 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	DRD1	P21728	446 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	CCNE1	P24864	410 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SERPINA4	P29622	427 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	LIFR	P42702	1097 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	CLCN4	P51793	760 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	CLDN6	P56747	220 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	NXPH1	P58417	271 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	RNASEL	Q05823	741 aa	Known RBP	4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	GFPT1	Q06210	699 aa	Predicted RBP	4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SF3A3	Q12874	501 aa	Known RBP eCLIP	4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SLC12A1	Q13621	1099 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	KCNJ12	Q14500	433 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	PPP2R5B	Q15173	497 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	RPS6KA2	Q15349	733 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	CDSN	Q15517	529 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	TBCC	Q15814	346 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	CCDC144NL	Q6NUI1	221 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	TATDN1	Q6P1N9	297 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	DPY19L3	Q6ZPD9	716 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	BBS12	Q6ZW61	710 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	MAATS1	Q7Z4T9	603 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	TEX11	Q8IYF3	940 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	OR4N4	Q8N0Y3	316 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	LRRC71	Q8N4P6	559 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	TTC9B	Q8N6N2	239 aa		4.84	□□□□□ -1.63

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