RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 ACTL9Q8TC94 416 aa19.97■□□□□ 0.79
CPSF1-209ENST00000532725 ANP32BQ92688 251 aaKnown RBP19.97■□□□□ 0.79
CPSF1-209ENST00000532725 SCRN2Q96FV2 425 aa19.97■□□□□ 0.79
CPSF1-209ENST00000532725 TEKT5Q96M29 485 aa19.97■□□□□ 0.79
CPSF1-209ENST00000532725 AGAP3Q96P47 875 aa19.97■□□□□ 0.79
CPSF1-209ENST00000532725 DNAH14Q0VDD8 3507 aa19.97■□□□□ 0.79
CPSF1-209ENST00000532725 POM121BA6NF01 834 aa19.96■□□□□ 0.79
CPSF1-209ENST00000532725 MAGEC1O60732 1142 aa19.96■□□□□ 0.79
CPSF1-209ENST00000532725 ZNF883P0CG24 379 aa19.96■□□□□ 0.79
CPSF1-209ENST00000532725 C6P13671 934 aa19.96■□□□□ 0.79
CPSF1-209ENST00000532725 CD59P13987 128 aa19.96■□□□□ 0.79
CPSF1-209ENST00000532725 SKOR1P84550 965 aa19.96■□□□□ 0.79
CPSF1-209ENST00000532725 OTUD4Q01804 1114 aaKnown RBP19.96■□□□□ 0.79
CPSF1-209ENST00000532725 AGERQ15109 404 aa19.96■□□□□ 0.79
CPSF1-209ENST00000532725 PRAMEF14Q5SWL7 426 aa19.96■□□□□ 0.79
CPSF1-209ENST00000532725 MEI1Q5TIA1 1274 aa19.96■□□□□ 0.79
CPSF1-209ENST00000532725 CCDC181Q5TID7 509 aa19.96■□□□□ 0.79
CPSF1-209ENST00000532725 LIPIQ6XZB0 460 aa19.96■□□□□ 0.79
CPSF1-209ENST00000532725 DBX2Q6ZNG2 339 aa19.96■□□□□ 0.79
CPSF1-209ENST00000532725 CBARPQ8N350 705 aaPredicted RBP19.96■□□□□ 0.79
CPSF1-209ENST00000532725 PAF1Q8N7H5 531 aa19.96■□□□□ 0.79
CPSF1-209ENST00000532725 DENND6BQ8NEG7 585 aa19.96■□□□□ 0.79
CPSF1-209ENST00000532725 TADA1Q96BN2 335 aa19.96■□□□□ 0.79
CPSF1-209ENST00000532725 IMP4Q96G21 291 aaKnown RBP19.96■□□□□ 0.79
CPSF1-209ENST00000532725 QKIQ96PU8 341 aaKnown RBP eCLIP19.96■□□□□ 0.79
CPSF1-209ENST00000532725 TDRD1Q9BXT4 1180 aaKnown RBP19.96■□□□□ 0.79
CPSF1-209ENST00000532725 KCNF1Q9H3M0 494 aa19.96■□□□□ 0.79
CPSF1-209ENST00000532725 ERVMER34-1Q9H9K5 563 aa19.96■□□□□ 0.79
CPSF1-209ENST00000532725 B4GALT6Q9UBX8 382 aa19.96■□□□□ 0.79
CPSF1-209ENST00000532725 FNDC3AQ9Y2H6 1198 aaKnown RBP19.96■□□□□ 0.79
CPSF1-209ENST00000532725 COQ6Q9Y2Z9 468 aa19.96■□□□□ 0.79
CPSF1-209ENST00000532725 A8MX80 341 aa19.95■□□□□ 0.78
CPSF1-209ENST00000532725 MTSS1O43312 755 aa19.95■□□□□ 0.78
CPSF1-209ENST00000532725 DFNA5O60443 496 aa19.95■□□□□ 0.78
CPSF1-209ENST00000532725 CPP00450 1065 aa19.95■□□□□ 0.78
CPSF1-209ENST00000532725 THEGLP0DJG4 465 aa19.95■□□□□ 0.78
CPSF1-209ENST00000532725 CD68P34810 354 aaPredicted RBP19.95■□□□□ 0.78
CPSF1-209ENST00000532725 CD86P42081 329 aa19.95■□□□□ 0.78
CPSF1-209ENST00000532725 PTPRRQ15256 657 aa19.95■□□□□ 0.78
CPSF1-209ENST00000532725 Q6ZSR6 202 aa19.95■□□□□ 0.78
CPSF1-209ENST00000532725 TP53I13Q8NBR0 393 aaPredicted RBP19.95■□□□□ 0.78
CPSF1-209ENST00000532725 OR13H1Q8NG92 308 aa19.95■□□□□ 0.78
CPSF1-209ENST00000532725 HTR3CQ8WXA8 447 aa19.95■□□□□ 0.78
CPSF1-209ENST00000532725 MCCC1Q96RQ3 725 aaPredicted RBP19.95■□□□□ 0.78
CPSF1-209ENST00000532725 SLC25A51Q9H1U9 297 aa19.95■□□□□ 0.78
CPSF1-209ENST00000532725 C10orf88Q9H8K7 445 aa19.95■□□□□ 0.78
CPSF1-209ENST00000532725 GLOD4Q9HC38 313 aa19.95■□□□□ 0.78
CPSF1-209ENST00000532725 GDF3Q9NR23 364 aa19.95■□□□□ 0.78
CPSF1-209ENST00000532725 MBNL1Q9NR56 388 aaKnown RBP19.95■□□□□ 0.78
CPSF1-209ENST00000532725 TM7SF3Q9NS93 570 aa19.95■□□□□ 0.78
CPSF1-209ENST00000532725 CHKBQ9Y259 395 aa19.95■□□□□ 0.78
CPSF1-209ENST00000532725 H7C0C1 242 aa19.94■□□□□ 0.78
CPSF1-209ENST00000532725 FPGTO14772 594 aa19.94■□□□□ 0.78
CPSF1-209ENST00000532725 GM2AP17900 193 aa19.94■□□□□ 0.78
CPSF1-209ENST00000532725 ATP5OP48047 213 aa19.94■□□□□ 0.78
CPSF1-209ENST00000532725 KLF1Q13351 362 aaPredicted RBP19.94■□□□□ 0.78
CPSF1-209ENST00000532725 GSE1Q14687 1217 aa19.94■□□□□ 0.78
CPSF1-209ENST00000532725 SHBQ15464 509 aa19.94■□□□□ 0.78
CPSF1-209ENST00000532725 WSCD2Q2TBF2 565 aa19.94■□□□□ 0.78
CPSF1-209ENST00000532725 PIP4P1Q86T03 277 aa19.94■□□□□ 0.78
CPSF1-209ENST00000532725 RBM15Q96T37 977 aaKnown RBP eCLIP19.94■□□□□ 0.78
CPSF1-209ENST00000532725 VAT1Q99536 393 aa19.94■□□□□ 0.78
CPSF1-209ENST00000532725 ELF4Q99607 663 aaPredicted RBP19.94■□□□□ 0.78
CPSF1-209ENST00000532725 PCDH9Q9HC56 1237 aa19.94■□□□□ 0.78
CPSF1-209ENST00000532725 GPR27Q9NS67 375 aa19.94■□□□□ 0.78
CPSF1-209ENST00000532725 PCNX2A6NKB5 2137 aa19.93■□□□□ 0.78
CPSF1-209ENST00000532725 A0A1B0GTQ1 180 aa19.93■□□□□ 0.78
CPSF1-209ENST00000532725 A6NNZ2 444 aa19.93■□□□□ 0.78
CPSF1-209ENST00000532725 LZTS3O60299 673 aaPredicted RBP19.93■□□□□ 0.78
CPSF1-209ENST00000532725 CTPS1P17812 591 aa19.93■□□□□ 0.78
CPSF1-209ENST00000532725 RBL1P28749 1068 aa19.93■□□□□ 0.78
CPSF1-209ENST00000532725 VIPR1P32241 457 aa19.93■□□□□ 0.78
CPSF1-209ENST00000532725 HNF1BP35680 557 aa19.93■□□□□ 0.78
CPSF1-209ENST00000532725 RXRGP48443 463 aa19.93■□□□□ 0.78
CPSF1-209ENST00000532725 EIF3EP60228 445 aaKnown RBP19.93■□□□□ 0.78
CPSF1-209ENST00000532725 PFN3P60673 137 aa19.93■□□□□ 0.78
CPSF1-209ENST00000532725 RPL26P61254 145 aaKnown RBP19.93■□□□□ 0.78
CPSF1-209ENST00000532725 RPS6KA1Q15418 735 aa19.93■□□□□ 0.78
CPSF1-209ENST00000532725 KYAT3Q6YP21 454 aaKnown RBP19.93■□□□□ 0.78
CPSF1-209ENST00000532725 DCP2Q8IU60 420 aaKnown RBP19.93■□□□□ 0.78
CPSF1-209ENST00000532725 NDUFAF2Q8N183 169 aa19.93■□□□□ 0.78
CPSF1-209ENST00000532725 ZNF567Q8N184 647 aa19.93■□□□□ 0.78
CPSF1-209ENST00000532725 SLC22A18ASQ8N1D0 253 aa19.93■□□□□ 0.78
CPSF1-209ENST00000532725 TRIM58Q8NG06 486 aa19.93■□□□□ 0.78
CPSF1-209ENST00000532725 ALS2CR12Q96Q35 445 aa19.93■□□□□ 0.78
CPSF1-209ENST00000532725 SMIM14Q96QK8 99 aa19.93■□□□□ 0.78
CPSF1-209ENST00000532725 FAM118BQ9BPY3 351 aa19.93■□□□□ 0.78
CPSF1-209ENST00000532725 C1QTNF7Q9BXJ2 289 aa19.93■□□□□ 0.78
CPSF1-209ENST00000532725 USP29Q9HBJ7 922 aa19.93■□□□□ 0.78
CPSF1-209ENST00000532725 RPL26L1Q9UNX3 145 aaKnown RBP19.93■□□□□ 0.78
CPSF1-209ENST00000532725 PCDHGB2Q9Y5G2 931 aa19.93■□□□□ 0.78
CPSF1-209ENST00000532725 A0A0J9YYE9 177 aa19.92■□□□□ 0.78
CPSF1-209ENST00000532725 TCRBV7S2A1N4TA0A589 114 aa19.92■□□□□ 0.78
CPSF1-209ENST00000532725 NPIPB15A6NHN6 443 aaPredicted RBP19.92■□□□□ 0.78
CPSF1-209ENST00000532725 PCDHGA12O60330 932 aa19.92■□□□□ 0.78
CPSF1-209ENST00000532725 RECQL5O94762 991 aaPredicted RBP19.92■□□□□ 0.78
CPSF1-209ENST00000532725 HEXIM1O94992 359 aaKnown RBP19.92■□□□□ 0.78
CPSF1-209ENST00000532725 TRBC1P01850 177 aa19.92■□□□□ 0.78
CPSF1-209ENST00000532725 ALPIP09923 528 aa19.92■□□□□ 0.78
CPSF1-209ENST00000532725 ELFN1P0C7U0 828 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms