RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 DDR1Q08345 913 aa4.7□□□□□ -1.66
CSDE1-211ENST00000525970 CDC37Q16543 378 aaPredicted RBP4.7□□□□□ -1.66
CSDE1-211ENST00000525970 COL28A1Q2UY09 1125 aa4.7□□□□□ -1.66
CSDE1-211ENST00000525970 PCGF3Q3KNV8 242 aa4.7□□□□□ -1.66
CSDE1-211ENST00000525970 ZNF628Q5EBL2 1059 aa4.7□□□□□ -1.66
CSDE1-211ENST00000525970 C9orf152Q5JTZ5 239 aa4.7□□□□□ -1.66
CSDE1-211ENST00000525970 CC2D1BQ5T0F9 858 aaKnown RBP4.7□□□□□ -1.66
CSDE1-211ENST00000525970 FAM47EQ6ZV65 393 aa4.7□□□□□ -1.66
CSDE1-211ENST00000525970 GSTA5Q7RTV2 222 aa4.7□□□□□ -1.66
CSDE1-211ENST00000525970 YTHDF3Q7Z739 585 aaKnown RBP4.7□□□□□ -1.66
CSDE1-211ENST00000525970 WDR5BQ86VZ2 330 aa4.7□□□□□ -1.66
CSDE1-211ENST00000525970 CADM3Q8N126 398 aa4.7□□□□□ -1.66
CSDE1-211ENST00000525970 C8orf58Q8NAV2 365 aa4.7□□□□□ -1.66
CSDE1-211ENST00000525970 ZNF398Q8TD17 642 aa4.7□□□□□ -1.66
CSDE1-211ENST00000525970 KAT2AQ92830 837 aa4.7□□□□□ -1.66
CSDE1-211ENST00000525970 ATP6V1E2Q96A05 226 aa4.7□□□□□ -1.66
CSDE1-211ENST00000525970 TMCO6Q96DC7 493 aa4.7□□□□□ -1.66
CSDE1-211ENST00000525970 SAT2Q96F10 170 aaPredicted RBP4.7□□□□□ -1.66
CSDE1-211ENST00000525970 SPATA17Q96L03 361 aa4.7□□□□□ -1.66
CSDE1-211ENST00000525970 EFHD1Q9BUP0 239 aa4.7□□□□□ -1.66
CSDE1-211ENST00000525970 IFT27Q9BW83 186 aa4.7□□□□□ -1.66
CSDE1-211ENST00000525970 HIPK3Q9H422 1215 aa4.7□□□□□ -1.66
CSDE1-211ENST00000525970 KIF9Q9HAQ2 790 aa4.7□□□□□ -1.66
CSDE1-211ENST00000525970 WDR35Q9P2L0 1181 aa4.7□□□□□ -1.66
CSDE1-211ENST00000525970 SEL1LQ9UBV2 794 aa4.7□□□□□ -1.66
CSDE1-211ENST00000525970 TRPV2Q9Y5S1 764 aa4.7□□□□□ -1.66
CSDE1-211ENST00000525970 CXorf65A6NEN9 183 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 MITFO75030 526 aaPredicted RBP4.69□□□□□ -1.66
CSDE1-211ENST00000525970 TBCAO75347 108 aaKnown RBP4.69□□□□□ -1.66
CSDE1-211ENST00000525970 NDUFS3O75489 264 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 NEURL1O76050 574 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 RNF8O76064 485 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 C22orf31O95567 290 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 LATS1O95835 1130 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 WNT1P04628 370 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 ITGAXP20702 1163 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 KELP23276 732 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 PON1P27169 355 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 HOXA7P31268 230 aaPredicted RBP4.69□□□□□ -1.66
CSDE1-211ENST00000525970 MRPS5P82675 430 aaKnown RBP4.69□□□□□ -1.66
CSDE1-211ENST00000525970 GRIK3Q13003 919 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 RUNX2Q13950 521 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 ZNF268Q14587 947 aaPredicted RBP4.69□□□□□ -1.66
CSDE1-211ENST00000525970 VEPH1Q14D04 833 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 PPP2R5BQ15173 497 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 PFKFB3Q16875 520 aaPredicted RBP4.69□□□□□ -1.66
CSDE1-211ENST00000525970 C15orf59Q2T9L4 293 aaPredicted RBP4.69□□□□□ -1.66
CSDE1-211ENST00000525970 CRY2Q49AN0 593 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 SYTL3Q4VX76 610 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 KRT79Q5XKE5 535 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 SLC18B1Q6NT16 456 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 C11orf87Q6NUJ2 197 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 DCLRE1AQ6PJP8 1040 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 CPLX2Q6PUV4 134 aaKnown RBP4.69□□□□□ -1.66
CSDE1-211ENST00000525970 CNGA4Q8IV77 575 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 MINDY1Q8N5J2 469 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 ARL14EPQ8N8R7 260 aaPredicted RBP4.69□□□□□ -1.66
CSDE1-211ENST00000525970 SNAPC3Q92966 411 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 ZKSCAN4Q969J2 545 aaPredicted RBP4.69□□□□□ -1.66
CSDE1-211ENST00000525970 ELMOD3Q96FG2 381 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 PPP1R13BQ96KQ4 1090 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 SEPT5Q99719 369 aaPredicted RBP4.69□□□□□ -1.66
CSDE1-211ENST00000525970 SYT17Q9BSW7 474 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 C1QTNF5Q9BXJ0 243 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 QTRT1Q9BXR0 403 aaKnown RBP4.69□□□□□ -1.66
CSDE1-211ENST00000525970 TKTL2Q9H0I9 626 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 ZNF304Q9HCX3 659 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 RANGRFQ9HD47 186 aaPredicted RBP4.69□□□□□ -1.66
CSDE1-211ENST00000525970 NRIP3Q9NQ35 241 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 PDGFCQ9NRA1 345 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 ABCF3Q9NUQ8 709 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 ARL8BQ9NVJ2 186 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 CPSF2Q9P2I0 782 aaKnown RBP4.69□□□□□ -1.66
CSDE1-211ENST00000525970 CTNNAL1Q9UBT7 734 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 CARD8Q9Y2G2 431 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 WDR17Q8IZU2 1322 aa4.69□□□□□ -1.66
CSDE1-211ENST00000525970 ZNF644Q9H582 1327 aaPredicted RBP4.69□□□□□ -1.66
CSDE1-211ENST00000525970 CYP2D7A0A087X1C5 515 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 LOC102723996A0A087X1L8 192 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 hCG_1809904A0A1W2PP81 198 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 A0A1W2PPE2 198 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 A0A1W2PR64 198 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 H0Y626 953 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 SLC7A4O43246 635 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 HS6ST1O60243 411 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 SLC25A12O75746 678 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 PSMD10O75832 226 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 TPPPO94811 219 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 NKX2-2O95096 273 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 SRPRAP08240 638 aaKnown RBP4.68□□□□□ -1.66
CSDE1-211ENST00000525970 TGFB3P10600 412 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 ST6GAL1P15907 406 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 YWHAQP27348 245 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 CHRNA5P30532 468 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 SHMT1P34896 483 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 THPOP40225 353 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 CAPZA2P47755 286 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 LMAN1P49257 510 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 CLCN3P51790 818 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 STAT2P52630 851 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms