RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 METTL7BQ6UX53 244 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 C4orf50Q6ZRC1 276 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 USP50Q70EL3 339 aaPredicted RBP5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 OTUD6AQ7L8S5 288 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 CLNKQ7Z7G1 428 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 FBXO16Q8IX29 292 aaPredicted RBP5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 GSPT2Q8IYD1 628 aaKnown RBP5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 ANKRD35Q8N283 1001 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 MMGT1Q8N4V1 131 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 MBD3L2Q8NHZ7 208 aaPredicted RBP5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 CAGE1Q8TC20 777 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 TAS1R2Q8TE23 839 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 AFAP1L1Q8TED9 768 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 ZNF483Q8TF39 744 aaPredicted RBP5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 U2AF1L4Q8WU68 220 aaKnown RBP5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 TMEM143Q96AN5 459 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 OPTNQ96CV9 577 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 ARHGEF26Q96DR7 871 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 ZDHHC12Q96GR4 267 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 GNRHR2Q96P88 292 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 PSMB7Q99436 277 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 ZSWIM1Q9BR11 485 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 NTPCRQ9BSD7 190 aaKnown RBP5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 FUT8Q9BYC5 575 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 GPR63Q9BZJ6 419 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 PORCNQ9H237 461 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 GOLPH3Q9H4A6 298 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 DHX33Q9H6R0 707 aaKnown RBP5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 CHODLQ9H9P2 273 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 C17orf75Q9HAS0 396 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 FSCN3Q9NQT6 498 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 ZNF302Q9NR11 478 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 NDUFAF4Q9P032 175 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 NOCTQ9UK39 431 aaKnown RBP5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 ARHGAP26Q9UNA1 814 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 PACSIN2Q9UNF0 486 aaPredicted RBP5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 EXOC7Q9UPT5 735 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 BZW2Q9Y6E2 419 aaKnown RBP5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 PTPRJQ12913 1337 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 FAM170AA1A519 330 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 TARSL2A2RTX5 802 aaKnown RBP5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 H3BQF6 201 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 LEFTY2O00292 366 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 LAMTOR5O43504 91 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 ATP8B1O43520 1251 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 RPP40O75818 363 aaKnown RBP5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 SGPL1O95470 568 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 GGPS1O95749 300 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 SLC25A27O95847 323 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 GPANK1O95872 356 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 LMNAP02545 664 aaKnown RBP5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 H2AFZP0C0S5 128 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 CHRNB2P17787 502 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 APOBEC3AP31941 199 aaPredicted RBP5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 COPB2P35606 906 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 NAMPTP43490 491 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 KCNC1P48547 511 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 PDE6CP51160 858 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 DNA2P51530 1060 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 GPC3P51654 580 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 POLGP54098 1239 aaPredicted RBP5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 GALCP54803 685 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 NR1H2P55055 460 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 NLRP11P59045 1033 aaKnown RBP5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 MRPS25P82663 173 aaKnown RBP5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 MAP2K1Q02750 393 aaPredicted RBP5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 ITIH3Q06033 890 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 DRP2Q13474 957 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 CAPSQ13938 189 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 CCNIQ14094 377 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 LY6KQ17RY6 165 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 TMEM63BQ5T3F8 832 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 RBM20Q5T481 1227 aaKnown RBP5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 FAM102AQ5T9C2 384 aaPredicted RBP5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 C15orf39Q6ZRI6 1047 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 RINLQ6ZS11 566 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 H2AFVQ71UI9 128 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 SLFN11Q7Z7L1 901 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 FAM71AQ8IYT1 594 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 GPD1LQ8N335 351 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 FSTL5Q8N475 847 aaPredicted RBP5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 CCDC89Q8N998 374 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 SPATA4Q8NEY3 305 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 HDAC7Q8WUI4 952 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 UCMAQ8WVF2 138 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 HMGB4Q8WW32 186 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 RFFLQ8WZ73 363 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 POMGNT1Q8WZA1 660 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 SHC3Q92529 594 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 CCDC127Q96BQ5 260 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 MIEF2Q96C03 454 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 MS4A14Q96JA4 679 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 RPGRIP1Q96KN7 1286 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 IFT74Q96LB3 600 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 PCDHB18PQ96TA0 734 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 SLC38A3Q99624 504 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 GPR20Q99678 358 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 AGPAT1Q99943 283 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 NUDT22Q9BRQ3 303 aa5.01□□□□□ -1.61
CTNNA1-212ENST00000518919 NOD2Q9HC29 1040 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms