RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 ZNF284Q2VY69 593 aa20.85■□□□□ 0.93
CD44-222ENST00000526025 SETMARQ53H47 684 aaPredicted RBP20.85■□□□□ 0.93
CD44-222ENST00000526025 TTC27Q6P3X3 843 aa20.85■□□□□ 0.93
CD44-222ENST00000526025 CCDC137Q6PK04 289 aaKnown RBP20.85■□□□□ 0.93
CD44-222ENST00000526025 RABEPKQ7Z6M1 372 aa20.85■□□□□ 0.93
CD44-222ENST00000526025 SLCO2A1Q92959 643 aa20.85■□□□□ 0.93
CD44-222ENST00000526025 MLPHQ9BV36 600 aaPredicted RBP20.85■□□□□ 0.93
CD44-222ENST00000526025 DMDP11532 3685 aa20.85■□□□□ 0.93
CD44-222ENST00000526025 A0A1W2PPC4 97 aa20.84■□□□□ 0.93
CD44-222ENST00000526025 PSMD11O00231 422 aa20.84■□□□□ 0.93
CD44-222ENST00000526025 FSBPO95073 299 aa20.84■□□□□ 0.93
CD44-222ENST00000526025 METTL18O95568 372 aa20.84■□□□□ 0.93
CD44-222ENST00000526025 RETP07949 1114 aa20.84■□□□□ 0.93
CD44-222ENST00000526025 HLA-DPA1P20036 260 aa20.84■□□□□ 0.93
CD44-222ENST00000526025 ADRA1AP35348 466 aa20.84■□□□□ 0.93
CD44-222ENST00000526025 KCNJ1P48048 391 aa20.84■□□□□ 0.93
CD44-222ENST00000526025 RALGDSQ12967 914 aa20.84■□□□□ 0.93
CD44-222ENST00000526025 TUBB2AQ13885 445 aa20.84■□□□□ 0.93
CD44-222ENST00000526025 AGERQ15109 404 aa20.84■□□□□ 0.93
CD44-222ENST00000526025 QPCTQ16769 361 aa20.84■□□□□ 0.93
CD44-222ENST00000526025 FAM182AQ5T1J6 154 aa20.84■□□□□ 0.93
CD44-222ENST00000526025 KCTD11Q693B1 232 aa20.84■□□□□ 0.93
CD44-222ENST00000526025 CCDC70Q6NSX1 233 aa20.84■□□□□ 0.93
CD44-222ENST00000526025 GSTA5Q7RTV2 222 aa20.84■□□□□ 0.93
CD44-222ENST00000526025 LPCAT1Q8NF37 534 aa20.84■□□□□ 0.93
CD44-222ENST00000526025 CXorf40AQ8TE69 158 aa20.84■□□□□ 0.93
CD44-222ENST00000526025 ORAI3Q9BRQ5 295 aa20.84■□□□□ 0.93
CD44-222ENST00000526025 TUBB2BQ9BVA1 445 aa20.84■□□□□ 0.93
CD44-222ENST00000526025 C1QTNF2Q9BXJ5 285 aa20.84■□□□□ 0.93
CD44-222ENST00000526025 B4GALT6Q9UBX8 382 aa20.84■□□□□ 0.93
CD44-222ENST00000526025 SUSD2Q9UGT4 822 aa20.84■□□□□ 0.93
CD44-222ENST00000526025 PCYOX1Q9UHG3 505 aa20.84■□□□□ 0.93
CD44-222ENST00000526025 GGT7Q9UJ14 662 aa20.84■□□□□ 0.93
CD44-222ENST00000526025 PILRBQ9UKJ0 227 aa20.84■□□□□ 0.93
CD44-222ENST00000526025 ZFR2Q9UPR6 939 aaKnown RBP20.84■□□□□ 0.93
CD44-222ENST00000526025 ITM2BQ9Y287 266 aa20.84■□□□□ 0.93
CD44-222ENST00000526025 MYO15AQ9UKN7 3530 aa20.84■□□□□ 0.93
CD44-222ENST00000526025 PDE2AO00408 941 aaPredicted RBP20.83■□□□□ 0.93
CD44-222ENST00000526025 FGF1P05230 155 aa20.83■□□□□ 0.93
CD44-222ENST00000526025 ZNF30P17039 623 aa20.83■□□□□ 0.93
CD44-222ENST00000526025 FAM193AP78312 1265 aa20.83■□□□□ 0.93
CD44-222ENST00000526025 CREB5Q02930 508 aa20.83■□□□□ 0.93
CD44-222ENST00000526025 SEMA5AQ13591 1074 aa20.83■□□□□ 0.93
CD44-222ENST00000526025 PCSK7Q16549 785 aa20.83■□□□□ 0.93
CD44-222ENST00000526025 LRRC73Q5JTD7 316 aa20.83■□□□□ 0.93
CD44-222ENST00000526025 CYP2U1Q7Z449 544 aa20.83■□□□□ 0.93
CD44-222ENST00000526025 SYT12Q8IV01 421 aa20.83■□□□□ 0.93
CD44-222ENST00000526025 DENND6BQ8NEG7 585 aa20.83■□□□□ 0.93
CD44-222ENST00000526025 IPMKQ8NFU5 416 aa20.83■□□□□ 0.93
CD44-222ENST00000526025 C1orf216Q8TAB5 229 aa20.83■□□□□ 0.93
CD44-222ENST00000526025 FSD1LQ9BXM9 530 aa20.83■□□□□ 0.93
CD44-222ENST00000526025 LRRC40Q9H9A6 602 aa20.83■□□□□ 0.93
CD44-222ENST00000526025 MAGEE1Q9HCI5 957 aa20.83■□□□□ 0.93
CD44-222ENST00000526025 KCTD5Q9NXV2 234 aa20.83■□□□□ 0.93
CD44-222ENST00000526025 UBP1Q9NZI7 540 aa20.83■□□□□ 0.93
CD44-222ENST00000526025 CDC23Q9UJX2 597 aa20.83■□□□□ 0.93
CD44-222ENST00000526025 GMEB2Q9UKD1 530 aa20.83■□□□□ 0.93
CD44-222ENST00000526025 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.82■□□□□ 0.92
CD44-222ENST00000526025 PRR23AA6NEV1 266 aa20.82■□□□□ 0.92
CD44-222ENST00000526025 LRP3O75074 770 aa20.82■□□□□ 0.92
CD44-222ENST00000526025 TM7SF2O76062 418 aa20.82■□□□□ 0.92
CD44-222ENST00000526025 HEXIM1O94992 359 aaKnown RBP20.82■□□□□ 0.92
CD44-222ENST00000526025 AP2A1O95782 977 aa20.82■□□□□ 0.92
CD44-222ENST00000526025 GAS8O95995 478 aa20.82■□□□□ 0.92
CD44-222ENST00000526025 ATXN1LP0C7T5 689 aaKnown RBP20.82■□□□□ 0.92
CD44-222ENST00000526025 ITIH2P19823 946 aa20.82■□□□□ 0.92
CD44-222ENST00000526025 RPL22P35268 128 aaKnown RBP20.82■□□□□ 0.92
CD44-222ENST00000526025 HNF1BP35680 557 aa20.82■□□□□ 0.92
CD44-222ENST00000526025 SLC1A5Q15758 541 aa20.82■□□□□ 0.92
CD44-222ENST00000526025 RANBP10Q6VN20 620 aa20.82■□□□□ 0.92
CD44-222ENST00000526025 LIPIQ6XZB0 460 aa20.82■□□□□ 0.92
CD44-222ENST00000526025 ZNF572Q7Z3I7 529 aaPredicted RBP20.82■□□□□ 0.92
CD44-222ENST00000526025 CBARPQ8N350 705 aaPredicted RBP20.82■□□□□ 0.92
CD44-222ENST00000526025 DEFB119Q8N690 84 aa20.82■□□□□ 0.92
CD44-222ENST00000526025 GLIS1Q8NBF1 620 aa20.82■□□□□ 0.92
CD44-222ENST00000526025 RMDN1Q96DB5 314 aa20.82■□□□□ 0.92
CD44-222ENST00000526025 LENG8Q96PV6 779 aaPredicted RBP20.82■□□□□ 0.92
CD44-222ENST00000526025 C1QTNF7Q9BXJ2 289 aa20.82■□□□□ 0.92
CD44-222ENST00000526025 SLC17A9Q9BYT1 436 aa20.82■□□□□ 0.92
CD44-222ENST00000526025 ARNT2Q9HBZ2 717 aa20.82■□□□□ 0.92
CD44-222ENST00000526025 EIF2B3Q9NR50 452 aaKnown RBP20.82■□□□□ 0.92
CD44-222ENST00000526025 NEU2Q9Y3R4 380 aa20.82■□□□□ 0.92
CD44-222ENST00000526025 SCN8AQ9UQD0 1980 aa20.81■□□□□ 0.92
CD44-222ENST00000526025 NPIPB15A6NHN6 443 aaPredicted RBP20.81■□□□□ 0.92
CD44-222ENST00000526025 PRR5-ARHGAP8B1AHC4 643 aa20.81■□□□□ 0.92
CD44-222ENST00000526025 PRKCGP05129 697 aa20.81■□□□□ 0.92
CD44-222ENST00000526025 ELFN1P0C7U0 828 aa20.81■□□□□ 0.92
CD44-222ENST00000526025 C6P13671 934 aa20.81■□□□□ 0.92
CD44-222ENST00000526025 ITPKAP23677 461 aa20.81■□□□□ 0.92
CD44-222ENST00000526025 LIG3P49916 1009 aa20.81■□□□□ 0.92
CD44-222ENST00000526025 GALNT3Q14435 633 aa20.81■□□□□ 0.92
CD44-222ENST00000526025 SEL1L3Q68CR1 1132 aa20.81■□□□□ 0.92
CD44-222ENST00000526025 NAPEPLDQ6IQ20 393 aa20.81■□□□□ 0.92
CD44-222ENST00000526025 SYDE1Q6ZW31 735 aaPredicted RBP20.81■□□□□ 0.92
CD44-222ENST00000526025 ARMCX6Q7L4S7 300 aa20.81■□□□□ 0.92
CD44-222ENST00000526025 KIF18AQ8NI77 898 aa20.81■□□□□ 0.92
CD44-222ENST00000526025 CEP76Q8TAP6 659 aa20.81■□□□□ 0.92
CD44-222ENST00000526025 FAM174AQ8TBP5 190 aa20.81■□□□□ 0.92
CD44-222ENST00000526025 DDX47Q9H0S4 455 aaKnown RBP20.81■□□□□ 0.92
CD44-222ENST00000526025 TRABDQ9H4I3 376 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms