RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 PDCD6IPQ8WUM4 868 aaKnown RBP15.53■□□□□ 0.08
CPSF1-211ENST00000533492 TSACCQ96A04 125 aaPredicted RBP15.53■□□□□ 0.08
CPSF1-211ENST00000533492 DEPDC7Q96QD5 511 aa15.53■□□□□ 0.08
CPSF1-211ENST00000533492 LRRC61Q9BV99 259 aa15.53■□□□□ 0.08
CPSF1-211ENST00000533492 XPO4Q9C0E2 1151 aaKnown RBP15.53■□□□□ 0.08
CPSF1-211ENST00000533492 SCUBE2Q9NQ36 999 aa15.53■□□□□ 0.08
CPSF1-211ENST00000533492 CTTNBP2NLQ9P2B4 639 aa15.53■□□□□ 0.08
CPSF1-211ENST00000533492 OR1A2Q9Y585 309 aa15.53■□□□□ 0.08
CPSF1-211ENST00000533492 U3KQA8 63 aa15.53■□□□□ 0.08
CPSF1-211ENST00000533492 TTC24A2A3L6 582 aaPredicted RBP15.52■□□□□ 0.08
CPSF1-211ENST00000533492 EME2A4GXA9 379 aaPredicted RBP15.52■□□□□ 0.08
CPSF1-211ENST00000533492 TRAFD1O14545 582 aaPredicted RBP15.52■□□□□ 0.08
CPSF1-211ENST00000533492 YY2O15391 372 aa15.52■□□□□ 0.08
CPSF1-211ENST00000533492 CBFA2T2O43439 604 aa15.52■□□□□ 0.08
CPSF1-211ENST00000533492 MAFKO60675 156 aa15.52■□□□□ 0.08
CPSF1-211ENST00000533492 RECQL5O94762 991 aaPredicted RBP15.52■□□□□ 0.08
CPSF1-211ENST00000533492 RASGRP1O95267 797 aa15.52■□□□□ 0.08
CPSF1-211ENST00000533492 ALPIP09923 528 aa15.52■□□□□ 0.08
CPSF1-211ENST00000533492 HK3P52790 923 aa15.52■□□□□ 0.08
CPSF1-211ENST00000533492 SLC25A11Q02978 314 aaKnown RBP15.52■□□□□ 0.08
CPSF1-211ENST00000533492 MTM1Q13496 603 aa15.52■□□□□ 0.08
CPSF1-211ENST00000533492 TSR1Q2NL82 804 aaKnown RBP15.52■□□□□ 0.08
CPSF1-211ENST00000533492 MARC1Q5VT66 337 aa15.52■□□□□ 0.08
CPSF1-211ENST00000533492 CDCP2Q5VXM1 449 aa15.52■□□□□ 0.08
CPSF1-211ENST00000533492 ESRP1Q6NXG1 681 aaKnown RBP15.52■□□□□ 0.08
CPSF1-211ENST00000533492 LRRC69Q6ZNQ3 347 aa15.52■□□□□ 0.08
CPSF1-211ENST00000533492 DPPA4Q7L190 304 aa15.52■□□□□ 0.08
CPSF1-211ENST00000533492 TPCN2Q8NHX9 752 aa15.52■□□□□ 0.08
CPSF1-211ENST00000533492 WDR92Q96MX6 357 aa15.52■□□□□ 0.08
CPSF1-211ENST00000533492 NUDCD1Q96RS6 583 aa15.52■□□□□ 0.08
CPSF1-211ENST00000533492 BOCQ9BWV1 1114 aa15.52■□□□□ 0.08
CPSF1-211ENST00000533492 DEF6Q9H4E7 631 aa15.52■□□□□ 0.08
CPSF1-211ENST00000533492 RCOR3Q9P2K3 495 aaPredicted RBP15.52■□□□□ 0.08
CPSF1-211ENST00000533492 KLQ9UEF7 1012 aa15.52■□□□□ 0.08
CPSF1-211ENST00000533492 PNMA8BQ9ULN7 279 aaPredicted RBP15.52■□□□□ 0.08
CPSF1-211ENST00000533492 PCDHGC4Q9Y5F7 938 aa15.52■□□□□ 0.08
CPSF1-211ENST00000533492 A0A087WV48 116 aa15.51■□□□□ 0.07
CPSF1-211ENST00000533492 CACNB4O00305 520 aaPredicted RBP15.51■□□□□ 0.07
CPSF1-211ENST00000533492 RRP8O43159 456 aaKnown RBP15.51■□□□□ 0.07
CPSF1-211ENST00000533492 SOCS5O75159 536 aa15.51■□□□□ 0.07
CPSF1-211ENST00000533492 CSO75390 466 aaKnown RBP15.51■□□□□ 0.07
CPSF1-211ENST00000533492 TNFP01375 233 aa15.51■□□□□ 0.07
CPSF1-211ENST00000533492 H2AFZP0C0S5 128 aa15.51■□□□□ 0.07
CPSF1-211ENST00000533492 ACTN2P35609 894 aa15.51■□□□□ 0.07
CPSF1-211ENST00000533492 GJC1P36383 396 aa15.51■□□□□ 0.07
CPSF1-211ENST00000533492 MMP13P45452 471 aa15.51■□□□□ 0.07
CPSF1-211ENST00000533492 SRP54P61011 504 aaKnown RBP15.51■□□□□ 0.07
CPSF1-211ENST00000533492 RALGDSQ12967 914 aa15.51■□□□□ 0.07
CPSF1-211ENST00000533492 MMRN1Q13201 1228 aa15.51■□□□□ 0.07
CPSF1-211ENST00000533492 ACOX1Q15067 660 aa15.51■□□□□ 0.07
CPSF1-211ENST00000533492 ALG11Q2TAA5 492 aa15.51■□□□□ 0.07
CPSF1-211ENST00000533492 C6orf132Q5T0Z8 1188 aa15.51■□□□□ 0.07
CPSF1-211ENST00000533492 GUSBP11Q6P575 273 aa15.51■□□□□ 0.07
CPSF1-211ENST00000533492 H2AFVQ71UI9 128 aa15.51■□□□□ 0.07
CPSF1-211ENST00000533492 GKN2Q86XP6 184 aa15.51■□□□□ 0.07
CPSF1-211ENST00000533492 LRRC49Q8IUZ0 686 aa15.51■□□□□ 0.07
CPSF1-211ENST00000533492 KCTD6Q8NC69 237 aa15.51■□□□□ 0.07
CPSF1-211ENST00000533492 CTNNBL1Q8WYA6 563 aaPredicted RBP15.51■□□□□ 0.07
CPSF1-211ENST00000533492 NAT6Q93015 286 aa15.51■□□□□ 0.07
CPSF1-211ENST00000533492 CLPBQ9H078 707 aa15.51■□□□□ 0.07
CPSF1-211ENST00000533492 NOD2Q9HC29 1040 aa15.51■□□□□ 0.07
CPSF1-211ENST00000533492 ZNHIT6Q9NWK9 470 aaKnown RBP15.51■□□□□ 0.07
CPSF1-211ENST00000533492 UVRAGQ9P2Y5 699 aa15.51■□□□□ 0.07
CPSF1-211ENST00000533492 GULP1Q9UBP9 304 aa15.51■□□□□ 0.07
CPSF1-211ENST00000533492 PCDHB1Q9Y5F3 818 aa15.51■□□□□ 0.07
CPSF1-211ENST00000533492 ASXL3Q9C0F0 2248 aa15.51■□□□□ 0.07
CPSF1-211ENST00000533492 ZFYVE26Q68DK2 2539 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 SHROOM3Q8TF72 1996 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 BRINP1O60477 761 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 USP12O75317 370 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 PEX11BO96011 259 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 CPP00450 1065 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 TPM1P09493 284 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 KELP23276 732 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 IL4RP24394 825 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 HNRNPH3P31942 346 aaKnown RBP15.5■□□□□ 0.07
CPSF1-211ENST00000533492 MAXP61244 160 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 ITKQ08881 620 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 TCEA2Q15560 299 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 RALGPS1Q5JS13 557 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 ZFYVE27Q5T4F4 411 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 LVRNQ6Q4G3 990 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 CRTC1Q6UUV9 634 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 PDZD3Q86UT5 571 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 MAP7D3Q8IWC1 876 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 SLC35F3Q8IY50 421 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 SDR16C5Q8N3Y7 309 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 PGBD5Q8N414 524 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 PLA2G15Q8NCC3 412 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 OR8K1Q8NGG5 319 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 FGF11Q92914 225 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 NSMCE3Q96MG7 304 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 MGME1Q9BQP7 344 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 NT5MQ9NPB1 228 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 B4GALT6Q9UBX8 382 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 PADI4Q9UM07 663 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 PHTF1Q9UMS5 762 aa15.5■□□□□ 0.07
CPSF1-211ENST00000533492 PDE2AO00408 941 aaPredicted RBP15.49■□□□□ 0.07
CPSF1-211ENST00000533492 HTRA2O43464 458 aaPredicted RBP15.49■□□□□ 0.07
CPSF1-211ENST00000533492 TLX3O43711 291 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms