RNA–Protein interactions for RNA: ENST00000530917.5

UBASH3B-207, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 5

Gene UBASH3B, Length 987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-207ENST00000530917 PEX13Q92968 403 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 KLHL32Q96NJ5 620 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 FCRL3Q96P31 734 aaPredicted RBP12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 ZIM3Q96PE6 472 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 GABRG3Q99928 467 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 CCDC77Q9BR77 488 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 TMEM109Q9BVC6 243 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 TRABDQ9H4I3 376 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 PRSS16Q9NQE7 514 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 MOCS1Q9NZB8 636 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 WNT16Q9UBV4 365 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 RABGEF1Q9UJ41 708 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 PPM1HQ9ULR3 514 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 RPS6KL1Q9Y6S9 549 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 FAM169AQ9Y6X4 670 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 ZNF106Q9H2Y7 1883 aaKnown RBP12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 TCRBV9S1A1TA0A576 114 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 TCEA3O75764 348 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 ALDH1A2O94788 518 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 CRTAMO95727 393 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 SHBGP04278 402 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 BMP1P13497 986 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 PSMA3P25788 255 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 NMBRP28336 390 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 STX2P32856 288 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 SEC13P55735 322 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 CAMK2GQ13555 558 aaPredicted RBP12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 CCINQ13939 588 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 SEPT6Q14141 434 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 CRYMQ14894 314 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 TAF1AQ15573 450 aaPredicted RBP12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 HSF5Q4G112 596 aaPredicted RBP12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 C2orf27AQ580R0 203 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 TSTD2Q5T7W7 516 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 ZNF449Q6P9G9 518 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 CES3Q6UWW8 571 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 ZNF852Q6ZMS4 543 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 CAPN12Q6ZSI9 719 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 DSG4Q86SJ6 1040 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 ALYREFQ86V81 257 aaKnown RBP12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 ZSWIM9Q86XI8 627 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 PAF1Q8N7H5 531 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 MDGA1Q8NFP4 955 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 UHMK1Q8TAS1 419 aaKnown RBP12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 GRIN3AQ8TCU5 1115 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 BLOC1S5Q8TDH9 187 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 FBF1Q8TES7 1133 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 STYXQ8WUJ0 223 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 ZNF669Q96BR6 464 aaPredicted RBP12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 MFSD3Q96ES6 412 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 SCRN2Q96FV2 425 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 C19orf43Q9BQ61 176 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 ROPN1BQ9BZX4 212 aaPredicted RBP12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 ACBD3Q9H3P7 528 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 ACSS3Q9H6R3 686 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 ROPN1Q9HAT0 212 aaPredicted RBP12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 ZDHHC4Q9NPG8 344 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 TREX1Q9NSU2 369 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 SPO11Q9Y5K1 396 aa12.06□□□□□ -0.48
UBASH3B-207ENST00000530917 ZCWPW2A0A1B0GU75 182 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 C2orf81A6NN90 581 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 SYNCRIPO60506 623 aaKnown RBP12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 PIRTP0C851 137 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 TIMP2P16035 220 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 CTPS1P17812 591 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 LPOP22079 712 aaPredicted RBP12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 NFKBIAP25963 317 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 HNF1BP35680 557 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 ABL2P42684 1182 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 WASP42768 502 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 PDE1BQ01064 536 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 ACVR1Q04771 509 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 IFFO1Q0D2I5 559 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 UGP2Q16851 508 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 SKIDA1Q1XH10 827 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 ESRP1Q6NXG1 681 aaKnown RBP12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 CROCCP2Q86T23 111 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 UBALD2Q8IYN6 164 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 TTC30BQ8N4P2 665 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 IL17RCQ8NAC3 791 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 PIP4K2CQ8TBX8 421 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 SHDQ96IW2 340 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 PKNOX2Q96KN3 472 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 ZNF778Q96MU6 729 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 SMIM14Q96QK8 99 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 MCCC1Q96RQ3 725 aaPredicted RBP12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 LYSMD1Q96S90 227 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 CYTH2Q99418 400 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 TRIM56Q9BRZ2 755 aaKnown RBP12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 RSPH9Q9H1X1 276 aaPredicted RBP12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 PPCSQ9HAB8 311 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 FBRSQ9HAH7 460 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 FETUBQ9UGM5 382 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 SARDHQ9UL12 918 aa12.05□□□□□ -0.48
UBASH3B-207ENST00000530917 TRPM6Q9BX84 2022 aa12.04□□□□□ -0.48
UBASH3B-207ENST00000530917 CAPN8A6NHC0 703 aa12.04□□□□□ -0.48
UBASH3B-207ENST00000530917 FAM159BA6NKW6 160 aa12.04□□□□□ -0.48
UBASH3B-207ENST00000530917 C16orf96A6NNT2 1141 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms