RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 TRIM69Q86WT6 500 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 HORMAD1Q86X24 394 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 RGL4Q8IZJ4 473 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 SLC25A41Q8N5S1 370 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 GLIS1Q8NBF1 620 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 SPATA4Q8NEY3 305 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 BIRC7Q96CA5 298 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 LOXL4Q96JB6 756 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 HSPA12BQ96MM6 686 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 SRPK1Q96SB4 655 aaKnown RBP11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 FAM86C1Q9NVL1 165 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 B4GALT6Q9UBX8 382 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 PCYOX1Q9UHG3 505 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 ITM2BQ9Y287 266 aa11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC4-211ENST00000533012 IGLON5A6NGN9 336 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 ERI2A8K979 691 aaKnown RBP11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 LZTS3O60299 673 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 MMP20O60882 483 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 TM7SF2O76062 418 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 PAK4O96013 591 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 AGTP01019 485 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 IGHV4-34P06331 123 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 ALPIP09923 528 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 HLA-DPA1P20036 260 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 MAT2AP31153 395 aaKnown RBP11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 VIPR1P32241 457 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 PTGER3P43115 390 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 LIG3P49916 1009 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 SEMG2Q02383 582 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 GPS1Q13098 491 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 TRIP13Q15645 432 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 SLC1A5Q15758 541 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 LPAL2Q16609 132 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 ZNF284Q2VY69 593 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 SETMARQ53H47 684 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 FAXCQ5TGI0 409 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 RANBP10Q6VN20 620 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 SYDE1Q6ZW31 735 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 DPPA4Q7L190 304 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 ARMCX6Q7L4S7 300 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 LINC00523Q86TU6 105 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 SLC41A1Q8IVJ1 513 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 KLHDC8BQ8IXV7 354 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 PDCD7Q8N8D1 485 aaKnown RBP11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 CCHCR1Q8TD31 782 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 DNASE2BQ8WZ79 361 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 SNX19Q92543 992 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 MCCC1Q96RQ3 725 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 GORASP1Q9BQQ3 440 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 WRAP53Q9BUR4 548 aaKnown RBP11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 FICDQ9BVA6 458 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 SLC17A9Q9BYT1 436 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 LRRC40Q9H9A6 602 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 MAGEE1Q9HCI5 957 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 GGT7Q9UJ14 662 aa11.28□□□□□ -0.6
TRAPPC4-211ENST00000533012 A0A1W2PPC4 97 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 NPIPB15A6NHN6 443 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 SLC31A1O15431 190 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 SPINT1O43278 529 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 LATO43561 262 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 HEXIM1O94992 359 aaKnown RBP11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 AP2A1O95782 977 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 LMNAP02545 664 aaKnown RBP11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 FGF1P05230 155 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 APRTP07741 180 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 ATXN1LP0C7T5 689 aaKnown RBP11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 ELFN1P0C7U0 828 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 GNSP15586 552 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 ZNF30P17039 623 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 CD27P26842 260 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 MAOBP27338 520 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 ADRA1AP35348 466 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 MMP12P39900 470 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 ADCY8P40145 1251 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 DPP6P42658 865 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 VPS41P49754 854 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 PPP2CBP62714 309 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 PPP2CAP67775 309 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 BASP1P80723 227 aaKnown RBP11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 DR1Q01658 176 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 RALGDSQ12967 914 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 SEMA5AQ13591 1074 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 SPARCL1Q14515 664 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 ACOX1Q15067 660 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 PTPRRQ15256 657 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 TMEM259Q4ZIN3 620 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 SIRPB2Q5JXA9 342 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 SEL1L3Q68CR1 1132 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 KCTD11Q693B1 232 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 LAIR1Q6GTX8 287 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 NAPEPLDQ6IQ20 393 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 CRTC1Q6UUV9 634 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 LIPIQ6XZB0 460 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 MAATS1Q7Z4T9 603 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 MNS1Q8NEH6 495 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 ASB12Q8WXK4 309 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 KLK6Q92876 244 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 SLCO2A1Q92959 643 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 LYSMD1Q96S90 227 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms