RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 MAGEB17A8MXT2 336 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 K7EPI3 171 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 MATN2O00339 956 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 O00370 1275 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 BIN1O00499 593 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 PPM1DO15297 605 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 SEC14L5O43304 696 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 TRUB2O95900 331 aaKnown RBP4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 MT-CYBP00156 380 aaPredicted RBP4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 ALDOCP09972 364 aaKnown RBP4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 SLC2A4P14672 509 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 MMP9P14780 707 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 ADRA2CP18825 462 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 DRD4P21917 467 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 ACHEP22303 614 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 TNFRSF8P28908 595 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 CYP2C18P33260 490 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 PSMC4P43686 418 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 SLC37A1P57057 533 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 HSD11B2P80365 405 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 OCA2Q04671 838 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 ZBTB16Q05516 673 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 ITIH3Q06033 890 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 PPP2R5BQ15173 497 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 SNAPC1Q16533 368 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 USP41Q3LFD5 358 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 C6orf141Q5SZD1 244 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 OLFM4Q6UX06 510 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 C11orf57Q6ZUT1 292 aaPredicted RBP4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 SPATA21Q7Z572 469 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 ABI3BPQ7Z7G0 1075 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 ATG4DQ86TL0 474 aaPredicted RBP4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 GPAT4Q86UL3 456 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 EXOC3L1Q86VI1 746 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 SYT12Q8IV01 421 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 C16orf71Q8IYS4 520 aaPredicted RBP4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 GPR135Q8IZ08 494 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 ADGRF3Q8IZF5 1079 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 CLYBLQ8N0X4 340 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 C12orf76Q8N812 135 aaPredicted RBP4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 MB21D1Q8N884 522 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 SCAIQ8N9R8 606 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 NHLRC2Q8NBF2 726 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 TXNDC5Q8NBS9 432 aaKnown RBP4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 GMCL1P1Q8NEA9 526 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 CEP76Q8TAP6 659 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 WIPF2Q8TF74 440 aaPredicted RBP4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 TEKT4Q8WW24 435 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 SLC13A3Q8WWT9 602 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 MBD6Q96DN6 1003 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 ZNF830Q96NB3 372 aaPredicted RBP4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 FAM111AQ96PZ2 611 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 SNX18Q96RF0 628 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 KCNK16Q96T55 309 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 PARK7Q99497 189 aaKnown RBP4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 SH3GL2Q99962 352 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 INPP5KQ9BT40 448 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 ACTRT3Q9BYD9 372 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 TPSD1Q9BZJ3 242 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 VPS33BQ9H267 617 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 NOL11Q9H8H0 719 aaKnown RBP4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 SEC61A2Q9H9S3 476 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 TUFT1Q9NNX1 390 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 TMEM74BQ9NUR3 256 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 HAO2Q9NYQ3 351 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 NINJ2Q9NZG7 142 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 UPB1Q9UBR1 384 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 CNOT8Q9UFF9 292 aaKnown RBP4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 OAZ3Q9UMX2 235 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 TRIM17Q9Y577 477 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 SPATA31A5Q5VU36 1347 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 SPATA31A6Q5VVP1 1343 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 SPATA31A7Q8IWB4 1347 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 SALL3Q9BXA9 1300 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 ZNF541Q9H0D2 1346 aa4.41□□□□□ -1.7
AC055878.1-201ENST00000531858 A0A1W2PR77 199 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 CLRN2A0PK11 232 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 MCF2LO15068 1137 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 CA12O43570 354 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 NXPH3O95157 252 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 LETM1O95202 739 aaPredicted RBP4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 PLA2G1BP04054 148 aaKnown RBP4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 GBAP04062 536 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 VIMP08670 466 aaKnown RBP4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 LINGO3P0C6S8 592 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 PCNAP12004 261 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 PEPDP12955 493 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 PDGFRAP16234 1089 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 CR2P20023 1033 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 TACR2P21452 398 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 TGM2P21980 687 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 SFPQP23246 707 aaKnown RBP eCLIP4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 EEF1B2P24534 225 aaKnown RBP4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 CDC25CP30307 473 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 PCGF2P35227 344 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 AGTR2P50052 363 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 ATXN3P54252 364 aaPredicted RBP4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 NXPH1P58417 271 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 SIRPAP78324 504 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 KCNJ10P78508 379 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms