RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 RAP2CQ9Y3L5 183 aa4.77□□□□□ -1.65
C11orf88-204ENST00000529661 PASKQ96RG2 1323 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 hCG_1807616A0A1W2PRN6 198 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 USP17L23D6RBM5 183 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 PLOD3O60568 738 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 TFP02787 698 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 T-ENOLP0DO92 83 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 UNGP13051 313 aaPredicted RBP4.76□□□□□ -1.65
C11orf88-204ENST00000529661 POU1F1P28069 291 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 HOXA11P31270 313 aaPredicted RBP4.76□□□□□ -1.65
C11orf88-204ENST00000529661 CCKBRP32239 447 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 TNFSF8P32971 234 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 UBA7P41226 1012 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 KCNJ4P48050 445 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 PIP4K2AP48426 406 aaPredicted RBP4.76□□□□□ -1.65
C11orf88-204ENST00000529661 ENTPD1P49961 510 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 CLDN2P57739 230 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 NLRP5P59047 1200 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 PRAMEP78395 509 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 NIPAL4Q0D2K0 466 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 EPS8Q12929 822 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 AIMP2Q13155 320 aaKnown RBP4.76□□□□□ -1.65
C11orf88-204ENST00000529661 OLIG2Q13516 323 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 GPR18Q14330 331 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 CRYMQ14894 314 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 VEPH1Q14D04 833 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 SARM1Q6SZW1 724 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 ENOSF1Q7L5Y1 443 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 SERPINA11Q86U17 422 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 TBC1D26Q86UD7 250 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 CAMK1DQ8IU85 385 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 FBXL14Q8N1E6 418 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 MCPH1Q8NEM0 835 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 RASSF8Q8NHQ8 419 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 POMGNT1Q8WZA1 660 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 GTF3C6Q969F1 213 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 CMTM3Q96MX0 182 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 TMEM204Q9BSN7 226 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 CENPOQ9BU64 300 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 POLDIP3Q9BY77 421 aaKnown RBP4.76□□□□□ -1.65
C11orf88-204ENST00000529661 B3GNT4Q9C0J1 378 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 WDR6Q9NNW5 1121 aaKnown RBP4.76□□□□□ -1.65
C11orf88-204ENST00000529661 KRCC1Q9NPI7 259 aaPredicted RBP4.76□□□□□ -1.65
C11orf88-204ENST00000529661 ASAH2Q9NR71 780 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 PLEKHB1Q9UF11 243 aaPredicted RBP4.76□□□□□ -1.65
C11orf88-204ENST00000529661 SLC4A4Q9Y6R1 1079 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 KAT6BQ8WYB5 2073 aa4.76□□□□□ -1.65
C11orf88-204ENST00000529661 UTYO14607 1347 aa4.75□□□□□ -1.65
C11orf88-204ENST00000529661 EIF3CLB5ME19 914 aaKnown RBP4.75□□□□□ -1.65
C11orf88-204ENST00000529661 HSPB6O14558 160 aa4.75□□□□□ -1.65
C11orf88-204ENST00000529661 SEC14L5O43304 696 aa4.75□□□□□ -1.65
C11orf88-204ENST00000529661 SLC25A17O43808 307 aa4.75□□□□□ -1.65
C11orf88-204ENST00000529661 MT-CYBP00156 380 aaPredicted RBP4.75□□□□□ -1.65
C11orf88-204ENST00000529661 HOXB5P09067 269 aa4.75□□□□□ -1.65
C11orf88-204ENST00000529661 EDN2P20800 178 aa4.75□□□□□ -1.65
C11orf88-204ENST00000529661 CDAP32320 146 aa4.75□□□□□ -1.65
C11orf88-204ENST00000529661 PPARGP37231 505 aaPredicted RBP4.75□□□□□ -1.65
C11orf88-204ENST00000529661 GARSP41250 739 aaKnown RBP4.75□□□□□ -1.65
C11orf88-204ENST00000529661 CXCR3P49682 368 aa4.75□□□□□ -1.65
C11orf88-204ENST00000529661 CSTF3Q12996 717 aaKnown RBP4.75□□□□□ -1.65
C11orf88-204ENST00000529661 FRG1Q14331 258 aaKnown RBP4.75□□□□□ -1.65
C11orf88-204ENST00000529661 PPP2R5BQ15173 497 aa4.75□□□□□ -1.65
C11orf88-204ENST00000529661 SHBQ15464 509 aa4.75□□□□□ -1.65
C11orf88-204ENST00000529661 PLEKHS1Q5SXH7 462 aa4.75□□□□□ -1.65
C11orf88-204ENST00000529661 CFAP58Q5T655 872 aa4.75□□□□□ -1.65
C11orf88-204ENST00000529661 MEPCEQ7L2J0 689 aaKnown RBP4.75□□□□□ -1.65
C11orf88-204ENST00000529661 SZRD1Q7Z422 152 aa4.75□□□□□ -1.65
C11orf88-204ENST00000529661 DHX40Q8IX18 779 aaKnown RBP4.75□□□□□ -1.65
C11orf88-204ENST00000529661 KIAA2013Q8IYS2 634 aa4.75□□□□□ -1.65
C11orf88-204ENST00000529661 ADGRF2Q8IZF7 708 aa4.75□□□□□ -1.65
C11orf88-204ENST00000529661 GABPB2Q8TAK5 448 aaPredicted RBP4.75□□□□□ -1.65
C11orf88-204ENST00000529661 ATOH1Q92858 354 aaPredicted RBP4.75□□□□□ -1.65
C11orf88-204ENST00000529661 SNAPC3Q92966 411 aa4.75□□□□□ -1.65
C11orf88-204ENST00000529661 ZNF479Q96JC4 524 aa4.75□□□□□ -1.65
C11orf88-204ENST00000529661 WDR77Q9BQA1 342 aaPredicted RBP4.75□□□□□ -1.65
C11orf88-204ENST00000529661 FTOQ9C0B1 505 aaKnown RBP eCLIP4.75□□□□□ -1.65
C11orf88-204ENST00000529661 KAT14Q9H8E8 782 aa4.75□□□□□ -1.65
C11orf88-204ENST00000529661 SPATS2LQ9NUQ6 558 aaKnown RBP4.75□□□□□ -1.65
C11orf88-204ENST00000529661 HIF1ANQ9NWT6 349 aa4.75□□□□□ -1.65
C11orf88-204ENST00000529661 ABI3Q9P2A4 366 aa4.75□□□□□ -1.65
C11orf88-204ENST00000529661 SEL1LQ9UBV2 794 aa4.75□□□□□ -1.65
C11orf88-204ENST00000529661 A0A096LPK6 155 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 KLRF2D3W0D1 207 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 NPIPB11E5RHQ5 1161 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 GJB3O75712 270 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 PGM3O95394 542 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 NGFRP08138 427 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 AKR1B1P15121 316 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 CTPS1P17812 591 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 SRD5A1P18405 259 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 GPR12P47775 334 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 RFX2P48378 723 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 HDAC4P56524 1084 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 IFI35P80217 286 aaPredicted RBP4.74□□□□□ -1.65
C11orf88-204ENST00000529661 CEBPZQ03701 1054 aaKnown RBP4.74□□□□□ -1.65
C11orf88-204ENST00000529661 GOLGA8DPQ0D2H9 430 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 CHAF1BQ13112 559 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 FGFBP1Q14512 234 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 IRF3Q14653 427 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 ALG11Q2TAA5 492 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms