RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 TRPC5Q9UL62 973 aaPredicted RBP14.73□□□□□ -0.05
CAPN1-214ENST00000528165 A0A0J9YYE9 177 aa14.73□□□□□ -0.05
CAPN1-214ENST00000528165 AP3B1O00203 1094 aa14.73□□□□□ -0.05
CAPN1-214ENST00000528165 NCAM2O15394 837 aa14.73□□□□□ -0.05
CAPN1-214ENST00000528165 MTSS1O43312 755 aa14.73□□□□□ -0.05
CAPN1-214ENST00000528165 IPO13O94829 963 aaKnown RBP14.73□□□□□ -0.05
CAPN1-214ENST00000528165 SNAP29O95721 258 aa14.73□□□□□ -0.05
CAPN1-214ENST00000528165 GPIP06744 558 aa14.73□□□□□ -0.05
CAPN1-214ENST00000528165 MBL2P11226 248 aaPredicted RBP14.73□□□□□ -0.05
CAPN1-214ENST00000528165 HSD17B1P14061 328 aa14.73□□□□□ -0.05
CAPN1-214ENST00000528165 ERCC2P18074 760 aa14.73□□□□□ -0.05
CAPN1-214ENST00000528165 POLR2IP36954 125 aaKnown RBP14.73□□□□□ -0.05
CAPN1-214ENST00000528165 PLK1P53350 603 aa14.73□□□□□ -0.05
CAPN1-214ENST00000528165 GJA9P57773 515 aa14.73□□□□□ -0.05
CAPN1-214ENST00000528165 TAS2R39P59534 338 aa14.73□□□□□ -0.05
CAPN1-214ENST00000528165 PITX1P78337 314 aaPredicted RBP14.73□□□□□ -0.05
CAPN1-214ENST00000528165 BCL2A1Q16548 175 aa14.73□□□□□ -0.05
CAPN1-214ENST00000528165 GADL1Q6ZQY3 521 aa14.73□□□□□ -0.05
CAPN1-214ENST00000528165 RNF135Q8IUD6 432 aa14.73□□□□□ -0.05
CAPN1-214ENST00000528165 SFRP1Q8N474 314 aa14.73□□□□□ -0.05
CAPN1-214ENST00000528165 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.73□□□□□ -0.05
CAPN1-214ENST00000528165 ZNF280CQ8ND82 737 aa14.73□□□□□ -0.05
CAPN1-214ENST00000528165 BEGAINQ9BUH8 593 aa14.73□□□□□ -0.05
CAPN1-214ENST00000528165 EIF2AQ9BY44 585 aaKnown RBP14.73□□□□□ -0.05
CAPN1-214ENST00000528165 TSPYL2Q9H2G4 693 aaPredicted RBP14.73□□□□□ -0.05
CAPN1-214ENST00000528165 TRAF6Q9Y4K3 522 aa14.73□□□□□ -0.05
CAPN1-214ENST00000528165 DYTNA2CJ06 578 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 A8MT66 165 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 ANGPT2O15123 496 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 ARPC2O15144 300 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 INPP4BO15327 924 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 KDM1AO60341 852 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 SEC14L2O76054 403 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 KCNH1O95259 989 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 EEF1DP29692 281 aaKnown RBP14.72□□□□□ -0.05
CAPN1-214ENST00000528165 TUBA3CQ13748 450 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 ZNF618Q5T7W0 954 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 BROXQ5VW32 411 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 SNX19Q92543 992 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 NDRG1Q92597 394 aaKnown RBP14.72□□□□□ -0.05
CAPN1-214ENST00000528165 DCPSQ96C86 337 aaKnown RBP14.72□□□□□ -0.05
CAPN1-214ENST00000528165 GPN2Q9H9Y4 310 aaPredicted RBP14.72□□□□□ -0.05
CAPN1-214ENST00000528165 CDHR5Q9HBB8 845 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 AS3MTQ9HBK9 375 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 SPATA7Q9P0W8 599 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 NDUFAF1Q9Y375 327 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 CPQQ9Y646 472 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 PHIPQ8WWQ0 1821 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 CCDC162PA2VCL2 907 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 M0QYT0 321 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 HCRTO43612 131 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 GFAPP14136 432 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 KCNA5P22460 613 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 CAPRIN1Q14444 709 aaKnown RBP14.72□□□□□ -0.05
CAPN1-214ENST00000528165 OXA1LQ15070 435 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 KYAT1Q16773 422 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 VPS26BQ4G0F5 336 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 LDLRAP1Q5SW96 308 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 CLEC6AQ6EIG7 209 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 LARP4Q71RC2 724 aaKnown RBP eCLIP14.72□□□□□ -0.054e-7■□□□□ 10.9
CAPN1-214ENST00000528165 PHF21BQ96EK2 531 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 ZNF347Q96SE7 839 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 MAP10Q9P2G4 905 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 GIT1Q9Y2X7 761 aa14.72□□□□□ -0.05
CAPN1-214ENST00000528165 TTC24A2A3L6 582 aaPredicted RBP14.71□□□□□ -0.05
CAPN1-214ENST00000528165 ALBP02768 609 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 JUNBP17275 347 aaPredicted RBP14.71□□□□□ -0.05
CAPN1-214ENST00000528165 GPX3P22352 226 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 DNAJB2P25686 324 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 RFC2P35250 354 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 KPNA1P52294 538 aaPredicted RBP14.71□□□□□ -0.05
CAPN1-214ENST00000528165 OCA2Q04671 838 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 AMHR2Q16671 573 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 PKN3Q6P5Z2 889 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 USP51Q70EK9 711 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 LINC00523Q86TU6 105 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 UNC93AQ86WB7 457 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 CNTN4Q8IWV2 1026 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 MINDY1Q8N5J2 469 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.71□□□□□ -0.05
CAPN1-214ENST00000528165 SNX27Q96L92 541 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 MRM3Q9HC36 420 aaKnown RBP14.71□□□□□ -0.05
CAPN1-214ENST00000528165 INTS10Q9NVR2 710 aaKnown RBP14.71□□□□□ -0.05
CAPN1-214ENST00000528165 PSME4Q14997 1843 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 CLDN25C9JDP6 229 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 AQP9O43315 295 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 B4GAT1O43505 415 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 TGFB3P10600 412 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 ELK4P28324 431 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 MLLT10P55197 1068 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 TPI1P60174 286 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 ZNF846Q147U1 533 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 POU6F1Q14863 301 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 TECRLQ5HYJ1 363 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 PCID2Q5JVF3 399 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 FAM35AQ86V20 835 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 PIGZQ86VD9 579 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 AGBL3Q8NEM8 1001 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 C19orf60Q96EN9 201 aa14.71□□□□□ -0.05
CAPN1-214ENST00000528165 GPR20Q99678 358 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms