RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 LDB1Q86U70 411 aaPredicted RBP18.54■□□□□ 0.56
FAM49B-214ENST00000519540 LPCAT1Q8NF37 534 aa18.54■□□□□ 0.56
FAM49B-214ENST00000519540 MDGA1Q8NFP4 955 aa18.54■□□□□ 0.56
FAM49B-214ENST00000519540 FIBINQ8TAL6 211 aa18.54■□□□□ 0.56
FAM49B-214ENST00000519540 SH3RF2Q8TEC5 729 aa18.54■□□□□ 0.56
FAM49B-214ENST00000519540 NDNQ99608 321 aa18.54■□□□□ 0.56
FAM49B-214ENST00000519540 ADGRE3Q9BY15 652 aa18.54■□□□□ 0.56
FAM49B-214ENST00000519540 NLE1Q9NVX2 485 aaPredicted RBP18.54■□□□□ 0.56
FAM49B-214ENST00000519540 KCNK4Q9NYG8 393 aa18.54■□□□□ 0.56
FAM49B-214ENST00000519540 CCL26Q9Y258 94 aa18.54■□□□□ 0.56
FAM49B-214ENST00000519540 BPTFQ12830 3046 aa18.54■□□□□ 0.56
FAM49B-214ENST00000519540 ANKRD36A6QL64 1941 aa18.54■□□□□ 0.56
FAM49B-214ENST00000519540 ANKRD66B4E2M5 251 aa18.54■□□□□ 0.56
FAM49B-214ENST00000519540 C5orf67F2Z3F1 127 aa18.54■□□□□ 0.56
FAM49B-214ENST00000519540 K7ERQ8 282 aa18.54■□□□□ 0.56
FAM49B-214ENST00000519540 CD3EAPO15446 510 aaKnown RBP18.54■□□□□ 0.56
FAM49B-214ENST00000519540 LYPLA1O75608 230 aaPredicted RBP18.54■□□□□ 0.56
FAM49B-214ENST00000519540 SBK3P0C264 359 aa18.54■□□□□ 0.56
FAM49B-214ENST00000519540 MYL2P10916 166 aa18.54■□□□□ 0.56
FAM49B-214ENST00000519540 ZNF140P52738 457 aaPredicted RBP18.54■□□□□ 0.56
FAM49B-214ENST00000519540 SLC12A2P55011 1212 aa18.54■□□□□ 0.56
FAM49B-214ENST00000519540 ITGA9Q13797 1035 aa18.54■□□□□ 0.56
FAM49B-214ENST00000519540 RETSATQ6NUM9 610 aa18.54■□□□□ 0.56
FAM49B-214ENST00000519540 MTDHQ86UE4 582 aaKnown RBP18.54■□□□□ 0.56
FAM49B-214ENST00000519540 CMTM8Q8IZV2 173 aa18.54■□□□□ 0.56
FAM49B-214ENST00000519540 RDH11Q8TC12 318 aa18.54■□□□□ 0.56
FAM49B-214ENST00000519540 ACDQ96AP0 544 aa18.54■□□□□ 0.56
FAM49B-214ENST00000519540 CDKN2AIPNLQ96HQ2 116 aa18.54■□□□□ 0.56
FAM49B-214ENST00000519540 GPR78Q96P69 363 aa18.54■□□□□ 0.56
FAM49B-214ENST00000519540 ECT2Q9H8V3 914 aa18.54■□□□□ 0.56
FAM49B-214ENST00000519540 KIAA1522Q9P206 1035 aaPredicted RBP18.54■□□□□ 0.56
FAM49B-214ENST00000519540 CPSF2Q9P2I0 782 aaKnown RBP18.54■□□□□ 0.56
FAM49B-214ENST00000519540 HEY2Q9UBP5 337 aa18.54■□□□□ 0.56
FAM49B-214ENST00000519540 NUMBLQ9Y6R0 609 aa18.54■□□□□ 0.56
FAM49B-214ENST00000519540 A0A087X1B8 175 aa18.53■□□□□ 0.56
FAM49B-214ENST00000519540 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.53■□□□□ 0.56
FAM49B-214ENST00000519540 GRM6O15303 877 aa18.53■□□□□ 0.56
FAM49B-214ENST00000519540 DNAJC6O75061 913 aa18.53■□□□□ 0.56
FAM49B-214ENST00000519540 ARHGEF15O94989 841 aa18.53■□□□□ 0.56
FAM49B-214ENST00000519540 KLHL2O95198 593 aa18.53■□□□□ 0.56
FAM49B-214ENST00000519540 PSMA3P25788 255 aa18.53■□□□□ 0.56
FAM49B-214ENST00000519540 DDX6P26196 483 aaKnown RBP eCLIP18.53■□□□□ 0.563e-15■■□□□ 11.6
FAM49B-214ENST00000519540 NCALDP61601 193 aa18.53■□□□□ 0.56
FAM49B-214ENST00000519540 LMAN2Q12907 356 aa18.53■□□□□ 0.56
FAM49B-214ENST00000519540 DLG1Q12959 904 aa18.53■□□□□ 0.56
FAM49B-214ENST00000519540 TEAD2Q15562 447 aa18.53■□□□□ 0.56
FAM49B-214ENST00000519540 HSF5Q4G112 596 aaPredicted RBP18.53■□□□□ 0.56
FAM49B-214ENST00000519540 RALGPS1Q5JS13 557 aa18.53■□□□□ 0.56
FAM49B-214ENST00000519540 GLT6D1Q7Z4J2 308 aa18.53■□□□□ 0.56
FAM49B-214ENST00000519540 FSTL5Q8N475 847 aaPredicted RBP18.53■□□□□ 0.56
FAM49B-214ENST00000519540 NXNL1Q96CM4 212 aa18.53■□□□□ 0.56
FAM49B-214ENST00000519540 SMIM14Q96QK8 99 aa18.53■□□□□ 0.56
FAM49B-214ENST00000519540 OLFM1Q99784 485 aa18.53■□□□□ 0.56
FAM49B-214ENST00000519540 MID2Q9UJV3 735 aa18.53■□□□□ 0.56
FAM49B-214ENST00000519540 HELZP42694 1942 aaKnown RBP18.53■□□□□ 0.56
FAM49B-214ENST00000519540 H0YHG0 523 aa18.52■□□□□ 0.56
FAM49B-214ENST00000519540 RHOP08100 348 aa18.52■□□□□ 0.56
FAM49B-214ENST00000519540 KITP10721 976 aa18.52■□□□□ 0.56
FAM49B-214ENST00000519540 EPCAMP16422 314 aa18.52■□□□□ 0.56
FAM49B-214ENST00000519540 ARRB2P32121 409 aa18.52■□□□□ 0.56
FAM49B-214ENST00000519540 SLC8A1P32418 973 aa18.52■□□□□ 0.56
FAM49B-214ENST00000519540 SPDYAQ5MJ70 313 aa18.52■□□□□ 0.56
FAM49B-214ENST00000519540 ATXN7L2Q5T6C5 722 aaPredicted RBP18.52■□□□□ 0.56
FAM49B-214ENST00000519540 MRNIPQ6NTE8 343 aa18.52■□□□□ 0.56
FAM49B-214ENST00000519540 ATG14Q6ZNE5 492 aa18.52■□□□□ 0.56
FAM49B-214ENST00000519540 OR4L1Q8NH43 312 aa18.52■□□□□ 0.56
FAM49B-214ENST00000519540 PDCD6IPQ8WUM4 868 aaKnown RBP18.52■□□□□ 0.56
FAM49B-214ENST00000519540 SCYL1Q96KG9 808 aa18.52■□□□□ 0.56
FAM49B-214ENST00000519540 MCOLN1Q9GZU1 580 aa18.52■□□□□ 0.56
FAM49B-214ENST00000519540 MTIF3Q9H2K0 278 aaKnown RBP18.52■□□□□ 0.56
FAM49B-214ENST00000519540 OXSMQ9NWU1 459 aa18.52■□□□□ 0.56
FAM49B-214ENST00000519540 MARCOQ9UEW3 520 aaPredicted RBP18.52■□□□□ 0.56
FAM49B-214ENST00000519540 VWA7Q9Y334 891 aa18.52■□□□□ 0.56
FAM49B-214ENST00000519540 C2orf81A6NN90 581 aa18.52■□□□□ 0.55
FAM49B-214ENST00000519540 TARM1B6A8C7 271 aa18.52■□□□□ 0.55
FAM49B-214ENST00000519540 TK2O00142 265 aa18.52■□□□□ 0.55
FAM49B-214ENST00000519540 TRIM13O60858 407 aa18.52■□□□□ 0.55
FAM49B-214ENST00000519540 CYBBP04839 570 aa18.52■□□□□ 0.55
FAM49B-214ENST00000519540 MYOGP15173 224 aa18.52■□□□□ 0.55
FAM49B-214ENST00000519540 CD70P32970 193 aa18.52■□□□□ 0.55
FAM49B-214ENST00000519540 GLRBP48167 497 aa18.52■□□□□ 0.55
FAM49B-214ENST00000519540 ABCE1P61221 599 aaKnown RBP18.52■□□□□ 0.55
FAM49B-214ENST00000519540 SEMA3AQ14563 771 aa18.52■□□□□ 0.55
FAM49B-214ENST00000519540 HECTD2Q5U5R9 776 aa18.52■□□□□ 0.55
FAM49B-214ENST00000519540 LRRC8EQ6NSJ5 796 aa18.52■□□□□ 0.55
FAM49B-214ENST00000519540 ZYG11AQ6WRX3 759 aa18.52■□□□□ 0.55
FAM49B-214ENST00000519540 OR4K2Q8NGD2 314 aa18.52■□□□□ 0.55
FAM49B-214ENST00000519540 SORT1Q99523 831 aa18.52■□□□□ 0.55
FAM49B-214ENST00000519540 ZFP69BQ9UJL9 534 aa18.52■□□□□ 0.55
FAM49B-214ENST00000519540 SMAD6O43541 496 aaKnown RBP18.51■□□□□ 0.55
FAM49B-214ENST00000519540 FZD6O60353 706 aa18.51■□□□□ 0.55
FAM49B-214ENST00000519540 CLASP2O75122 1294 aaKnown RBP18.51■□□□□ 0.55
FAM49B-214ENST00000519540 SERPINB3P29508 390 aa18.51■□□□□ 0.55
FAM49B-214ENST00000519540 HOXA9P31269 272 aa18.51■□□□□ 0.55
FAM49B-214ENST00000519540 PLK1P53350 603 aa18.51■□□□□ 0.55
FAM49B-214ENST00000519540 ILF2Q12905 390 aaKnown RBP18.51■□□□□ 0.55
FAM49B-214ENST00000519540 SLC5A9Q2M3M2 681 aa18.51■□□□□ 0.55
FAM49B-214ENST00000519540 TSNAXIP1Q2TAA8 658 aa18.51■□□□□ 0.55
FAM49B-214ENST00000519540 PLEKHG6Q3KR16 790 aa18.51■□□□□ 0.55
FAM49B-214ENST00000519540 ARHGAP15Q53QZ3 475 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms