RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 TRAFD1O14545 582 aaPredicted RBP8.95□□□□□ -0.98
COPB1-211ENST00000534234 SERPING1P05155 500 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 PCCBP05166 539 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 ALPIP09923 528 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 ELFN1P0C7U0 828 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 PBX1P40424 430 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 GABREP78334 506 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 ZBED6P86452 979 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 RALGDSQ12967 914 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 MTM1Q13496 603 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 COL9A2Q14055 689 aaPredicted RBP8.95□□□□□ -0.98
COPB1-211ENST00000534234 ZNF235Q14590 738 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 TCEA2Q15560 299 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 NFKBIBQ15653 356 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 PERM1Q5SV97 790 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 TMCO4Q5TGY1 634 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 TXNRD3NBQ6F5E7 133 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 LVRNQ6Q4G3 990 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 NYAP1Q6ZVC0 841 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 SDR16C5Q8N3Y7 309 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 ATL2Q8NHH9 583 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 NAT6Q93015 286 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 GRAMD1AQ96CP6 724 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 BTBD6Q96KE9 485 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 WDR92Q96MX6 357 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 ZNF578Q96N58 590 aaPredicted RBP8.95□□□□□ -0.98
COPB1-211ENST00000534234 CSPG4P5Q96PW8 444 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 THAP2Q9H0W7 228 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.95□□□□□ -0.98
COPB1-211ENST00000534234 KLQ9UEF7 1012 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 IP6K2Q9UHH9 426 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 CAPN11Q9UMQ6 739 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 LUC7L2Q9Y383 392 aaKnown RBP8.95□□□□□ -0.98
COPB1-211ENST00000534234 PCDHGC4Q9Y5F7 938 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 RAI2Q9Y5P3 530 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 GOLGA4Q13439 2230 aaKnown RBP8.95□□□□□ -0.98
COPB1-211ENST00000534234 URB1O60287 2271 aaKnown RBP8.95□□□□□ -0.98
COPB1-211ENST00000534234 CACNA1GO43497 2377 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 A0A087X0T9 212 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 GOLGA6L19H0YKK7 550 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 MYO1FO00160 1098 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 CACNB4O00305 520 aaPredicted RBP8.95□□□□□ -0.98
COPB1-211ENST00000534234 MAFKO60675 156 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 DXOO77932 396 aaKnown RBP8.95□□□□□ -0.98
COPB1-211ENST00000534234 PEX11BO96011 259 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 TNFP01375 233 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 CYP1A2P05177 515 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 FAM228BP0C875 321 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 TRIM23P36406 574 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 HSPA9P38646 679 aaKnown RBP8.95□□□□□ -0.98
COPB1-211ENST00000534234 CCDC173Q0VFZ6 552 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 ACOX1Q15067 660 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 CCDC122Q5T0U0 273 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 ALKBH5Q6P6C2 394 aaKnown RBP8.95□□□□□ -0.98
COPB1-211ENST00000534234 RBM44Q6ZP01 1051 aaKnown RBP8.95□□□□□ -0.98
COPB1-211ENST00000534234 DPPA4Q7L190 304 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 GKN2Q86XP6 184 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 BBS5Q8N3I7 341 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 ZNF248Q8NDW4 579 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 PCDH19Q8TAB3 1148 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 WDR48Q8TAF3 677 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 PDCD6IPQ8WUM4 868 aaKnown RBP8.95□□□□□ -0.98
COPB1-211ENST00000534234 NSMCE1Q8WV22 266 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 TEKT4Q8WW24 435 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 FUBP1Q96AE4 644 aaKnown RBP8.95□□□□□ -0.98
COPB1-211ENST00000534234 IQCDQ96DY2 449 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 ATXN7L3BQ96GX2 97 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 NAF1Q96HR8 494 aaKnown RBP8.95□□□□□ -0.98
COPB1-211ENST00000534234 BBC3Q96PG8 261 aaPredicted RBP8.95□□□□□ -0.98
COPB1-211ENST00000534234 LGMNQ99538 433 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 CCDC3Q9BQI4 270 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 NUP85Q9BW27 656 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 NOD2Q9HC29 1040 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 PCDH18Q9HCL0 1135 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 SIRPGQ9P1W8 387 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 B4GALT6Q9UBX8 382 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 ANAPC7Q9UJX3 599 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 GPR34Q9UPC5 381 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 ENTPD2Q9Y5L3 495 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 DGKBQ9Y6T7 804 aa8.95□□□□□ -0.98
COPB1-211ENST00000534234 CELSR3Q9NYQ7 3312 aa8.94□□□□□ -0.98
COPB1-211ENST00000534234 KNTC1P50748 2209 aa8.94□□□□□ -0.98
COPB1-211ENST00000534234 DOCK9Q9BZ29 2069 aa8.94□□□□□ -0.98
COPB1-211ENST00000534234 A0A1W2PQ67 120 aa8.94□□□□□ -0.98
COPB1-211ENST00000534234 TMEM202A6NGA9 273 aa8.94□□□□□ -0.98
COPB1-211ENST00000534234 TNFRSF10CO14798 259 aa8.94□□□□□ -0.98
COPB1-211ENST00000534234 CASC3O15234 703 aaKnown RBP8.94□□□□□ -0.98
COPB1-211ENST00000534234 HTRA2O43464 458 aaPredicted RBP8.94□□□□□ -0.98
COPB1-211ENST00000534234 TCEA3O75764 348 aa8.94□□□□□ -0.98
COPB1-211ENST00000534234 HOXC4P09017 264 aaPredicted RBP8.94□□□□□ -0.98
COPB1-211ENST00000534234 GM2AP17900 193 aa8.94□□□□□ -0.98
COPB1-211ENST00000534234 CR2P20023 1033 aa8.94□□□□□ -0.98
COPB1-211ENST00000534234 KELP23276 732 aa8.94□□□□□ -0.98
COPB1-211ENST00000534234 IL4RP24394 825 aa8.94□□□□□ -0.98
COPB1-211ENST00000534234 RBMS1P29558 406 aaKnown RBP8.94□□□□□ -0.98
COPB1-211ENST00000534234 SERPINB6P35237 376 aa8.94□□□□□ -0.98
COPB1-211ENST00000534234 SSR1P43307 286 aaKnown RBP8.94□□□□□ -0.98
COPB1-211ENST00000534234 CDH6P55285 790 aa8.94□□□□□ -0.98
COPB1-211ENST00000534234 PCBP4P57723 403 aaKnown RBP8.94□□□□□ -0.98
COPB1-211ENST00000534234 ERVPABLB-1P60509 514 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms