RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 OR1E3Q8WZA6 343 aa18.54■□□□□ 0.56
SSSCA1-206ENST00000531405 ZNF641Q96N77 438 aaPredicted RBP18.54■□□□□ 0.56
SSSCA1-206ENST00000531405 CCNL2Q96S94 520 aaPredicted RBP18.54■□□□□ 0.56
SSSCA1-206ENST00000531405 RBM15Q96T37 977 aaKnown RBP eCLIP18.54■□□□□ 0.56
SSSCA1-206ENST00000531405 AGPAT1Q99943 283 aa18.54■□□□□ 0.56
SSSCA1-206ENST00000531405 SLC39A8Q9C0K1 460 aa18.54■□□□□ 0.56
SSSCA1-206ENST00000531405 LRRN3Q9H3W5 708 aa18.54■□□□□ 0.56
SSSCA1-206ENST00000531405 MRPL40Q9NQ50 206 aaKnown RBP18.54■□□□□ 0.56
SSSCA1-206ENST00000531405 ATXN7L1Q9ULK2 861 aaPredicted RBP18.54■□□□□ 0.56
SSSCA1-206ENST00000531405 TLN1Q9Y490 2541 aaKnown RBP18.53■□□□□ 0.56
SSSCA1-206ENST00000531405 TMEM202A6NGA9 273 aa18.53■□□□□ 0.56
SSSCA1-206ENST00000531405 B8ZZF3 427 aa18.53■□□□□ 0.56
SSSCA1-206ENST00000531405 TNFP01375 233 aa18.53■□□□□ 0.56
SSSCA1-206ENST00000531405 PAPOLAP51003 745 aaKnown RBP18.53■□□□□ 0.56
SSSCA1-206ENST00000531405 AIF1P55008 147 aa18.53■□□□□ 0.56
SSSCA1-206ENST00000531405 RALGDSQ12967 914 aa18.53■□□□□ 0.56
SSSCA1-206ENST00000531405 MTM1Q13496 603 aa18.53■□□□□ 0.56
SSSCA1-206ENST00000531405 AGERQ15109 404 aa18.53■□□□□ 0.56
SSSCA1-206ENST00000531405 CA9Q16790 459 aa18.53■□□□□ 0.56
SSSCA1-206ENST00000531405 SDK2Q58EX2 2172 aa18.53■□□□□ 0.56
SSSCA1-206ENST00000531405 DCUN1D2Q6PH85 259 aa18.53■□□□□ 0.56
SSSCA1-206ENST00000531405 BRAT1Q6PJG6 821 aa18.53■□□□□ 0.56
SSSCA1-206ENST00000531405 SRLQ86TD4 932 aa18.53■□□□□ 0.56
SSSCA1-206ENST00000531405 CCNJLQ8IV13 435 aa18.53■□□□□ 0.56
SSSCA1-206ENST00000531405 GPR156Q8NFN8 814 aa18.53■□□□□ 0.56
SSSCA1-206ENST00000531405 FUBP1Q96AE4 644 aaKnown RBP18.53■□□□□ 0.56
SSSCA1-206ENST00000531405 MED8Q96G25 268 aa18.53■□□□□ 0.56
SSSCA1-206ENST00000531405 STRADBQ9C0K7 418 aa18.53■□□□□ 0.56
SSSCA1-206ENST00000531405 FGF22Q9HCT0 170 aa18.53■□□□□ 0.56
SSSCA1-206ENST00000531405 A8MX80 341 aa18.52■□□□□ 0.56
SSSCA1-206ENST00000531405 RECQL5O94762 991 aaPredicted RBP18.52■□□□□ 0.56
SSSCA1-206ENST00000531405 NDST2P52849 883 aa18.52■□□□□ 0.56
SSSCA1-206ENST00000531405 EIF3IQ13347 325 aaKnown RBP18.52■□□□□ 0.56
SSSCA1-206ENST00000531405 ARHGAP36Q6ZRI8 547 aa18.52■□□□□ 0.56
SSSCA1-206ENST00000531405 TAF8Q7Z7C8 310 aa18.52■□□□□ 0.56
SSSCA1-206ENST00000531405 ATL2Q8NHH9 583 aa18.52■□□□□ 0.56
SSSCA1-206ENST00000531405 TUBGCP5Q96RT8 1024 aa18.52■□□□□ 0.56
SSSCA1-206ENST00000531405 ATP13A3Q9H7F0 1226 aa18.52■□□□□ 0.56
SSSCA1-206ENST00000531405 PISDQ9UG56 409 aa18.52■□□□□ 0.56
SSSCA1-206ENST00000531405 AP4E1Q9UPM8 1137 aa18.52■□□□□ 0.56
SSSCA1-206ENST00000531405 PCDHGA7Q9Y5G6 932 aa18.52■□□□□ 0.56
SSSCA1-206ENST00000531405 DGKBQ9Y6T7 804 aa18.52■□□□□ 0.56
SSSCA1-206ENST00000531405 MAST4O15021 2626 aa18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 HECTD1Q9ULT8 2610 aa18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 LGALS16A8MUM7 142 aa18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 B4DGG1 531 aa18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 EEF2KO00418 725 aaKnown RBP18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 NOBOXO60393 691 aa18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 PALMO75781 387 aa18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 JMJD7P0C870 316 aa18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 GM2AP17900 193 aa18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 ITIH1P19827 911 aa18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 SERPINA4P29622 427 aa18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 CCKBRP32239 447 aa18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 KIAA1024LP59773 190 aa18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 UBXN1Q04323 297 aa18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 LIPIQ6XZB0 460 aa18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 MCOLN2Q8IZK6 566 aa18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 PELI3Q8N2H9 469 aa18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 FAM46DQ8NEK8 389 aa18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 OR56A4Q8NGH8 313 aa18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 CCL4L1Q8NHW4 92 aa18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 NSMCE3Q96MG7 304 aa18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 TMEM74Q96NL1 305 aa18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 PEBP4Q96S96 227 aa18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 LGR4Q9BXB1 951 aa18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 TMEM168Q9H0V1 697 aa18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 DHX35Q9H5Z1 703 aaKnown RBP18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 TAS2R14Q9NYV8 317 aa18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 LOXL2Q9Y4K0 774 aa18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 RNF215Q9Y6U7 377 aa18.51■□□□□ 0.55
SSSCA1-206ENST00000531405 ARHGAP42A6NI28 874 aa18.5■□□□□ 0.55
SSSCA1-206ENST00000531405 TMX2-CTNND1H3BSU7 103 aa18.5■□□□□ 0.55
SSSCA1-206ENST00000531405 CACNB4O00305 520 aaPredicted RBP18.5■□□□□ 0.55
SSSCA1-206ENST00000531405 ATMINO43313 823 aaPredicted RBP18.5■□□□□ 0.55
SSSCA1-206ENST00000531405 ELFN1P0C7U0 828 aa18.5■□□□□ 0.55
SSSCA1-206ENST00000531405 CSNK1DP48730 415 aa18.5■□□□□ 0.55
SSSCA1-206ENST00000531405 CERCAMQ5T4B2 595 aa18.5■□□□□ 0.55
SSSCA1-206ENST00000531405 ACAD10Q6JQN1 1059 aa18.5■□□□□ 0.55
SSSCA1-206ENST00000531405 TMPRSS9Q7Z410 1059 aa18.5■□□□□ 0.55
SSSCA1-206ENST00000531405 SPRED1Q7Z699 444 aa18.5■□□□□ 0.55
SSSCA1-206ENST00000531405 ARHGAP12Q8IWW6 846 aa18.5■□□□□ 0.55
SSSCA1-206ENST00000531405 PAF1Q8N7H5 531 aa18.5■□□□□ 0.55
SSSCA1-206ENST00000531405 OR6C4Q8NGE1 309 aa18.5■□□□□ 0.55
SSSCA1-206ENST00000531405 ECHDC3Q96DC8 303 aa18.5■□□□□ 0.55
SSSCA1-206ENST00000531405 KCTD15Q96SI1 283 aaPredicted RBP18.5■□□□□ 0.55
SSSCA1-206ENST00000531405 CINPQ9BW66 212 aaPredicted RBP18.5■□□□□ 0.55
SSSCA1-206ENST00000531405 LIMA1Q9UHB6 759 aaKnown RBP18.5■□□□□ 0.55
SSSCA1-206ENST00000531405 PCSK1NQ9UHG2 260 aa18.5■□□□□ 0.55
SSSCA1-206ENST00000531405 MOSPD1Q9UJG1 213 aa18.5■□□□□ 0.55
SSSCA1-206ENST00000531405 COL12A1Q99715 3063 aa18.49■□□□□ 0.55
SSSCA1-206ENST00000531405 TTC24A2A3L6 582 aaPredicted RBP18.49■□□□□ 0.55
SSSCA1-206ENST00000531405 TMCO5BA8MYB1 307 aa18.49■□□□□ 0.55
SSSCA1-206ENST00000531405 DFFAO00273 331 aa18.49■□□□□ 0.55
SSSCA1-206ENST00000531405 GLB1P16278 677 aa18.49■□□□□ 0.55
SSSCA1-206ENST00000531405 PSMA2P25787 234 aa18.49■□□□□ 0.55
SSSCA1-206ENST00000531405 HTR7P34969 479 aa18.49■□□□□ 0.55
SSSCA1-206ENST00000531405 ETV5P41161 510 aa18.49■□□□□ 0.55
SSSCA1-206ENST00000531405 BCL2L1Q07817 233 aa18.49■□□□□ 0.55
SSSCA1-206ENST00000531405 C14orf28Q4W4Y0 310 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms