RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 TTYH1Q9H313 450 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-213ENST00000530784 ABHD16BQ9H3Z7 469 aa7.51□□□□□ -1.21
CSDE1-213ENST00000530784 SLC38A10Q9HBR0 1119 aa7.51□□□□□ -1.21
CSDE1-213ENST00000530784 SLC8A2Q9UPR5 921 aa7.51□□□□□ -1.21
CSDE1-213ENST00000530784 LAMP3Q9UQV4 416 aa7.51□□□□□ -1.21
CSDE1-213ENST00000530784 ELP1O95163 1332 aa7.51□□□□□ -1.21
CSDE1-213ENST00000530784 COL11A1P12107 1806 aaPredicted RBP7.5□□□□□ -1.21
CSDE1-213ENST00000530784 DPPA5A6NC42 116 aa7.5□□□□□ -1.21
CSDE1-213ENST00000530784 EPN2O95208 641 aa7.5□□□□□ -1.21
CSDE1-213ENST00000530784 LARGE1O95461 756 aa7.5□□□□□ -1.21
CSDE1-213ENST00000530784 SCP2P22307 547 aa7.5□□□□□ -1.21
CSDE1-213ENST00000530784 IKQ13123 557 aaPredicted RBP7.5□□□□□ -1.21
CSDE1-213ENST00000530784 FHL1Q13642 323 aa7.5□□□□□ -1.21
CSDE1-213ENST00000530784 CCDC174Q6PII3 467 aa7.5□□□□□ -1.21
CSDE1-213ENST00000530784 C1orf228Q6PIY5 440 aa7.5□□□□□ -1.21
CSDE1-213ENST00000530784 LRIG3Q6UXM1 1119 aa7.5□□□□□ -1.21
CSDE1-213ENST00000530784 ARMCX2Q7L311 632 aa7.5□□□□□ -1.21
CSDE1-213ENST00000530784 ATG16L2Q8NAA4 619 aa7.5□□□□□ -1.21
CSDE1-213ENST00000530784 KLHDC9Q8NEP7 349 aa7.5□□□□□ -1.21
CSDE1-213ENST00000530784 NSMCE1Q8WV22 266 aa7.5□□□□□ -1.21
CSDE1-213ENST00000530784 ATP2A3Q93084 1043 aa7.5□□□□□ -1.21
CSDE1-213ENST00000530784 SLC25A28Q96A46 364 aa7.5□□□□□ -1.21
CSDE1-213ENST00000530784 RTKNQ9BST9 563 aa7.5□□□□□ -1.21
CSDE1-213ENST00000530784 WACQ9BTA9 647 aa7.5□□□□□ -1.21
CSDE1-213ENST00000530784 FSD1Q9BTV5 496 aa7.5□□□□□ -1.21
CSDE1-213ENST00000530784 SORBS1Q9BX66 1292 aaKnown RBP7.5□□□□□ -1.21
CSDE1-213ENST00000530784 NAPBQ9H115 298 aa7.5□□□□□ -1.21
CSDE1-213ENST00000530784 UPF3AQ9H1J1 476 aaKnown RBP7.5□□□□□ -1.21
CSDE1-213ENST00000530784 DCTPP1Q9H773 170 aa7.5□□□□□ -1.21
CSDE1-213ENST00000530784 ACAD9Q9H845 621 aa7.5□□□□□ -1.21
CSDE1-213ENST00000530784 MLXIPQ9HAP2 919 aa7.5□□□□□ -1.21
CSDE1-213ENST00000530784 TBX21Q9UL17 535 aa7.5□□□□□ -1.21
CSDE1-213ENST00000530784 DAAM1Q9Y4D1 1078 aa7.5□□□□□ -1.21
CSDE1-213ENST00000530784 MYH7P12883 1935 aa7.5□□□□□ -1.21
CSDE1-213ENST00000530784 TTC41PQ6P2S7 1318 aa7.5□□□□□ -1.21
CSDE1-213ENST00000530784 A0A0U1RQG5 324 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-213ENST00000530784 TMEM272A0A1B0GTI8 110 aa7.49□□□□□ -1.21
CSDE1-213ENST00000530784 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-213ENST00000530784 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-213ENST00000530784 CD8B2A6NJW9 211 aa7.49□□□□□ -1.21
CSDE1-213ENST00000530784 ATG13O75143 517 aa7.49□□□□□ -1.21
CSDE1-213ENST00000530784 NFATC1O95644 943 aa7.49□□□□□ -1.21
CSDE1-213ENST00000530784 TIMP1P01033 207 aa7.49□□□□□ -1.21
CSDE1-213ENST00000530784 ASGR1P07306 291 aa7.49□□□□□ -1.21
CSDE1-213ENST00000530784 CIITAP33076 1130 aa7.49□□□□□ -1.21
CSDE1-213ENST00000530784 SLC1A4P43007 532 aa7.49□□□□□ -1.21
CSDE1-213ENST00000530784 STAT2P52630 851 aa7.49□□□□□ -1.21
CSDE1-213ENST00000530784 FOXG1P55316 489 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-213ENST00000530784 PPIGQ13427 754 aaKnown RBP eCLIP7.49□□□□□ -1.21
CSDE1-213ENST00000530784 INPP5JQ15735 1006 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-213ENST00000530784 PIK3CD-AS1Q5SR53 167 aa7.49□□□□□ -1.21
CSDE1-213ENST00000530784 ATPAF1Q5TC12 328 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-213ENST00000530784 B4GALNT4Q76KP1 1039 aa7.49□□□□□ -1.21
CSDE1-213ENST00000530784 FAM160B2Q86V87 743 aa7.49□□□□□ -1.21
CSDE1-213ENST00000530784 DDIASQ8IXT1 998 aa7.49□□□□□ -1.21
CSDE1-213ENST00000530784 KAT2AQ92830 837 aa7.49□□□□□ -1.21
CSDE1-213ENST00000530784 NLRP4Q96MN2 994 aa7.49□□□□□ -1.21
CSDE1-213ENST00000530784 MPHOSPH6Q99547 160 aaKnown RBP7.49□□□□□ -1.21
CSDE1-213ENST00000530784 PLCB1Q9NQ66 1216 aa7.49□□□□□ -1.21
CSDE1-213ENST00000530784 RNF146Q9NTX7 359 aa7.49□□□□□ -1.21
CSDE1-213ENST00000530784 DECR2Q9NUI1 292 aa7.49□□□□□ -1.21
CSDE1-213ENST00000530784 COPG1Q9Y678 874 aaKnown RBP7.49□□□□□ -1.21
CSDE1-213ENST00000530784 DNAH12Q6ZR08 3092 aa7.49□□□□□ -1.21
CSDE1-213ENST00000530784 PLXNA1Q9UIW2 1896 aa7.49□□□□□ -1.21
CSDE1-213ENST00000530784 TTC3P53804 2025 aa7.49□□□□□ -1.21
CSDE1-213ENST00000530784 ASB14A6NK59 587 aa7.48□□□□□ -1.21
CSDE1-213ENST00000530784 TSPY2A6NKD2 308 aa7.48□□□□□ -1.21
CSDE1-213ENST00000530784 B4DGG1 531 aa7.48□□□□□ -1.21
CSDE1-213ENST00000530784 RHODO00212 210 aa7.48□□□□□ -1.21
CSDE1-213ENST00000530784 SYT5O00445 386 aa7.48□□□□□ -1.21
CSDE1-213ENST00000530784 TRIM38O00635 465 aa7.48□□□□□ -1.21
CSDE1-213ENST00000530784 CRYABP02511 175 aaKnown RBP7.48□□□□□ -1.21
CSDE1-213ENST00000530784 ITGA2BP08514 1039 aa7.48□□□□□ -1.21
CSDE1-213ENST00000530784 CSF2RAP15509 400 aa7.48□□□□□ -1.21
CSDE1-213ENST00000530784 SERPINF1P36955 418 aa7.48□□□□□ -1.21
CSDE1-213ENST00000530784 ALDH7A1P49419 539 aaKnown RBP7.48□□□□□ -1.21
CSDE1-213ENST00000530784 CDK7P50613 346 aa7.48□□□□□ -1.21
CSDE1-213ENST00000530784 TFAP4Q01664 338 aa7.48□□□□□ -1.21
CSDE1-213ENST00000530784 CNTN2Q02246 1040 aa7.48□□□□□ -1.21
CSDE1-213ENST00000530784 ISM2Q6H9L7 571 aa7.48□□□□□ -1.21
CSDE1-213ENST00000530784 PSRC1Q6PGN9 363 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-213ENST00000530784 MDGA2Q7Z553 956 aa7.48□□□□□ -1.21
CSDE1-213ENST00000530784 TLK2Q86UE8 772 aa7.48□□□□□ -1.21
CSDE1-213ENST00000530784 TMEM199Q8N511 208 aa7.48□□□□□ -1.21
CSDE1-213ENST00000530784 FAM133AQ8N9E0 248 aa7.48□□□□□ -1.21
CSDE1-213ENST00000530784 CHURC1Q8WUH1 139 aa7.48□□□□□ -1.21
CSDE1-213ENST00000530784 ADAD1Q96M93 576 aaKnown RBP7.48□□□□□ -1.21
CSDE1-213ENST00000530784 SEC62Q99442 399 aaKnown RBP7.48□□□□□ -1.21
CSDE1-213ENST00000530784 FAM234AQ9H0X4 552 aa7.48□□□□□ -1.21
CSDE1-213ENST00000530784 EBF3Q9H4W6 596 aa7.48□□□□□ -1.21
CSDE1-213ENST00000530784 LIN7CQ9NUP9 197 aaKnown RBP7.48□□□□□ -1.21
CSDE1-213ENST00000530784 DAPP1Q9UN19 280 aa7.48□□□□□ -1.21
CSDE1-213ENST00000530784 STX8Q9UNK0 236 aa7.48□□□□□ -1.21
CSDE1-213ENST00000530784 LZTS1Q9Y250 596 aa7.48□□□□□ -1.21
CSDE1-213ENST00000530784 FAM90A10PA6NDY2 464 aa7.47□□□□□ -1.21
CSDE1-213ENST00000530784 AGAP5A6NIR3 686 aa7.47□□□□□ -1.21
CSDE1-213ENST00000530784 A6NNC1 897 aa7.47□□□□□ -1.21
CSDE1-213ENST00000530784 CTAGE5O15320 804 aa7.47□□□□□ -1.21
CSDE1-213ENST00000530784 CABYRO75952 493 aa7.47□□□□□ -1.21
CSDE1-213ENST00000530784 ACTL6BO94805 426 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms