RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 EME2A4GXA9 379 aaPredicted RBP13.73□□□□□ -0.21
TCOF1-215ENST00000515516 A8MX80 341 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 MUSKO15146 869 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 YY2O15391 372 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 MAFKO60675 156 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 SOCS5O75159 536 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 GCATO75600 419 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 RECQL5O94762 991 aaPredicted RBP13.73□□□□□ -0.21
TCOF1-215ENST00000515516 H2AFZP0C0S5 128 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 KRT10P13645 584 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 KELP23276 732 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 GJC1P36383 396 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 MMP13P45452 471 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 SRP54P61011 504 aaKnown RBP13.73□□□□□ -0.21
TCOF1-215ENST00000515516 SLC25A11Q02978 314 aaKnown RBP13.73□□□□□ -0.21
TCOF1-215ENST00000515516 ITKQ08881 620 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 TRIM14Q14142 442 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 ALG11Q2TAA5 492 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 RALGPS1Q5JS13 557 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 C6orf132Q5T0Z8 1188 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 CDCP2Q5VXM1 449 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 TXNRD3NBQ6F5E7 133 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 GUSBP11Q6P575 273 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 LVRNQ6Q4G3 990 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 LIPIQ6XZB0 460 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 H2AFVQ71UI9 128 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 DPPA4Q7L190 304 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 MAP7D3Q8IWC1 876 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 NDUFAF2Q8N183 169 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 SDR16C5Q8N3Y7 309 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 KCTD6Q8NC69 237 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 NAT6Q93015 286 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 WDR92Q96MX6 357 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 NUDCD1Q96RS6 583 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 BOCQ9BWV1 1114 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 XPO4Q9C0E2 1151 aaKnown RBP13.73□□□□□ -0.21
TCOF1-215ENST00000515516 KCTD5Q9NXV2 234 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 UVRAGQ9P2Y5 699 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 GULP1Q9UBP9 304 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 PHTF1Q9UMS5 762 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 PCDHGC4Q9Y5F7 938 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 LY6G6EA0A0G2JKS1 128 aa13.72□□□□□ -0.21
TCOF1-215ENST00000515516 TTC24A2A3L6 582 aaPredicted RBP13.72□□□□□ -0.21
TCOF1-215ENST00000515516 PDE2AO00408 941 aaPredicted RBP13.72□□□□□ -0.21
TCOF1-215ENST00000515516 TRAFD1O14545 582 aaPredicted RBP13.72□□□□□ -0.21
TCOF1-215ENST00000515516 BRINP1O60477 761 aa13.72□□□□□ -0.21
TCOF1-215ENST00000515516 USP12O75317 370 aa13.72□□□□□ -0.21
TCOF1-215ENST00000515516 CSO75390 466 aaKnown RBP13.72□□□□□ -0.21
TCOF1-215ENST00000515516 CPP00450 1065 aa13.72□□□□□ -0.21
TCOF1-215ENST00000515516 CYP2A6P11509 494 aaPredicted RBP13.72□□□□□ -0.21
TCOF1-215ENST00000515516 ABCG1P45844 678 aa13.72□□□□□ -0.21
TCOF1-215ENST00000515516 SPECC1LQ69YQ0 1117 aa13.72□□□□□ -0.21
TCOF1-215ENST00000515516 PDZD3Q86UT5 571 aa13.72□□□□□ -0.21
TCOF1-215ENST00000515516 LSMEM2Q8N112 164 aa13.72□□□□□ -0.21
TCOF1-215ENST00000515516 OR8K1Q8NGG5 319 aa13.72□□□□□ -0.21
TCOF1-215ENST00000515516 WDR48Q8TAF3 677 aa13.72□□□□□ -0.21
TCOF1-215ENST00000515516 FGF11Q92914 225 aa13.72□□□□□ -0.21
TCOF1-215ENST00000515516 GRAMD1AQ96CP6 724 aa13.72□□□□□ -0.21
TCOF1-215ENST00000515516 MGME1Q9BQP7 344 aa13.72□□□□□ -0.21
TCOF1-215ENST00000515516 NOD2Q9HC29 1040 aa13.72□□□□□ -0.21
TCOF1-215ENST00000515516 PADI4Q9UM07 663 aa13.72□□□□□ -0.21
TCOF1-215ENST00000515516 U3KQA8 63 aa13.72□□□□□ -0.21
TCOF1-215ENST00000515516 HTRA2O43464 458 aaPredicted RBP13.71□□□□□ -0.21
TCOF1-215ENST00000515516 AKR1B10O60218 316 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 PROSCO94903 275 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 KRT7P08729 469 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 HNRNPH3P31942 346 aaKnown RBP13.71□□□□□ -0.21
TCOF1-215ENST00000515516 VIPR1P32241 457 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 KIAA1024LP59773 190 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 MAXP61244 160 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 RALGDSQ12967 914 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 MMRN1Q13201 1228 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 ARHGEF7Q14155 803 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 PDK2Q15119 407 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 TCEA2Q15560 299 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 SLC18A3Q16572 532 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 ARMC12Q5T9G4 340 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 DENND2CQ68D51 928 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 TIGD7Q6NT04 549 aaPredicted RBP13.71□□□□□ -0.21
TCOF1-215ENST00000515516 RBM44Q6ZP01 1051 aaKnown RBP13.71□□□□□ -0.21
TCOF1-215ENST00000515516 USP45Q70EL2 814 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 SLC35F3Q8IY50 421 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 ARL10Q8N8L6 244 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 PLA2G15Q8NCC3 412 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 OR56A4Q8NGH8 313 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 ANP32EQ9BTT0 268 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 CLPBQ9H078 707 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 WDR26Q9H7D7 661 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 SYNDIG1Q9H7V2 258 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 NT5MQ9NPB1 228 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 SIRPGQ9P1W8 387 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 B4GALT6Q9UBX8 382 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 MOSPD1Q9UJG1 213 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 PNMA8BQ9ULN7 279 aaPredicted RBP13.71□□□□□ -0.21
TCOF1-215ENST00000515516 GPR34Q9UPC5 381 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 PCDHB1Q9Y5F3 818 aa13.71□□□□□ -0.21
TCOF1-215ENST00000515516 PLXNB3Q9ULL4 1909 aa13.7□□□□□ -0.22
TCOF1-215ENST00000515516 TRPM6Q9BX84 2022 aa13.7□□□□□ -0.22
TCOF1-215ENST00000515516 TNFRSF10CO14798 259 aa13.7□□□□□ -0.22
TCOF1-215ENST00000515516 TCEA3O75764 348 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms