RNA–Protein interactions for RNA: ENST00000516600.1

SCARNA21.2-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.2-201ENST00000516600 LEFTY1O75610 366 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 GABBR2O75899 941 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 SLCO2B1O94956 709 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 RAF1P04049 648 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 PYGMP11217 842 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 CPA1P15085 419 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 CA5AP35218 305 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 ARCN1P48444 511 aaKnown RBP5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 PDE1BQ01064 536 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 ATP1A4Q13733 1029 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 RAPGEF1Q13905 1077 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 KEAP1Q14145 624 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 IRF4Q15306 451 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 ZRSR1Q15695 479 aaKnown RBP5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 HIF1AQ16665 826 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 KRTAP24-1Q3LI83 254 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 TTC22Q5TAA0 569 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 SHEQ5VZ18 495 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 KRT79Q5XKE5 535 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 KCTD16Q68DU8 428 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 FAM199XQ6PEV8 388 aaPredicted RBP5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 WDR74Q6RFH5 385 aaPredicted RBP5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 TRAPPC11Q7Z392 1133 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 KCNK18Q7Z418 384 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 UNC45BQ8IWX7 931 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 CIARTQ8N365 385 aaPredicted RBP5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 GALNT16Q8N428 558 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 SH2D3CQ8N5H7 860 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 PPM1NQ8N819 430 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 C12orf29Q8N999 325 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 DNAAF3Q8N9W5 541 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 CLEC1AQ8NC01 280 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 CHST14Q8NCH0 376 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 ZSWIM2Q8NEG5 633 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 OR2A12Q8NGT7 310 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 CCL4L1Q8NHW4 92 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 NCSTNQ92542 709 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 NR4A3Q92570 626 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 TNFRSF25Q93038 417 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 SLC38A3Q99624 504 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 C19orf24Q9BVV8 132 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 RAB34Q9BZG1 259 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 RNF32Q9H0A6 362 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 TMEM168Q9H0V1 697 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 CLEC4MQ9H2X3 399 aaPredicted RBP5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 ZNF552Q9H707 407 aaPredicted RBP5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 ZBTB20Q9HC78 741 aaPredicted RBP5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 SPATS2LQ9NUQ6 558 aaKnown RBP5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 STK17AQ9UEE5 414 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 ITM2BQ9Y287 266 aa5.68□□□□□ -1.5
SCARNA21.2-201ENST00000516600 SVEP1Q4LDE5 3571 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 RNF103O00237 685 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 SPTLC2O15270 562 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 ARHGEF9O43307 516 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 THAP12O43422 761 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 STX6O43752 255 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 SLC19A2O60779 497 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 SPAG6O75602 509 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 CTAG2O75638 210 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 TM7SF2O76062 418 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 FGF1P05230 155 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 CD19P15391 556 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 MSX1P28360 303 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 L1CAMP32004 1257 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 NKX6-1P78426 367 aaPredicted RBP5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 NUCB2P80303 420 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 NUCB1Q02818 461 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 TRPC3Q13507 836 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 LAMB3Q13751 1172 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 INPP5AQ14642 412 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 PRKD1Q15139 912 aaPredicted RBP5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 TLR1Q15399 786 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 SURF1Q15526 300 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 MS4A13Q5J8X5 152 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 NADSYN1Q6IA69 706 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 FOXR2Q6PJQ5 311 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 PAMR1Q6UXH9 720 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 SCARA5Q6ZMJ2 495 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 PPP1R3BQ86XI6 285 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 ZNF761Q86XN6 746 aaPredicted RBP5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 KRTAP1-3Q8IUG1 177 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 DMRTC2Q8IXT2 367 aaPredicted RBP5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 TP53I13Q8NBR0 393 aaPredicted RBP5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 GOT1L1Q8NHS2 421 aaPredicted RBP5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 ADAMTS18Q8TE60 1221 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 PATE1Q8WXA2 126 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 OR1E3Q8WZA6 343 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 RAB7BQ96AH8 199 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 ARHGEF26Q96DR7 871 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 MYEOVQ96EZ4 313 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 PPP1R9BQ96SB3 815 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 REEP2Q9BRK0 252 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 TRIM56Q9BRZ2 755 aaKnown RBP5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 APOOQ9BUR5 198 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 AMBRA1Q9C0C7 1298 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 IKZF4Q9H2S9 585 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 LRFN1Q9P244 771 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 APEX2Q9UBZ4 518 aa5.67□□□□□ -1.5
SCARNA21.2-201ENST00000516600 SEC14L3Q9UDX4 400 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms