RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 FARP1Q9Y4F1 1045 aaPredicted RBP8.35□□□□□ -1.07
NEDD8-207ENST00000533242 EXOC1LA0A1B0GW35 172 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 A0A1W2PPM1 405 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 RASA4BC9J798 803 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 ERVH48-1M5A8F1 160 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 RASA4O43374 803 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 BRINP1O60477 761 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 GRAP2O75791 330 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 ASLP04424 464 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 KDELR1P24390 212 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 MIPP30301 263 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 SSTR1P30872 391 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 GPD2P43304 727 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 RXRGP48443 463 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 ARRB1P49407 418 aaPredicted RBP8.35□□□□□ -1.07
NEDD8-207ENST00000533242 TKTL1P51854 596 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 NXPH1P58417 271 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 C15orf59Q2T9L4 293 aaPredicted RBP8.35□□□□□ -1.07
NEDD8-207ENST00000533242 TBC1D25Q3MII6 688 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 PRAMEF14Q5SWL7 426 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 MPP7Q5T2T1 576 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 NCEH1Q6PIU2 408 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 PCSK4Q6UW60 755 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 BHLHA9Q7RTU4 235 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 KANSL1Q7Z3B3 1105 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 TRABD2AQ86V40 505 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 C4orf33Q8N1A6 199 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 DYDC1Q8WWB3 177 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 CPT1BQ92523 772 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 TTC17Q96AE7 1141 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 THOC1Q96FV9 657 aaKnown RBP8.35□□□□□ -1.07
NEDD8-207ENST00000533242 FAXDC2Q96IV6 333 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 C12orf65Q9H3J6 166 aaKnown RBP8.35□□□□□ -1.07
NEDD8-207ENST00000533242 KDM4CQ9H3R0 1056 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 AASDHPPTQ9NRN7 309 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 SLC12A4Q9UP95 1085 aa8.35□□□□□ -1.07
NEDD8-207ENST00000533242 SETXQ7Z333 2677 aaKnown RBP8.34□□□□□ -1.07
NEDD8-207ENST00000533242 M0QYV0 167 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 GABBR2O75899 941 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 UBOX5O94941 541 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 MAP3K6O95382 1288 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 ZBED1O96006 694 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 CKMT2P17540 419 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 TAC1P20366 129 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 GLDCP23378 1020 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 CD70P32970 193 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 RPL22P35268 128 aaKnown RBP8.34□□□□□ -1.07
NEDD8-207ENST00000533242 SLC8A3P57103 927 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 ST8SIA6P61647 398 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 YWHAEP62258 255 aaKnown RBP8.34□□□□□ -1.07
NEDD8-207ENST00000533242 CXADRP78310 365 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 RHDQ02161 417 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 TLE3Q04726 772 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 PDIA2Q13087 525 aaKnown RBP8.34□□□□□ -1.07
NEDD8-207ENST00000533242 ITIH4Q14624 930 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 TAZQ16635 292 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 FAM47EQ6ZV65 393 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 TRPM8Q7Z2W7 1104 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 SPACA3Q8IXA5 215 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 DCBLD1Q8N8Z6 715 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 ANKRD52Q8NB46 1076 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 KDM1BQ8NB78 822 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 RNF139Q8WU17 664 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 HSPH1Q92598 858 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 LMLNQ96KR4 655 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 ULBP1Q9BZM6 244 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 EBF2Q9HAK2 575 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 PCDH9Q9HC56 1237 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 SLCO1B3Q9NPD5 702 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 SAMD15Q9P1V8 674 aa8.34□□□□□ -1.07
NEDD8-207ENST00000533242 DRG1Q9Y295 367 aaKnown RBP8.34□□□□□ -1.07
NEDD8-207ENST00000533242 A0A1W2PP55 124 aa8.34□□□□□ -1.08
NEDD8-207ENST00000533242 FAM47DPA6NHR8 397 aa8.34□□□□□ -1.08
NEDD8-207ENST00000533242 TLR4O00206 839 aa8.34□□□□□ -1.08
NEDD8-207ENST00000533242 ALOX15BO15296 676 aa8.34□□□□□ -1.08
NEDD8-207ENST00000533242 TBL1XO60907 577 aa8.34□□□□□ -1.08
NEDD8-207ENST00000533242 SIN3BO75182 1162 aa8.34□□□□□ -1.08
NEDD8-207ENST00000533242 ABHD2P08910 425 aa8.34□□□□□ -1.08
NEDD8-207ENST00000533242 ACP1P24666 158 aa8.34□□□□□ -1.08
NEDD8-207ENST00000533242 SGSHP51688 502 aa8.34□□□□□ -1.08
NEDD8-207ENST00000533242 COPS2P61201 443 aa8.34□□□□□ -1.08
NEDD8-207ENST00000533242 E2F1Q01094 437 aa8.34□□□□□ -1.08
NEDD8-207ENST00000533242 STAT4Q14765 748 aa8.34□□□□□ -1.08
NEDD8-207ENST00000533242 MORF4L2Q15014 288 aa8.34□□□□□ -1.08
NEDD8-207ENST00000533242 CST6Q15828 149 aa8.34□□□□□ -1.08
NEDD8-207ENST00000533242 HNRNPA1L2Q32P51 320 aaKnown RBP8.34□□□□□ -1.08
NEDD8-207ENST00000533242 ICE2Q659A1 982 aa8.34□□□□□ -1.08
NEDD8-207ENST00000533242 CYB5D1Q6P9G0 228 aa8.34□□□□□ -1.08
NEDD8-207ENST00000533242 BBS12Q6ZW61 710 aa8.34□□□□□ -1.08
NEDD8-207ENST00000533242 POLNQ7Z5Q5 900 aa8.34□□□□□ -1.08
NEDD8-207ENST00000533242 IGDCC3Q8IVU1 814 aa8.34□□□□□ -1.08
NEDD8-207ENST00000533242 AGGF1Q8N302 714 aaeCLIP8.34□□□□□ -1.08
NEDD8-207ENST00000533242 NAT8LQ8N9F0 302 aa8.34□□□□□ -1.08
NEDD8-207ENST00000533242 FAM71DQ8N9W8 422 aa8.34□□□□□ -1.08
NEDD8-207ENST00000533242 BBOF1Q8ND07 529 aa8.34□□□□□ -1.08
NEDD8-207ENST00000533242 WFDC5Q8TCV5 224 aa8.34□□□□□ -1.08
NEDD8-207ENST00000533242 MYO19Q96H55 970 aa8.34□□□□□ -1.08
NEDD8-207ENST00000533242 OMDQ99983 421 aa8.34□□□□□ -1.08
NEDD8-207ENST00000533242 MAGEB5Q9BZ81 275 aa8.34□□□□□ -1.08
NEDD8-207ENST00000533242 MTG2Q9H4K7 406 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms