RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 FAM71DQ8N9W8 422 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 C12orf50Q8NA57 414 aaPredicted RBP12.89□□□□□ -0.35
VEGFA-224ENST00000523873 UBE2Q2Q8WVN8 375 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 OSBPL9Q96SU4 736 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 TMEM121Q9BTD3 319 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 SLC17A9Q9BYT1 436 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 CAPN10Q9HC96 672 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 SUSD2Q9UGT4 822 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 PHTF1Q9UMS5 762 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 SLC6A14Q9UN76 642 aa12.89□□□□□ -0.35
VEGFA-224ENST00000523873 RIF1Q5UIP0 2472 aaKnown RBP12.89□□□□□ -0.35
VEGFA-224ENST00000523873 A0A1W2PR77 199 aa12.88□□□□□ -0.35
VEGFA-224ENST00000523873 LNP1A1A4G5 178 aa12.88□□□□□ -0.35
VEGFA-224ENST00000523873 ZNF185O15231 689 aa12.88□□□□□ -0.35
VEGFA-224ENST00000523873 FANCGO15287 622 aa12.88□□□□□ -0.35
VEGFA-224ENST00000523873 LRP3O75074 770 aa12.88□□□□□ -0.35
VEGFA-224ENST00000523873 TM7SF2O76062 418 aa12.88□□□□□ -0.35
VEGFA-224ENST00000523873 GM2AP17900 193 aa12.88□□□□□ -0.35
VEGFA-224ENST00000523873 LHCGRP22888 699 aa12.88□□□□□ -0.35
VEGFA-224ENST00000523873 PSMB4P28070 264 aa12.88□□□□□ -0.35
VEGFA-224ENST00000523873 HNF1BP35680 557 aa12.88□□□□□ -0.35
VEGFA-224ENST00000523873 DPP6P42658 865 aa12.88□□□□□ -0.35
VEGFA-224ENST00000523873 LIG3P49916 1009 aa12.88□□□□□ -0.35
VEGFA-224ENST00000523873 SUOXP51687 545 aa12.88□□□□□ -0.35
VEGFA-224ENST00000523873 EPHB1P54762 984 aa12.88□□□□□ -0.35
VEGFA-224ENST00000523873 POLR2LP62875 67 aaKnown RBP12.88□□□□□ -0.35
VEGFA-224ENST00000523873 OLIG2Q13516 323 aa12.88□□□□□ -0.35
VEGFA-224ENST00000523873 CNGA3Q16281 694 aa12.88□□□□□ -0.35
VEGFA-224ENST00000523873 QPCTQ16769 361 aa12.88□□□□□ -0.35
VEGFA-224ENST00000523873 AASDHQ4L235 1098 aaPredicted RBP12.88□□□□□ -0.35
VEGFA-224ENST00000523873 KDELC1Q6UW63 502 aa12.88□□□□□ -0.35
VEGFA-224ENST00000523873 LIPIQ6XZB0 460 aa12.88□□□□□ -0.35
VEGFA-224ENST00000523873 TADA1Q96BN2 335 aa12.88□□□□□ -0.35
VEGFA-224ENST00000523873 SPATA13Q96N96 652 aa12.88□□□□□ -0.35
VEGFA-224ENST00000523873 FCRL5Q96RD9 977 aa12.88□□□□□ -0.35
VEGFA-224ENST00000523873 TRIB3Q96RU7 358 aa12.88□□□□□ -0.35
VEGFA-224ENST00000523873 VAT1Q99536 393 aa12.88□□□□□ -0.35
VEGFA-224ENST00000523873 MLPHQ9BV36 600 aaPredicted RBP12.88□□□□□ -0.35
VEGFA-224ENST00000523873 GTPBP2Q9BX10 602 aaKnown RBP12.88□□□□□ -0.35
VEGFA-224ENST00000523873 C1QTNF2Q9BXJ5 285 aa12.88□□□□□ -0.35
VEGFA-224ENST00000523873 NUSAP1Q9BXS6 441 aaKnown RBP12.88□□□□□ -0.35
VEGFA-224ENST00000523873 GBA3Q9H227 469 aa12.88□□□□□ -0.35
VEGFA-224ENST00000523873 CAAP1Q9H8G2 361 aa12.88□□□□□ -0.35
VEGFA-224ENST00000523873 PTPRZ1P23471 2315 aaPredicted RBP12.88□□□□□ -0.35
VEGFA-224ENST00000523873 A0A0J9YYE9 177 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 A0A1W2PQ67 120 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 PRAMEF26H0Y7S4 382 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 LZTS3O60299 673 aaPredicted RBP12.87□□□□□ -0.35
VEGFA-224ENST00000523873 TRBC1P01850 177 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 ELFN1P0C7U0 828 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 PIRTP0C851 137 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 ETS1P14921 441 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 ENGP17813 658 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 HNRNPA2B1P22626 353 aaKnown RBP12.87□□□□□ -0.35
VEGFA-224ENST00000523873 MSNP26038 577 aaKnown RBP12.87□□□□□ -0.35
VEGFA-224ENST00000523873 VIPR1P32241 457 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 HOXD12P35452 270 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 KCNJ1P48048 391 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 RACK1P63244 317 aaKnown RBP12.87□□□□□ -0.35
VEGFA-224ENST00000523873 GRIK2Q13002 908 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 SGCGQ13326 291 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 IRF4Q15306 451 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 OASLQ15646 514 aaKnown RBP12.87□□□□□ -0.35
VEGFA-224ENST00000523873 KIF19Q2TAC6 998 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 FAXCQ5TGI0 409 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 ITPRIPL1Q6GPH6 555 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 GCNT7Q6ZNI0 430 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 RFLNAQ6ZTI6 216 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 RASGEF1CQ8N431 466 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 TP53I13Q8NBR0 393 aaPredicted RBP12.87□□□□□ -0.35
VEGFA-224ENST00000523873 TMEM145Q8NBT3 493 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 IPMKQ8NFU5 416 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 CEP76Q8TAP6 659 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 RMDN1Q96DB5 314 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 PBKQ96KB5 322 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 MCCC1Q96RQ3 725 aaPredicted RBP12.87□□□□□ -0.35
VEGFA-224ENST00000523873 KLF6Q99612 283 aaPredicted RBP12.87□□□□□ -0.35
VEGFA-224ENST00000523873 EDEM2Q9BV94 578 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 MBNL1Q9NR56 388 aaKnown RBP12.87□□□□□ -0.35
VEGFA-224ENST00000523873 TRHDEQ9UKU6 1024 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 SNX12Q9UMY4 172 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 DMTF1Q9Y222 760 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 SNX11Q9Y5W9 270 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 PLXNB3Q9ULL4 1909 aa12.87□□□□□ -0.35
VEGFA-224ENST00000523873 ZNF106Q9H2Y7 1883 aaKnown RBP12.87□□□□□ -0.35
VEGFA-224ENST00000523873 ZFHX2Q9C0A1 2572 aaPredicted RBP12.86□□□□□ -0.35
VEGFA-224ENST00000523873 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.86□□□□□ -0.35
VEGFA-224ENST00000523873 POM121BA6NF01 834 aa12.86□□□□□ -0.35
VEGFA-224ENST00000523873 C5orf60A6NFR6 353 aa12.86□□□□□ -0.35
VEGFA-224ENST00000523873 CAPN8A6NHC0 703 aa12.86□□□□□ -0.35
VEGFA-224ENST00000523873 PRR5-ARHGAP8B1AHC4 643 aa12.86□□□□□ -0.35
VEGFA-224ENST00000523873 STK10O94804 968 aaKnown RBP12.86□□□□□ -0.35
VEGFA-224ENST00000523873 HEXIM1O94992 359 aaKnown RBP12.86□□□□□ -0.35
VEGFA-224ENST00000523873 METTL18O95568 372 aa12.86□□□□□ -0.35
VEGFA-224ENST00000523873 C1SP09871 688 aa12.86□□□□□ -0.35
VEGFA-224ENST00000523873 CYP2A6P11509 494 aaPredicted RBP12.86□□□□□ -0.35
VEGFA-224ENST00000523873 CA4P22748 312 aa12.86□□□□□ -0.35
VEGFA-224ENST00000523873 CD38P28907 300 aa12.86□□□□□ -0.35
VEGFA-224ENST00000523873 HOXD11P31277 338 aaPredicted RBP12.86□□□□□ -0.35
VEGFA-224ENST00000523873 AKT2P31751 481 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms