RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 RNF25Q96BH1 459 aaPredicted RBP17.96■□□□□ 0.47
TRAPPC9-211ENST00000521700 POLR1EQ9GZS1 481 aaKnown RBP17.96■□□□□ 0.47
TRAPPC9-211ENST00000521700 B4GALT6Q9UBX8 382 aa17.96■□□□□ 0.47
TRAPPC9-211ENST00000521700 PNMA8BQ9ULN7 279 aaPredicted RBP17.96■□□□□ 0.47
TRAPPC9-211ENST00000521700 PHTF1Q9UMS5 762 aa17.96■□□□□ 0.47
TRAPPC9-211ENST00000521700 ALG6Q9Y672 507 aa17.96■□□□□ 0.47
TRAPPC9-211ENST00000521700 CACNA1BQ00975 2339 aa17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 AKAP13Q12802 2813 aa17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 NEMP2A6NFY4 417 aa17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 SCAMP1O15126 338 aa17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 NEBLO76041 1014 aa17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 RECQL5O94762 991 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 PGLSO95336 258 aa17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 CPP00450 1065 aa17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 C1SP09871 688 aa17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 ELFN1P0C7U0 828 aa17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 CCNB1P14635 433 aa17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 GM2AP17900 193 aa17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 CYLC1P35663 651 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 PEX5P50542 639 aa17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 SPA17Q15506 151 aa17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 SMAD1Q15797 465 aaKnown RBP17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 ALG1LQ6GMV1 187 aa17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 MARCH9Q86YJ5 346 aa17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 CCDC13Q8IYE1 715 aa17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 CCNYQ8ND76 341 aa17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 ZNF548Q8NEK5 533 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 HDAC11Q96DB2 347 aa17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 LGMNQ99538 433 aa17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 APOOQ9BUR5 198 aa17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 MAK16Q9BXY0 300 aaKnown RBP17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 TCEAL2Q9H3H9 227 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 DDX56Q9NY93 547 aaKnown RBP17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 AMACRQ9UHK6 382 aa17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 HEY1Q9Y5J3 304 aa17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 RAI2Q9Y5P3 530 aa17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 EPN1Q9Y6I3 576 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC9-211ENST00000521700 SOWAHDA6NJG2 315 aa17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 H3BM21 787 aa17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 APOL1O14791 398 aa17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 SPOPO43791 374 aa17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 FZD6O60353 706 aa17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 RFPL3O75679 317 aa17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 PCCBP05166 539 aa17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 PDHA1P08559 390 aa17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 DSC2Q02487 901 aa17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 PTPRRQ15256 657 aa17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 ST3GAL2Q16842 350 aa17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 ARMC12Q5T9G4 340 aa17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 MFSD7Q6UXD7 560 aa17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 MACC1Q6ZN28 852 aa17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 TMTC1Q8IUR5 882 aa17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 RBFAQ8N0V3 343 aa17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 CBARPQ8N350 705 aaPredicted RBP17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 PLA2G15Q8NCC3 412 aa17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 ARRDC2Q8TBH0 407 aa17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 BTN2A2Q8WVV5 523 aa17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 PIH1D2Q8WWB5 315 aa17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 SCRN2Q96FV2 425 aa17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 ANP32EQ9BTT0 268 aa17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 GOLPH3Q9H4A6 298 aa17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 NLGN3Q9NZ94 848 aa17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 PPIL1Q9Y3C6 166 aa17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 OR1A2Q9Y585 309 aa17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 CSNK1G3Q9Y6M4 447 aa17.94■□□□□ 0.46
TRAPPC9-211ENST00000521700 A0A0A6YYK5 440 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC9-211ENST00000521700 K7ESM1 405 aa17.93■□□□□ 0.46
TRAPPC9-211ENST00000521700 AQP9O43315 295 aa17.93■□□□□ 0.46
TRAPPC9-211ENST00000521700 NDUFA10O95299 355 aa17.93■□□□□ 0.46
TRAPPC9-211ENST00000521700 JCHAINP01591 159 aa17.93■□□□□ 0.46
TRAPPC9-211ENST00000521700 HLA-DQB2P05538 268 aa17.93■□□□□ 0.46
TRAPPC9-211ENST00000521700 ALPPL2P10696 532 aa17.93■□□□□ 0.46
TRAPPC9-211ENST00000521700 CES1P23141 567 aa17.93■□□□□ 0.46
TRAPPC9-211ENST00000521700 ACP1P24666 158 aa17.93■□□□□ 0.46
TRAPPC9-211ENST00000521700 VIPR1P32241 457 aa17.93■□□□□ 0.46
TRAPPC9-211ENST00000521700 PPIDQ08752 370 aaKnown RBP17.93■□□□□ 0.46
TRAPPC9-211ENST00000521700 NIPAL4Q0D2K0 466 aa17.93■□□□□ 0.46
TRAPPC9-211ENST00000521700 MTM1Q13496 603 aa17.93■□□□□ 0.46
TRAPPC9-211ENST00000521700 ACOX1Q15067 660 aa17.93■□□□□ 0.46
TRAPPC9-211ENST00000521700 CNGA3Q16281 694 aa17.93■□□□□ 0.46
TRAPPC9-211ENST00000521700 HS1BP3Q53T59 392 aa17.93■□□□□ 0.46
TRAPPC9-211ENST00000521700 ODF2Q5BJF6 829 aa17.93■□□□□ 0.46
TRAPPC9-211ENST00000521700 ENPP7Q6UWV6 458 aa17.93■□□□□ 0.46
TRAPPC9-211ENST00000521700 NPNTQ6UXI9 565 aa17.93■□□□□ 0.46
TRAPPC9-211ENST00000521700 NYAP1Q6ZVC0 841 aa17.93■□□□□ 0.46
TRAPPC9-211ENST00000521700 RFX6Q8HWS3 928 aa17.93■□□□□ 0.46
TRAPPC9-211ENST00000521700 PHACTR4Q8IZ21 702 aa17.93■□□□□ 0.46
TRAPPC9-211ENST00000521700 GALNT15Q8N3T1 639 aa17.93■□□□□ 0.46
TRAPPC9-211ENST00000521700 TPCN2Q8NHX9 752 aa17.93■□□□□ 0.46
TRAPPC9-211ENST00000521700 LMX1AQ8TE12 382 aa17.93■□□□□ 0.46
TRAPPC9-211ENST00000521700 COQ10AQ96MF6 247 aa17.93■□□□□ 0.46
TRAPPC9-211ENST00000521700 ZNF830Q96NB3 372 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC9-211ENST00000521700 SALL4Q9UJQ4 1053 aa17.93■□□□□ 0.46
TRAPPC9-211ENST00000521700 FAM149AA5PLN7 773 aa17.92■□□□□ 0.46
TRAPPC9-211ENST00000521700 RCCD1A6NED2 376 aa17.92■□□□□ 0.46
TRAPPC9-211ENST00000521700 KCNK1O00180 336 aa17.92■□□□□ 0.46
TRAPPC9-211ENST00000521700 GCATO75600 419 aa17.92■□□□□ 0.46
TRAPPC9-211ENST00000521700 HEXIM1O94992 359 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms