RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 OR2T34Q8NGX1 318 aa17.54■□□□□ 0.4
NXF1-216ENST00000533499 CCHCR1Q8TD31 782 aa17.54■□□□□ 0.4
NXF1-216ENST00000533499 ATOH1Q92858 354 aaPredicted RBP17.54■□□□□ 0.4
NXF1-216ENST00000533499 TADA1Q96BN2 335 aa17.54■□□□□ 0.4
NXF1-216ENST00000533499 TRIB3Q96RU7 358 aa17.54■□□□□ 0.4
NXF1-216ENST00000533499 C6orf106Q9H6K1 298 aaPredicted RBP17.54■□□□□ 0.4
NXF1-216ENST00000533499 PIH1D1Q9NWS0 290 aaKnown RBP17.54■□□□□ 0.4
NXF1-216ENST00000533499 PCDHGA2Q9Y5H1 932 aa17.54■□□□□ 0.4
NXF1-216ENST00000533499 THADAQ6YHU6 1953 aa17.53■□□□□ 0.4
NXF1-216ENST00000533499 A0A0J9YYE9 177 aa17.53■□□□□ 0.4
NXF1-216ENST00000533499 A0A0U1RQS6 177 aa17.53■□□□□ 0.4
NXF1-216ENST00000533499 A0A1W2PQU0 124 aa17.53■□□□□ 0.4
NXF1-216ENST00000533499 ANKRD66B4E2M5 251 aa17.53■□□□□ 0.4
NXF1-216ENST00000533499 RAD51CO43502 376 aa17.53■□□□□ 0.4
NXF1-216ENST00000533499 TSPAN6O43657 245 aa17.53■□□□□ 0.4
NXF1-216ENST00000533499 LZTS3O60299 673 aaPredicted RBP17.53■□□□□ 0.4
NXF1-216ENST00000533499 AP2A1O95782 977 aa17.53■□□□□ 0.4
NXF1-216ENST00000533499 IGLV3-19P01714 112 aa17.53■□□□□ 0.4
NXF1-216ENST00000533499 TRBC1P01850 177 aa17.53■□□□□ 0.4
NXF1-216ENST00000533499 VIPR1P32241 457 aa17.53■□□□□ 0.4
NXF1-216ENST00000533499 RPL26P61254 145 aaKnown RBP17.53■□□□□ 0.4
NXF1-216ENST00000533499 SEMA5AQ13591 1074 aa17.53■□□□□ 0.4
NXF1-216ENST00000533499 NAPEPLDQ6IQ20 393 aa17.53■□□□□ 0.4
NXF1-216ENST00000533499 C8orf74Q6P047 294 aa17.53■□□□□ 0.4
NXF1-216ENST00000533499 ZC3H14Q6PJT7 736 aaKnown RBP17.53■□□□□ 0.4
NXF1-216ENST00000533499 SYDE1Q6ZW31 735 aaPredicted RBP17.53■□□□□ 0.4
NXF1-216ENST00000533499 LPCAT2Q7L5N7 544 aa17.53■□□□□ 0.4
NXF1-216ENST00000533499 DNAAF3Q8N9W5 541 aa17.53■□□□□ 0.4
NXF1-216ENST00000533499 BLOC1S5Q8TDH9 187 aa17.53■□□□□ 0.4
NXF1-216ENST00000533499 HINFPQ9BQA5 517 aa17.53■□□□□ 0.4
NXF1-216ENST00000533499 RPL26L1Q9UNX3 145 aaKnown RBP17.53■□□□□ 0.4
NXF1-216ENST00000533499 SHOC2Q9UQ13 582 aa17.53■□□□□ 0.4
NXF1-216ENST00000533499 LOC285095A0A1B0GVY8 99 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 NPIPB15A6NHN6 443 aaPredicted RBP17.52■□□□□ 0.4
NXF1-216ENST00000533499 EFCAB8A8MWE9 144 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 FGF1P05230 155 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 ATXN1LP0C7T5 689 aaKnown RBP17.52■□□□□ 0.4
NXF1-216ENST00000533499 ELFN1P0C7U0 828 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 TPH1P17752 444 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 HLA-DPA1P20036 260 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 CNR2P34972 360 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 LIG3P49916 1009 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 PPP2CBP62714 309 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 PPP2CAP67775 309 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 ACOX1Q15067 660 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 ELF2Q15723 593 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 SLC1A5Q15758 541 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 SEL1L3Q68CR1 1132 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 KIAA0895LQ68EN5 471 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 DPPA4Q7L190 304 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 ZNF572Q7Z3I7 529 aaPredicted RBP17.52■□□□□ 0.4
NXF1-216ENST00000533499 LINC00523Q86TU6 105 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 TSPAN33Q86UF1 283 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 C11orf74Q86VG3 221 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 RGL4Q8IZJ4 473 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 ZBTB44Q8NCP5 570 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 OR52K1Q8NGK4 314 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 SLCO2A1Q92959 643 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 SCRN2Q96FV2 425 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 HSPA12BQ96MM6 686 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 MYOCQ99972 504 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 GPR63Q9BZJ6 419 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 MIR1-1HGQ9H1L0 117 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 DPH5Q9H2P9 285 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 PREBQ9HCU5 417 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 FAM86C1Q9NVL1 165 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 COQ6Q9Y2Z9 468 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 NEU2Q9Y3R4 380 aa17.52■□□□□ 0.4
NXF1-216ENST00000533499 CEP192Q8TEP8 1941 aa17.51■□□□□ 0.39
NXF1-216ENST00000533499 C1orf232A0A0U1RR37 186 aa17.51■□□□□ 0.39
NXF1-216ENST00000533499 FAM187AA6NFU0 413 aa17.51■□□□□ 0.39
NXF1-216ENST00000533499 IGLON5A6NGN9 336 aa17.51■□□□□ 0.39
NXF1-216ENST00000533499 CAPN8A6NHC0 703 aa17.51■□□□□ 0.39
NXF1-216ENST00000533499 ERI2A8K979 691 aaKnown RBP17.51■□□□□ 0.39
NXF1-216ENST00000533499 GOLGA8MH3BSY2 632 aa17.51■□□□□ 0.39
NXF1-216ENST00000533499 AREL1O15033 823 aa17.51■□□□□ 0.39
NXF1-216ENST00000533499 SLC31A1O15431 190 aa17.51■□□□□ 0.39
NXF1-216ENST00000533499 SPINT1O43278 529 aa17.51■□□□□ 0.39
NXF1-216ENST00000533499 AP1G1O43747 822 aa17.51■□□□□ 0.39
NXF1-216ENST00000533499 EPOP01588 193 aa17.51■□□□□ 0.39
NXF1-216ENST00000533499 C7P10643 843 aa17.51■□□□□ 0.39
NXF1-216ENST00000533499 ADRA1AP35348 466 aa17.51■□□□□ 0.39
NXF1-216ENST00000533499 MMP12P39900 470 aa17.51■□□□□ 0.39
NXF1-216ENST00000533499 TCF15Q12870 199 aa17.51■□□□□ 0.39
NXF1-216ENST00000533499 SGCGQ13326 291 aa17.51■□□□□ 0.39
NXF1-216ENST00000533499 SEPT6Q14141 434 aa17.51■□□□□ 0.39
NXF1-216ENST00000533499 IZUMO3Q5VZ72 239 aa17.51■□□□□ 0.39
NXF1-216ENST00000533499 HORMAD1Q86X24 394 aa17.51■□□□□ 0.39
NXF1-216ENST00000533499 NELL1Q92832 810 aa17.51■□□□□ 0.39
NXF1-216ENST00000533499 TRPM6Q9BX84 2022 aa17.51■□□□□ 0.39
NXF1-216ENST00000533499 RAB23Q9ULC3 237 aa17.51■□□□□ 0.39
NXF1-216ENST00000533499 TPX2Q9ULW0 747 aaKnown RBP17.51■□□□□ 0.39
NXF1-216ENST00000533499 SNX24Q9Y343 169 aa17.51■□□□□ 0.39
NXF1-216ENST00000533499 HCN4Q9Y3Q4 1203 aa17.51■□□□□ 0.39
NXF1-216ENST00000533499 SPO11Q9Y5K1 396 aa17.51■□□□□ 0.39
NXF1-216ENST00000533499 GON4LQ3T8J9 2241 aa17.51■□□□□ 0.39
NXF1-216ENST00000533499 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.5■□□□□ 0.39
NXF1-216ENST00000533499 TCRBV7S3A2A0A539 114 aa17.5■□□□□ 0.39
NXF1-216ENST00000533499 RHOBTB1O94844 696 aa17.5■□□□□ 0.39
NXF1-216ENST00000533499 CLDN7O95471 211 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms