RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 HTRA2O43464 458 aaPredicted RBP13.45□□□□□ -0.26
CAPN1-227ENST00000533909 PCDHGA12O60330 932 aa13.45□□□□□ -0.26
CAPN1-227ENST00000533909 PGLSO95336 258 aa13.45□□□□□ -0.26
CAPN1-227ENST00000533909 CCDC175P0C221 793 aa13.45□□□□□ -0.26
CAPN1-227ENST00000533909 TNNT3P45378 269 aaPredicted RBP13.45□□□□□ -0.26
CAPN1-227ENST00000533909 IFI35P80217 286 aaPredicted RBP13.45□□□□□ -0.26
CAPN1-227ENST00000533909 PDE1CQ14123 709 aaPredicted RBP13.45□□□□□ -0.26
CAPN1-227ENST00000533909 ARHGEF7Q14155 803 aa13.45□□□□□ -0.26
CAPN1-227ENST00000533909 PTK2BQ14289 1009 aa13.45□□□□□ -0.26
CAPN1-227ENST00000533909 FGL2Q14314 439 aa13.45□□□□□ -0.26
CAPN1-227ENST00000533909 PPP2R5EQ16537 467 aa13.45□□□□□ -0.26
CAPN1-227ENST00000533909 TAZQ16635 292 aa13.45□□□□□ -0.26
CAPN1-227ENST00000533909 DENND2CQ68D51 928 aa13.45□□□□□ -0.26
CAPN1-227ENST00000533909 ABI3BPQ7Z7G0 1075 aa13.45□□□□□ -0.26
CAPN1-227ENST00000533909 ZC3H18Q86VM9 953 aaKnown RBP13.45□□□□□ -0.26
CAPN1-227ENST00000533909 SPATS2Q86XZ4 545 aaKnown RBP13.45□□□□□ -0.26
CAPN1-227ENST00000533909 RNF10Q8N5U6 811 aaKnown RBP13.45□□□□□ -0.26
CAPN1-227ENST00000533909 CAMK1GQ96NX5 476 aa13.45□□□□□ -0.26
CAPN1-227ENST00000533909 AGAP3Q96P47 875 aa13.45□□□□□ -0.26
CAPN1-227ENST00000533909 OLFM3Q96PB7 478 aa13.45□□□□□ -0.26
CAPN1-227ENST00000533909 CDC6Q99741 560 aa13.45□□□□□ -0.26
CAPN1-227ENST00000533909 CEP41Q9BYV8 373 aa13.45□□□□□ -0.26
CAPN1-227ENST00000533909 DNAJC28Q9NX36 388 aa13.45□□□□□ -0.26
CAPN1-227ENST00000533909 SAE1Q9UBE0 346 aaPredicted RBP13.45□□□□□ -0.26
CAPN1-227ENST00000533909 B4GALT6Q9UBX8 382 aa13.45□□□□□ -0.26
CAPN1-227ENST00000533909 TRIM10Q9UDY6 481 aa13.45□□□□□ -0.26
CAPN1-227ENST00000533909 GUCA1BQ9UMX6 200 aa13.45□□□□□ -0.26
CAPN1-227ENST00000533909 SPAARA0A1B0GVQ0 90 aa13.44□□□□□ -0.26
CAPN1-227ENST00000533909 CFAP69A5D8W1 941 aa13.44□□□□□ -0.26
CAPN1-227ENST00000533909 GOLGA6L9A6NEM1 432 aa13.44□□□□□ -0.26
CAPN1-227ENST00000533909 H3BM21 787 aa13.44□□□□□ -0.26
CAPN1-227ENST00000533909 H7C0C1 242 aa13.44□□□□□ -0.26
CAPN1-227ENST00000533909 TJP3O95049 919 aa13.44□□□□□ -0.26
CAPN1-227ENST00000533909 PCCBP05166 539 aa13.44□□□□□ -0.26
CAPN1-227ENST00000533909 PECAM1P16284 738 aaPredicted RBP13.44□□□□□ -0.26
CAPN1-227ENST00000533909 CTPS1P17812 591 aa13.44□□□□□ -0.26
CAPN1-227ENST00000533909 EPHA8P29322 1005 aaPredicted RBP13.44□□□□□ -0.26
CAPN1-227ENST00000533909 VIPR1P32241 457 aa13.44□□□□□ -0.26
CAPN1-227ENST00000533909 CD86P42081 329 aa13.44□□□□□ -0.26
CAPN1-227ENST00000533909 ATP5OP48047 213 aa13.44□□□□□ -0.26
CAPN1-227ENST00000533909 ZBTB17Q13105 803 aa13.44□□□□□ -0.26
CAPN1-227ENST00000533909 IRF4Q15306 451 aa13.44□□□□□ -0.26
CAPN1-227ENST00000533909 TRIP6Q15654 476 aaKnown RBP13.44□□□□□ -0.26
CAPN1-227ENST00000533909 ALG1LQ6GMV1 187 aa13.44□□□□□ -0.26
CAPN1-227ENST00000533909 BBS12Q6ZW61 710 aa13.44□□□□□ -0.26
CAPN1-227ENST00000533909 B4GALNT4Q76KP1 1039 aa13.44□□□□□ -0.26
CAPN1-227ENST00000533909 GATAD2AQ86YP4 633 aa13.44□□□□□ -0.26
CAPN1-227ENST00000533909 LRRC8AQ8IWT6 810 aa13.44□□□□□ -0.26
CAPN1-227ENST00000533909 LRRC57Q8N9N7 239 aa13.44□□□□□ -0.26
CAPN1-227ENST00000533909 ALS2CR12Q96Q35 445 aa13.44□□□□□ -0.26
CAPN1-227ENST00000533909 KLF6Q99612 283 aaPredicted RBP13.44□□□□□ -0.26
CAPN1-227ENST00000533909 ADGRE3Q9BY15 652 aa13.44□□□□□ -0.26
CAPN1-227ENST00000533909 FTSJ1Q9UET6 329 aa13.44□□□□□ -0.26
CAPN1-227ENST00000533909 PCOLCE2Q9UKZ9 415 aa13.44□□□□□ -0.26
CAPN1-227ENST00000533909 DNPEPQ9ULA0 475 aa13.44□□□□□ -0.26
CAPN1-227ENST00000533909 ADGRG1Q9Y653 693 aa13.44□□□□□ -0.26
CAPN1-227ENST00000533909 ANKRD36A6QL64 1941 aa13.44□□□□□ -0.26
CAPN1-227ENST00000533909 DOCK9Q9BZ29 2069 aa13.44□□□□□ -0.26
CAPN1-227ENST00000533909 MED19A0JLT2 244 aaPredicted RBP13.43□□□□□ -0.26
CAPN1-227ENST00000533909 GOLGA6CA6NDK9 693 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 GOLGA6BA6NDN3 693 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 GOLGA8CPA6NN73 597 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 APOC4-APOC2K7ER74 178 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 TOR1BO14657 336 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 SDC3O75056 442 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 RECQL5O94762 991 aaPredicted RBP13.43□□□□□ -0.26
CAPN1-227ENST00000533909 STK10O94804 968 aaKnown RBP13.43□□□□□ -0.26
CAPN1-227ENST00000533909 FTCDO95954 541 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 APOC2P02655 101 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 GOLGA6DP0CG33 693 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 HTR1BP28222 390 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 RXRGP48443 463 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 YPEL5P62699 121 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 N4BP2L1Q5TBK1 243 aaPredicted RBP13.43□□□□□ -0.26
CAPN1-227ENST00000533909 CCDC70Q6NSX1 233 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 NT5DC3Q86UY8 548 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 PARGQ86W56 976 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 LPCAT1Q8NF37 534 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 ATL2Q8NHH9 583 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 SPOCK2Q92563 424 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 CENPTQ96BT3 561 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 IFT43Q96FT9 208 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 SCRN2Q96FV2 425 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 BMFQ96LC9 184 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 NSMCE3Q96MG7 304 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 IL12RB2Q99665 862 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 OSBPL8Q9BZF1 889 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 PCDH9Q9HC56 1237 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 KCTD5Q9NXV2 234 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 GOLGA6AQ9NYA3 693 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 KLHL8Q9P2G9 620 aaPredicted RBP13.43□□□□□ -0.26
CAPN1-227ENST00000533909 CHKBQ9Y259 395 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 DCHS1Q96JQ0 3298 aa13.43□□□□□ -0.26
CAPN1-227ENST00000533909 TMEM131Q92545 1883 aa13.42□□□□□ -0.26
CAPN1-227ENST00000533909 SPTY2D1-AS1A0A0U1RR47 76 aa13.42□□□□□ -0.26
CAPN1-227ENST00000533909 HACD1B0YJ81 288 aa13.42□□□□□ -0.26
CAPN1-227ENST00000533909 ADRB1P08588 477 aa13.42□□□□□ -0.26
CAPN1-227ENST00000533909 ALPIP09923 528 aa13.42□□□□□ -0.26
CAPN1-227ENST00000533909 ALPPL2P10696 532 aa13.42□□□□□ -0.26
CAPN1-227ENST00000533909 PTPN7P35236 360 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms