RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 GCNAQ96QF7 691 aa11.41□□□□□ -0.58
CLK4-206ENST00000520878 DDX50Q9BQ39 737 aaKnown RBP11.41□□□□□ -0.58
CLK4-206ENST00000520878 ABCG8Q9H221 673 aa11.41□□□□□ -0.58
CLK4-206ENST00000520878 EML4Q9HC35 981 aaKnown RBP11.41□□□□□ -0.58
CLK4-206ENST00000520878 RNF112Q9ULX5 631 aa11.41□□□□□ -0.58
CLK4-206ENST00000520878 NVLO15381 856 aaKnown RBP11.4□□□□□ -0.58
CLK4-206ENST00000520878 IGLV3-25P01717 112 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 FGFR3P22607 806 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 CLCN5P51795 746 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 CYP4F8P98187 520 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 KRT72Q14CN4 511 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 PTPRRQ15256 657 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 LSM12Q3MHD2 195 aaKnown RBP11.4□□□□□ -0.58
CLK4-206ENST00000520878 PREPLQ4J6C6 727 aaPredicted RBP11.4□□□□□ -0.58
CLK4-206ENST00000520878 SCIMPQ6UWF3 145 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 FRA10AC1Q70Z53 315 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 FAM126BQ8IXS8 530 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 MAPK15Q8TD08 544 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 DNAJC9Q8WXX5 260 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 ANGPTL2Q9UKU9 493 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.4□□□□□ -0.58
CLK4-206ENST00000520878 COX4I1P13073 169 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 CCL5P13501 91 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 SLC6A4P31645 630 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 KLF10Q13118 480 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 SPATA24Q86W54 205 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 PTGR2Q8N8N7 351 aaPredicted RBP11.4□□□□□ -0.58
CLK4-206ENST00000520878 BCL7CQ8WUZ0 217 aaPredicted RBP11.4□□□□□ -0.58
CLK4-206ENST00000520878 IGSF21Q96ID5 467 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 RPL10LQ96L21 214 aaKnown RBP11.4□□□□□ -0.58
CLK4-206ENST00000520878 MRPL17Q9NRX2 175 aaKnown RBP11.4□□□□□ -0.58
CLK4-206ENST00000520878 PKP3Q9Y446 797 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 YIPF1Q9Y548 306 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 RAI2Q9Y5P3 530 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 PABPN1LA6NDY0 278 aaKnown RBP11.4□□□□□ -0.58
CLK4-206ENST00000520878 G3V2L1 256 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 ZBTB14O43829 449 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 PEX11AO75192 247 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 CLDN11O75508 207 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 CAPN15O75808 1086 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 PSMG1O95456 288 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 SEC24AO95486 1093 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 FGF1P05230 155 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 HLA-DPA1P20036 260 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 ZNF33AQ06730 810 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 CYLC2Q14093 348 aaPredicted RBP11.4□□□□□ -0.58
CLK4-206ENST00000520878 AGKQ53H12 422 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 PTRHD1Q6GMV3 140 aaKnown RBP11.4□□□□□ -0.58
CLK4-206ENST00000520878 NADSYN1Q6IA69 706 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 BEND5Q7L4P6 421 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 PDZD8Q8NEN9 1154 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 ZNF461Q8TAF7 563 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.4□□□□□ -0.58
CLK4-206ENST00000520878 ERLEC1Q96DZ1 483 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 CDK5RAP1Q96SZ6 601 aaKnown RBP11.4□□□□□ -0.58
CLK4-206ENST00000520878 CDRT15Q96T59 188 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 OLFM1Q99784 485 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 CORO1BQ9BR76 489 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 MKS1Q9NXB0 559 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 CD274Q9NZQ7 290 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 CPQQ9Y646 472 aa11.4□□□□□ -0.58
CLK4-206ENST00000520878 A0A087X1B8 175 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 ZNF840PA6NDX5 716 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 MUSKO15146 869 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 NDST3O95803 873 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 TBCCQ15814 346 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 RBBP7Q16576 425 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 PPM1LQ5SGD2 360 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 HPS6Q86YV9 775 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 PCDH20Q8N6Y1 951 aaKnown RBP11.39□□□□□ -0.59
CLK4-206ENST00000520878 PTCD3Q96EY7 689 aaKnown RBP11.39□□□□□ -0.59
CLK4-206ENST00000520878 SORT1Q99523 831 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 EGFL8Q99944 293 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 APOL5Q9BWW9 433 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 ADGRE3Q9BY15 652 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 MID1IP1Q9NPA3 183 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 SEMA4BQ9NPR2 832 aaPredicted RBP11.39□□□□□ -0.59
CLK4-206ENST00000520878 ANGPTL3Q9Y5C1 460 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 TMEM189-UBE2V1I3L0A0 370 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 BTN3A1O00481 513 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 SIX3O95343 332 aaPredicted RBP11.39□□□□□ -0.59
CLK4-206ENST00000520878 TRIM16O95361 564 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 THRAP10827 490 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 MAPKAPK2P49137 400 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 HERC6Q8IVU3 1022 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 CENPLQ8N0S6 344 aaPredicted RBP11.39□□□□□ -0.59
CLK4-206ENST00000520878 ELMOD1Q8N336 334 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 TRPC4APQ8TEL6 797 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 RNF38Q9H0F5 515 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 MAGEH1Q9H213 219 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 TRMT6Q9UJA5 497 aaKnown RBP11.39□□□□□ -0.59
CLK4-206ENST00000520878 WASF2Q9Y6W5 498 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 TET1Q8NFU7 2136 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 C9JVG2 144 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 INSIG1O15503 277 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 H2AFYO75367 372 aaKnown RBP11.39□□□□□ -0.59
CLK4-206ENST00000520878 COL6A1P12109 1028 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 GM2AP17900 193 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 GKP32189 559 aa11.39□□□□□ -0.59
CLK4-206ENST00000520878 CDH4P55283 916 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms