RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 SCRN2Q96FV2 425 aa12.17□□□□□ -0.46
TRAPPC4-209ENST00000528230 TBATAQ96M53 351 aa12.17□□□□□ -0.46
TRAPPC4-209ENST00000528230 SEMA3CQ99985 751 aa12.17□□□□□ -0.46
TRAPPC4-209ENST00000528230 DUSP23Q9BVJ7 150 aa12.17□□□□□ -0.46
TRAPPC4-209ENST00000528230 BRD8Q9H0E9 1235 aa12.17□□□□□ -0.46
TRAPPC4-209ENST00000528230 KLK13Q9UKR3 277 aa12.17□□□□□ -0.46
TRAPPC4-209ENST00000528230 COQ6Q9Y2Z9 468 aa12.17□□□□□ -0.46
TRAPPC4-209ENST00000528230 APOL1O14791 398 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 SCAMP1O15126 338 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 FZD6O60353 706 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 RECQL5O94762 991 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 PGLSO95336 258 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 IPO7O95373 1038 aaKnown RBP12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 CPP00450 1065 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 KRT1P04264 644 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 PRKCGP05129 697 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 HOXC4P09017 264 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 ELFN1P0C7U0 828 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 GIMD1P0DJR0 217 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 ALPPL2P10696 532 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 CYP2A6P11509 494 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 KRT10P13645 584 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 ACP1P24666 158 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 ITKQ08881 620 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 TRAF2Q12933 501 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 EIF2B5Q13144 721 aaKnown RBP12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 TFDP2Q14188 446 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 PDK1Q15118 436 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 PROX2Q3B8N5 592 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 TPRG1LQ5T0D9 272 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 ARMC12Q5T9G4 340 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 C11orf63Q6NUN7 778 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 MACC1Q6ZN28 852 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 BZW1Q7L1Q6 419 aaKnown RBP12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 CBARPQ8N350 705 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 GALNT15Q8N3T1 639 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 FAM181AQ8N9Y4 354 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 CCNYQ8ND76 341 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 ATL2Q8NHH9 583 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 TPCN2Q8NHX9 752 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 PDCD6IPQ8WUM4 868 aaKnown RBP12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 PIH1D2Q8WWB5 315 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 RNF25Q96BH1 459 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 IL12RB2Q99665 862 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 TMEM121BQ9BXQ6 578 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 UCKL1Q9NWZ5 548 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 NLGN3Q9NZ94 848 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 IMPACTQ9P2X3 320 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 B4GALT6Q9UBX8 382 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 RAI2Q9Y5P3 530 aa12.16□□□□□ -0.46
TRAPPC4-209ENST00000528230 TMEM8BA6NDV4 472 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 SOWAHDA6NJG2 315 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 GOLGA8CPA6NN73 597 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 BTNL10A8MVZ5 291 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 PSMD11O00231 422 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 TRIM38O00635 465 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 TPP1O14773 563 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 SIGLEC6O43699 453 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 RFPL3O75679 317 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 NEBLO76041 1014 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 ZRANB2O95218 330 aaKnown RBP eCLIP12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 MAP3K6O95382 1288 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 PROS1P07225 676 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 JUNDP17535 347 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 CA4P22748 312 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 HTR1BP28222 390 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 CDC25BP30305 580 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 VIPR1P32241 457 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 TRIM23P36406 574 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 CDKN2BP42772 138 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 NR2C2P49116 596 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 ACADVLP49748 655 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 BLKP51451 505 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 RPL26P61254 145 aaKnown RBP12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 IFI35P80217 286 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 SEMG2Q02383 582 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 INPP5AQ14642 412 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 SMAD1Q15797 465 aaKnown RBP12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 ZNF542PQ5EBM4 170 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 MFSD7Q6UXD7 560 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 UNQ6494/PRO21346Q6UXR6 183 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 CCNI2Q6ZMN8 369 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 TMPRSS12Q86WS5 348 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 RFX6Q8HWS3 928 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 RAVER1Q8IY67 606 aaKnown RBP12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 KATNAL2Q8IYT4 538 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 RCOR2Q8IZ40 523 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 ARRDC2Q8TBH0 407 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 GATA6Q92908 595 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 COQ10AQ96MF6 247 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 OLFM3Q96PB7 478 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 MCCC1Q96RQ3 725 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 LGMNQ99538 433 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 APOOQ9BUR5 198 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 USP29Q9HBJ7 922 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 SPASTQ9UBP0 616 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 KLF15Q9UIH9 416 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 SALL4Q9UJQ4 1053 aa12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 RPL26L1Q9UNX3 145 aaKnown RBP12.15□□□□□ -0.46
TRAPPC4-209ENST00000528230 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms