RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 ZBTB5O15062 677 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 SPTLC2O15270 562 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 NKX2-8O15522 239 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 NCK2O43639 380 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 PPP6R2O75170 966 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 CNTN5O94779 1100 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 LARGE1O95461 756 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 CTDNEP1O95476 244 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 LCKP06239 509 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 RFPL3SP0C7P2 107 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 SETSIPP0DME0 302 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 HOXD10P28358 340 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 TECP42680 631 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 PSMC4P43686 418 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 POLD2P49005 469 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 HTR6P50406 440 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 LBX1P52954 281 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 ALDH18A1P54886 795 aaKnown RBP3.49□□□□□ -1.85
VPS13B-209ENST00000521559 AKAP17AQ02040 695 aaKnown RBP3.49□□□□□ -1.85
VPS13B-209ENST00000521559 TLE3Q04726 772 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 ST3GAL1Q11201 340 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 STARD3Q14849 445 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 RAB30Q15771 203 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 SMTNL2Q2TAL5 461 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 QRICH1Q2TAL8 776 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 KLHL22Q53GT1 634 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 ZNF569Q5MCW4 686 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 PIK3CD-AS1Q5SR53 167 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 C6orf10Q5SRN2 563 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 RUSC1-AS1Q66K80 236 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 SNRNP48Q6IEG0 339 aaKnown RBP3.49□□□□□ -1.85
VPS13B-209ENST00000521559 C1orf228Q6PIY5 440 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 C16orf89Q6UX73 402 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 CCDC83Q8IWF9 413 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 DDIASQ8IXT1 998 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 SYTL1Q8IYJ3 562 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 NRSN1Q8IZ57 195 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 OR52N4Q8NGI2 321 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 PIBF1Q8WXW3 757 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 NPIPB3Q92617 1050 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 GTF3C6Q969F1 213 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 REXO5Q96IC2 774 aaKnown RBP3.49□□□□□ -1.85
VPS13B-209ENST00000521559 SGCZQ96LD1 299 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 LLPHQ9BRT6 129 aaKnown RBP3.49□□□□□ -1.85
VPS13B-209ENST00000521559 MAF1Q9H063 256 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 PORCNQ9H237 461 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 PLCB1Q9NQ66 1216 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 RNF146Q9NTX7 359 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 ORC3Q9UBD5 711 aaPredicted RBP3.49□□□□□ -1.85
VPS13B-209ENST00000521559 SEC63Q9UGP8 760 aaKnown RBP3.49□□□□□ -1.85
VPS13B-209ENST00000521559 FBXO40Q9UH90 709 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 GJD2Q9UKL4 321 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 UTS2RQ9UKP6 389 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 CCPG1Q9ULG6 757 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 LAMP3Q9UQV4 416 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 TNFSF13BQ9Y275 285 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 MRPL11Q9Y3B7 192 aaKnown RBP3.49□□□□□ -1.85
VPS13B-209ENST00000521559 MYO5AQ9Y4I1 1855 aaKnown RBP3.49□□□□□ -1.85
VPS13B-209ENST00000521559 SIPA1L1O43166 1804 aa3.49□□□□□ -1.85
VPS13B-209ENST00000521559 ABCB11O95342 1321 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 hCG_1642624A0A1W2PR95 340 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 GAGE12JA6NER3 117 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 M0QZQ0 153 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 RHODO00212 210 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 TNPO2O14787 897 aaKnown RBP3.48□□□□□ -1.85
VPS13B-209ENST00000521559 DHHO43323 396 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 SMAD6O43541 496 aaKnown RBP3.48□□□□□ -1.85
VPS13B-209ENST00000521559 DEXIO95424 95 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 NFATC1O95644 943 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 ANXA6P08133 673 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 FGF2P09038 288 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 HOXC6P09630 235 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 POLR2MP0CAP2 368 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 SCG2P13521 617 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 FDPSP14324 419 aaKnown RBP3.48□□□□□ -1.85
VPS13B-209ENST00000521559 TNFRSF1BP20333 461 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 HSPA7P48741 367 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 MRPL12P52815 198 aaKnown RBP3.48□□□□□ -1.85
VPS13B-209ENST00000521559 PRMT2P55345 433 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 SLC37A1P57057 533 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 HMGN5P82970 282 aaKnown RBP3.48□□□□□ -1.85
VPS13B-209ENST00000521559 GAD2Q05329 585 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 CUL4AQ13619 759 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 BAATQ14032 418 aaPredicted RBP3.48□□□□□ -1.85
VPS13B-209ENST00000521559 ERV3-1Q14264 604 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 KCTD2Q14681 263 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 PGM5Q15124 567 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 AAK1Q2M2I8 961 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 USH1GQ495M9 461 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 DGKKQ5KSL6 1271 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 WDR78Q5VTH9 848 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 ANKRD40Q6AI12 368 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 ERAP2Q6P179 960 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 XRRA1Q6P2D8 792 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 PGBD2Q6P3X8 592 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 GPR142Q7Z601 462 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 TRABD2AQ86V40 505 aa3.48□□□□□ -1.85
VPS13B-209ENST00000521559 PAQR4Q8N4S7 273 aaPredicted RBP3.48□□□□□ -1.85
VPS13B-209ENST00000521559 ZNF713Q8N859 430 aaPredicted RBP3.48□□□□□ -1.85
VPS13B-209ENST00000521559 CD99L2Q8TCZ2 262 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms