RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 CBX4O00257 560 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 DCLK1O15075 740 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 BUB1O43683 1085 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 ZNF821O75541 412 aaPredicted RBP6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 CD48P09326 243 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 SRCP12931 536 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 GLDCP23378 1020 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 KDELR1P24390 212 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 HALP42357 657 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 STK19P49842 368 aaPredicted RBP6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 ARF5P84085 180 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 KIF5AQ12840 1032 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 MPP2Q14168 576 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 CRYMQ14894 314 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 DLG2Q15700 870 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 HIF1AQ16665 826 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 PARP15Q460N3 678 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 ACCSLQ4AC99 568 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 USP39Q53GS9 565 aaKnown RBP6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 AFMIDQ63HM1 303 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 ZC3H14Q6PJT7 736 aaKnown RBP6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 KIAA1328Q86T90 577 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 MAP7D3Q8IWC1 876 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 RHOT1Q8IXI2 618 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 TXLNBQ8N3L3 684 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 TEX9Q8N6V9 391 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 PPHLN1Q8NEY8 458 aaKnown RBP6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 KIAA1524Q8TCG1 905 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 ACMSDQ8TDX5 336 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 HMGB4Q8WW32 186 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 RAPGEF5Q92565 580 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 ERLEC1Q96DZ1 483 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 CSPG4P5Q96PW8 444 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 DESI2Q9BSY9 194 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 CEP44Q9C0F1 390 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 SLC39A8Q9C0K1 460 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 MTG2Q9H4K7 406 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 FANCFQ9NPI8 374 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 ITM2CQ9NQX7 267 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 INTS7Q9NVH2 962 aaKnown RBP6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 RCOR3Q9P2K3 495 aaPredicted RBP6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 VPS51Q9UID3 782 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 TRHDEQ9UKU6 1024 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 HPCAL4Q9UM19 191 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 HYOU1Q9Y4L1 999 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 SPEF1Q9Y4P9 236 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 R4GN57 208 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 DOCK4Q8N1I0 1966 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 A0A0U1RQJ8 604 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 EDDM13A0A1B0GTR0 161 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 A6NCN8 305 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 ZSCAN5CA6NGD5 496 aaPredicted RBP6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 ARHGAP42A6NI28 874 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 C3orf70A6NLC5 250 aaPredicted RBP6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 ZNF487B1APH4 448 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 K7ERQ8 282 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 M0QX08 132 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 MCF2LO15068 1137 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 SMAD6O43541 496 aaKnown RBP6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 SIN3BO75182 1162 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 ZNF217O75362 1048 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 INMTO95050 263 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 ARAFP10398 606 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 VAV1P15498 845 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 P2RY2P41231 377 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 CCNHP51946 323 aaPredicted RBP6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 RPS14P62263 151 aaKnown RBP6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 CCZ1BP86790 482 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 CCZ1P86791 482 aaPredicted RBP6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 ZBTB16Q05516 673 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 DMPKQ09013 629 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 SRSF5Q13243 272 aaKnown RBP6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 BYSLQ13895 437 aaKnown RBP6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 DPYSL3Q14195 570 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 KRT81Q14533 505 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 SMUG1Q53HV7 270 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 ANKRD20A8PQ5CZ79 823 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 KAZNQ674X7 775 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 C11orf63Q6NUN7 778 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 CFAP161Q6P656 301 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 TMCO3Q6UWJ1 677 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 LINGO4Q6UY18 593 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 BNC2Q6ZN30 1099 aaPredicted RBP6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 GK5Q6ZS86 529 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 LHFPL2Q6ZUX7 228 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 VSIG1Q86XK7 387 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 ZNF354CQ86Y25 554 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 ARHGAP12Q8IWW6 846 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 TP53INP2Q8IXH6 220 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 ZNF295-AS1Q8N0V1 137 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 OR8H2Q8N162 312 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 RNF10Q8N5U6 811 aaKnown RBP6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 NPWQ8N729 165 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 FRMD1Q8N878 549 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 PCDH19Q8TAB3 1148 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 GAB3Q8WWW8 586 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 RLN3Q8WXF3 142 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 PRCCQ92733 491 aaPredicted RBP6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 ISG20Q96AZ6 181 aaKnown RBP6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 SKA1Q96BD8 255 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms