RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 SGF29Q96ES7 293 aa14.98□□□□□ -0.01
PRKDC-204ENST00000521331 PDXPQ96GD0 296 aa14.98□□□□□ -0.01
PRKDC-204ENST00000521331 CNPY3Q9BT09 278 aa14.98□□□□□ -0.01
PRKDC-204ENST00000521331 NUP62CLQ9H1M0 184 aa14.98□□□□□ -0.01
PRKDC-204ENST00000521331 VPS16Q9H269 839 aa14.98□□□□□ -0.01
PRKDC-204ENST00000521331 ATP13A3Q9H7F0 1226 aa14.98□□□□□ -0.01
PRKDC-204ENST00000521331 PDFQ9HBH1 243 aa14.98□□□□□ -0.01
PRKDC-204ENST00000521331 SEPT10Q9P0V9 454 aa14.98□□□□□ -0.01
PRKDC-204ENST00000521331 PISDQ9UG56 409 aa14.98□□□□□ -0.01
PRKDC-204ENST00000521331 LOXL2Q9Y4K0 774 aa14.98□□□□□ -0.01
PRKDC-204ENST00000521331 TNFRSF10CO14798 259 aa14.97□□□□□ -0.01
PRKDC-204ENST00000521331 EPHB6O15197 1021 aa14.97□□□□□ -0.01
PRKDC-204ENST00000521331 NOBOXO60393 691 aa14.97□□□□□ -0.01
PRKDC-204ENST00000521331 PRAMEF11O60813 436 aa14.97□□□□□ -0.01
PRKDC-204ENST00000521331 ITGB2P05107 769 aa14.97□□□□□ -0.01
PRKDC-204ENST00000521331 HOXC4P09017 264 aaPredicted RBP14.97□□□□□ -0.01
PRKDC-204ENST00000521331 HGFP14210 728 aa14.97□□□□□ -0.01
PRKDC-204ENST00000521331 SERPINA4P29622 427 aa14.97□□□□□ -0.01
PRKDC-204ENST00000521331 NDST2P52849 883 aa14.97□□□□□ -0.01
PRKDC-204ENST00000521331 TPI1P60174 286 aa14.97□□□□□ -0.01
PRKDC-204ENST00000521331 ZFP36L1Q07352 338 aaKnown RBP14.97□□□□□ -0.01
PRKDC-204ENST00000521331 KRT31Q15323 416 aa14.97□□□□□ -0.01
PRKDC-204ENST00000521331 TAF8Q7Z7C8 310 aa14.97□□□□□ -0.01
PRKDC-204ENST00000521331 CAMK1DQ8IU85 385 aa14.97□□□□□ -0.01
PRKDC-204ENST00000521331 Q8N9G6 341 aaPredicted RBP14.97□□□□□ -0.01
PRKDC-204ENST00000521331 FAM46DQ8NEK8 389 aa14.97□□□□□ -0.01
PRKDC-204ENST00000521331 ENOX1Q8TC92 643 aaKnown RBP14.97□□□□□ -0.01
PRKDC-204ENST00000521331 MCEEQ96PE7 176 aa14.97□□□□□ -0.01
PRKDC-204ENST00000521331 CMKLR1Q99788 373 aa14.97□□□□□ -0.01
PRKDC-204ENST00000521331 LRRC19Q9H756 370 aa14.97□□□□□ -0.01
PRKDC-204ENST00000521331 HEMK1Q9Y5R4 338 aaPredicted RBP14.97□□□□□ -0.01
PRKDC-204ENST00000521331 TCRBV5S1A1TA0A578 114 aa14.96□□□□□ -0.01
PRKDC-204ENST00000521331 ARHGAP42A6NI28 874 aa14.96□□□□□ -0.01
PRKDC-204ENST00000521331 EIF3CLB5ME19 914 aaKnown RBP14.96□□□□□ -0.01
PRKDC-204ENST00000521331 J3KR12 359 aa14.96□□□□□ -0.01
PRKDC-204ENST00000521331 NUDT21O43809 227 aaKnown RBP14.96□□□□□ -0.01
PRKDC-204ENST00000521331 BUB1BO60566 1050 aaPredicted RBP14.96□□□□□ -0.01
PRKDC-204ENST00000521331 RECQL5O94762 991 aaPredicted RBP14.96□□□□□ -0.01
PRKDC-204ENST00000521331 WISP1O95388 367 aa14.96□□□□□ -0.01
PRKDC-204ENST00000521331 ELFN1P0C7U0 828 aa14.96□□□□□ -0.01
PRKDC-204ENST00000521331 POLR2LP62875 67 aaKnown RBP14.96□□□□□ -0.01
PRKDC-204ENST00000521331 C14orf28Q4W4Y0 310 aa14.96□□□□□ -0.01
PRKDC-204ENST00000521331 CDKAL1Q5VV42 579 aa14.96□□□□□ -0.01
PRKDC-204ENST00000521331 SPRED1Q7Z699 444 aa14.96□□□□□ -0.01
PRKDC-204ENST00000521331 SRLQ86TD4 932 aa14.96□□□□□ -0.01
PRKDC-204ENST00000521331 ZSWIM9Q86XI8 627 aa14.96□□□□□ -0.01
PRKDC-204ENST00000521331 OR1E3Q8WZA6 343 aa14.96□□□□□ -0.01
PRKDC-204ENST00000521331 FUBP1Q96AE4 644 aaKnown RBP14.96□□□□□ -0.01
PRKDC-204ENST00000521331 EIF3CQ99613 913 aaKnown RBP14.96□□□□□ -0.01
PRKDC-204ENST00000521331 ARHGAP9Q9BRR9 750 aa14.96□□□□□ -0.01
PRKDC-204ENST00000521331 FAM117AQ9C073 453 aa14.96□□□□□ -0.01
PRKDC-204ENST00000521331 FGF22Q9HCT0 170 aa14.96□□□□□ -0.01
PRKDC-204ENST00000521331 SEPT11Q9NVA2 429 aaKnown RBP14.96□□□□□ -0.01
PRKDC-204ENST00000521331 SIK3Q9Y2K2 1263 aa14.96□□□□□ -0.01
PRKDC-204ENST00000521331 KIF26BQ2KJY2 2108 aa14.96□□□□□ -0.01
PRKDC-204ENST00000521331 TMEM202A6NGA9 273 aa14.95□□□□□ -0.02
PRKDC-204ENST00000521331 PDE2AO00408 941 aaPredicted RBP14.95□□□□□ -0.02
PRKDC-204ENST00000521331 PALMO75781 387 aa14.95□□□□□ -0.02
PRKDC-204ENST00000521331 PRKCGP05129 697 aa14.95□□□□□ -0.02
PRKDC-204ENST00000521331 ATXN8OSP0DMR3 200 aa14.95□□□□□ -0.02
PRKDC-204ENST00000521331 TRIM23P36406 574 aa14.95□□□□□ -0.02
PRKDC-204ENST00000521331 RPL7AP62424 266 aaKnown RBP14.95□□□□□ -0.02
PRKDC-204ENST00000521331 BCL2L1Q07817 233 aa14.95□□□□□ -0.02
PRKDC-204ENST00000521331 NFATC3Q12968 1075 aa14.95□□□□□ -0.02
PRKDC-204ENST00000521331 ARHGEF7Q14155 803 aa14.95□□□□□ -0.02
PRKDC-204ENST00000521331 HLTFQ14527 1009 aaKnown RBP eCLIP14.95□□□□□ -0.02
PRKDC-204ENST00000521331 TGIF1Q15583 401 aa14.95□□□□□ -0.02
PRKDC-204ENST00000521331 TSR1Q2NL82 804 aaKnown RBP14.95□□□□□ -0.02
PRKDC-204ENST00000521331 MANEAQ5SRI9 462 aa14.95□□□□□ -0.02
PRKDC-204ENST00000521331 PPP1R15BQ5SWA1 713 aa14.95□□□□□ -0.02
PRKDC-204ENST00000521331 KCTD16Q68DU8 428 aa14.95□□□□□ -0.02
PRKDC-204ENST00000521331 DCUN1D2Q6PH85 259 aa14.95□□□□□ -0.02
PRKDC-204ENST00000521331 NYAP1Q6ZVC0 841 aa14.95□□□□□ -0.02
PRKDC-204ENST00000521331 PRICKLE2Q7Z3G6 844 aa14.95□□□□□ -0.02
PRKDC-204ENST00000521331 EXD3Q8N9H8 876 aa14.95□□□□□ -0.02
PRKDC-204ENST00000521331 ZSCAN1Q8NBB4 408 aa14.95□□□□□ -0.02
PRKDC-204ENST00000521331 PLA2G15Q8NCC3 412 aa14.95□□□□□ -0.02
PRKDC-204ENST00000521331 KIAA1524Q8TCG1 905 aa14.95□□□□□ -0.02
PRKDC-204ENST00000521331 ECHDC3Q96DC8 303 aa14.95□□□□□ -0.02
PRKDC-204ENST00000521331 CELF6Q96J87 481 aaKnown RBP14.95□□□□□ -0.02
PRKDC-204ENST00000521331 B3GNT4Q9C0J1 378 aa14.95□□□□□ -0.02
PRKDC-204ENST00000521331 DPEP2Q9H4A9 486 aa14.95□□□□□ -0.02
PRKDC-204ENST00000521331 WDR26Q9H7D7 661 aa14.95□□□□□ -0.02
PRKDC-204ENST00000521331 LRIT1Q9P2V4 623 aa14.95□□□□□ -0.02
PRKDC-204ENST00000521331 PCDHB11Q9Y5F2 797 aa14.95□□□□□ -0.02
PRKDC-204ENST00000521331 RNF215Q9Y6U7 377 aa14.95□□□□□ -0.02
PRKDC-204ENST00000521331 A0A1W2PQC6 194 aa14.94□□□□□ -0.02
PRKDC-204ENST00000521331 B4DGG1 531 aa14.94□□□□□ -0.02
PRKDC-204ENST00000521331 SFTPCP11686 197 aa14.94□□□□□ -0.02
PRKDC-204ENST00000521331 CD82P27701 267 aa14.94□□□□□ -0.02
PRKDC-204ENST00000521331 PAPOLAP51003 745 aaKnown RBP14.94□□□□□ -0.02
PRKDC-204ENST00000521331 NSUN2Q08J23 767 aaKnown RBP eCLIP14.94□□□□□ -0.02
PRKDC-204ENST00000521331 RALGDSQ12967 914 aa14.94□□□□□ -0.02
PRKDC-204ENST00000521331 RFTN1Q14699 578 aaPredicted RBP14.94□□□□□ -0.02
PRKDC-204ENST00000521331 LINC00303Q3SY05 128 aa14.94□□□□□ -0.02
PRKDC-204ENST00000521331 AFMIDQ63HM1 303 aa14.94□□□□□ -0.02
PRKDC-204ENST00000521331 SPECC1LQ69YQ0 1117 aa14.94□□□□□ -0.02
PRKDC-204ENST00000521331 LIPIQ6XZB0 460 aa14.94□□□□□ -0.02
PRKDC-204ENST00000521331 DPPA4Q7L190 304 aa14.94□□□□□ -0.02
PRKDC-204ENST00000521331 SLITRK4Q8IW52 837 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms