RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 CCDC151A5D8V7 595 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 PRR23AA6NEV1 266 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 SDR42E2A6NKP2 422 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 ANKRD66B4E2M5 251 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 SMAPO00193 183 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 NPC1O15118 1278 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 PPFIA2O75334 1257 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 ERLIN1O75477 346 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 TIMP2P16035 220 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 SSTR1P30872 391 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 HNF1BP35680 557 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 RPS14P62263 151 aaKnown RBP10.7□□□□□ -0.7
SOX6-213ENST00000530378 CNTN1Q12860 1018 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 FZD5Q13467 585 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 BRD3Q15059 726 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 CST6Q15828 149 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 SLC14A2Q15849 920 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 EOGTQ5NDL2 527 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 GLT6D1Q7Z4J2 308 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 DSG4Q86SJ6 1040 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 FAM124AQ86V42 546 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 PLPP6Q8IY26 295 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 AADATQ8N5Z0 425 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 PPHLN1Q8NEY8 458 aaKnown RBP10.7□□□□□ -0.7
SOX6-213ENST00000530378 MDGA1Q8NFP4 955 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 PJA1Q8NG27 643 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 OR2T3Q8NH03 318 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 PYROXD1Q8WU10 500 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 ZNF669Q96BR6 464 aaPredicted RBP10.7□□□□□ -0.7
SOX6-213ENST00000530378 ECHDC3Q96DC8 303 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 ZNF641Q96N77 438 aaPredicted RBP10.7□□□□□ -0.7
SOX6-213ENST00000530378 OSBPL1AQ9BXW6 950 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 RSPH9Q9H1X1 276 aaPredicted RBP10.7□□□□□ -0.7
SOX6-213ENST00000530378 VPS37BQ9H9H4 285 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 BPIFA1Q9NP55 256 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 PCDH12Q9NPG4 1184 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 DYRK4Q9NR20 520 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 B4GALT6Q9UBX8 382 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 ZC3H7BQ9UGR2 993 aaKnown RBP10.7□□□□□ -0.7
SOX6-213ENST00000530378 ZNF711Q9Y462 761 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 CACNA1IQ9P0X4 2223 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 A0A0J9YYE9 177 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 C1orf232A0A0U1RR37 186 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 CAPN8A6NHC0 703 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 UPK3BL1B0FP48 263 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 GOLGA8KD6RF30 607 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 UPK3BL2E5RIL1 263 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 E7ESA3 106 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 C1QTNF3-AMACRE9PGA6 284 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 GOLGA8TH3BQL2 631 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 RNASEH1O60930 286 aaKnown RBP10.69□□□□□ -0.7
SOX6-213ENST00000530378 RNASEH2AO75792 299 aaKnown RBP10.69□□□□□ -0.7
SOX6-213ENST00000530378 TRBC1P01850 177 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 MLNP12872 115 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 H2AFXP16104 143 aaPredicted RBP10.69□□□□□ -0.7
SOX6-213ENST00000530378 NDUFV2P19404 249 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 ITGB7P26010 798 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 NMBRP28336 390 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 GRIA4P48058 902 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 PXNP49023 591 aaPredicted RBP10.69□□□□□ -0.7
SOX6-213ENST00000530378 PMS2P54278 862 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 GRM3Q14832 879 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 CRY1Q16526 586 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 UGP2Q16851 508 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 MAP9Q49MG5 647 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 ZNF776Q68DI1 518 aaPredicted RBP10.69□□□□□ -0.7
SOX6-213ENST00000530378 ANO7Q6IWH7 933 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 EMBQ6PCB8 327 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 FBXL19Q6PCT2 694 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 UNC5AQ6ZN44 842 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 TTC7BQ86TV6 843 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 TMPRSS6Q8IU80 811 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 PGBD3Q8N328 593 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 MRRFQ96E11 262 aaKnown RBP10.69□□□□□ -0.7
SOX6-213ENST00000530378 MFSD3Q96ES6 412 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 WRAP53Q9BUR4 548 aaKnown RBP10.69□□□□□ -0.7
SOX6-213ENST00000530378 FAM129AQ9BZQ8 928 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 IL22Q9GZX6 179 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.69□□□□□ -0.7
SOX6-213ENST00000530378 BCCIPQ9P287 314 aaKnown RBP eCLIP10.69□□□□□ -0.7
SOX6-213ENST00000530378 SLC17A6Q9P2U8 582 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 TCAF1Q9Y4C2 921 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 TEX264Q9Y6I9 313 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 RPS6KL1Q9Y6S9 549 aa10.69□□□□□ -0.7
SOX6-213ENST00000530378 TRPM6Q9BX84 2022 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 ALOX15BO15296 676 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 SPINT1O43278 529 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 CLDN7O95471 211 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 EPOP01588 193 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 LHCGRP22888 699 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 P2RY2P41231 377 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 MSLNQ13421 630 aaPredicted RBP10.68□□□□□ -0.7
SOX6-213ENST00000530378 EFTUD2Q15029 972 aaKnown RBP eCLIP10.68□□□□□ -0.7
SOX6-213ENST00000530378 UAP1Q16222 522 aaPredicted RBP10.68□□□□□ -0.7
SOX6-213ENST00000530378 LRRC66Q68CR7 880 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 CWF19L1Q69YN2 538 aaKnown RBP10.68□□□□□ -0.7
SOX6-213ENST00000530378 BRAT1Q6PJG6 821 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.68□□□□□ -0.7
SOX6-213ENST00000530378 USP45Q70EL2 814 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 PALM2Q8IXS6 379 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms