RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 SGCDQ92629 289 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 KAT2BQ92831 832 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CAVIN3Q969G5 261 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 REPS1Q96D71 796 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 P2RY11Q96G91 374 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ZNF419Q96HQ0 510 aaPredicted RBP3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 LINC00615Q96LM1 132 aaPredicted RBP3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TMEM68Q96MH6 324 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 BBC3Q96PG8 261 aaPredicted RBP3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TMEM47Q9BQJ4 181 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 GOLPH3LQ9H4A5 285 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 DBNDD1Q9H9R9 158 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MAGEE1Q9HCI5 957 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PARD6AQ9NPB6 346 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CHCHD3Q9NX63 227 aaKnown RBP3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 SYBUQ9NX95 663 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 COQ3Q9NZJ6 369 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 FOXJ2Q9P0K8 574 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 DNAJB9Q9UBS3 223 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 POMT1Q9Y6A1 747 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CEPT1Q9Y6K0 416 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 UTYO14607 1347 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 LOC100509620A0A075B734 347 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TRAV34A0A0B4J273 112 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 A0A0U1RQF3 1178 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 A0A1B0GVM2 712 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 LNP1A1A4G5 178 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 H0YAE9 185 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 SMIM22K7EJ46 135 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MGST3O14880 152 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 INPPL1O15357 1258 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 OGG1O15527 345 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 SPRY1O43609 319 aaPredicted RBP3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 KLK8O60259 260 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ZNF202O95125 648 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 GOSR1O95249 250 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ESRRBO95718 433 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PLAUP00749 431 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ETFAP13804 333 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ATP5F1P24539 256 aaPredicted RBP3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 EPHB2P29323 1055 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CENPAP49450 140 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CCR3P51677 355 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 POLGP54098 1239 aaPredicted RBP3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CSE1LP55060 971 aaKnown RBP3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TMF1P82094 1093 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PMPCAQ10713 525 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PKP1Q13835 747 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 NFE2L1Q14494 772 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ZNF674Q2M3X9 581 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ESCO2Q56NI9 601 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 C6orf141Q5SZD1 244 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MPP7Q5T2T1 576 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 KRT79Q5XKE5 535 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PLBD1Q6P4A8 553 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PET117Q6UWS5 81 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 LRIG3Q6UXM1 1119 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 Q6YL49 198 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 RBPMS2Q6ZRY4 209 aaKnown RBP3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CAMKMTQ7Z624 323 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 AMIGO2Q86SJ2 522 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 SCYL3Q8IZE3 742 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 DPP10Q8N608 796 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ZBTB2Q8N680 514 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 XXYLT1Q8NBI6 393 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MCUQ8NE86 351 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PTPMT1Q8WUK0 201 aaPredicted RBP3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TEKT4Q8WW24 435 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 LINC00476Q8WZB0 136 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 LRRC59Q96AG4 307 aaKnown RBP3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 RRNAD1Q96FB5 475 aaKnown RBP3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PDLIM2Q96JY6 352 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 RITA1Q96K30 269 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PPP1R13BQ96KQ4 1090 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CEP295NLQ96MC4 621 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 RAB3IPQ96QF0 476 aaPredicted RBP3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CDRT15Q96T59 188 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 SCNM1Q9BWG6 230 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MOV10Q9HCE1 1003 aaKnown RBP3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 DDX4Q9NQI0 724 aaKnown RBP3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CWC25Q9NXE8 425 aaPredicted RBP3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PSD3Q9NYI0 1048 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 AMACRQ9UHK6 382 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 IPO11Q9UI26 975 aaKnown RBP3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TUBE1Q9UJT0 475 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ADAM21Q9UKJ8 722 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TESMINQ9Y4I5 508 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 EPN1Q9Y6I3 576 aaPredicted RBP3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 A3GALT2U3KPV4 340 aa3.34□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TRBV5-7A0A0A0MS05 114 aa3.33□□□□□ -1.88
SCARNA15.2-201ENST00000516409 GPR75-ASB3A0A0A6YYF3 556 aa3.33□□□□□ -1.88
SCARNA15.2-201ENST00000516409 A0A0G2JLL6 359 aaPredicted RBP3.33□□□□□ -1.88
SCARNA15.2-201ENST00000516409 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.33□□□□□ -1.88
SCARNA15.2-201ENST00000516409 TCRBV21S2A2A0A5A6 115 aa3.33□□□□□ -1.88
SCARNA15.2-201ENST00000516409 ARHGEF37A1IGU5 675 aa3.33□□□□□ -1.88
SCARNA15.2-201ENST00000516409 POC1B-GALNT4F8VUJ3 575 aa3.33□□□□□ -1.88
SCARNA15.2-201ENST00000516409 UBE2Q2LH0YL09 131 aa3.33□□□□□ -1.88
SCARNA15.2-201ENST00000516409 K7ESM1 405 aa3.33□□□□□ -1.88
SCARNA15.2-201ENST00000516409 RNMTO43148 476 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms