RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 H3BSA7 217 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 AXIN1O15169 862 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 NUPL2O15504 423 aaKnown RBP7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 USP12O75317 370 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 SPAG7O75391 227 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 VTNP04004 478 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 BRAFP15056 766 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 CD19P15391 556 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 CDH2P19022 906 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 ROR1Q01973 937 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 LGALS3BPQ08380 585 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 INCA1Q0VD86 236 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 STAT4Q14765 748 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 MORF4L2Q15014 288 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 PDK3Q15120 406 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 C5orf22Q49AR2 442 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 ACSBG2Q5FVE4 666 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 ZNF484Q5JVG2 852 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 CACHD1Q5VU97 1274 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 ANKRD22Q5VYY1 191 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 BBS12Q6ZW61 710 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 ARPINQ7Z6K5 226 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 ZNF410Q86VK4 478 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 ADCY4Q8NFM4 1077 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 OR5H6Q8NGV6 325 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 CKAP2Q8WWK9 683 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 ST8SIA2Q92186 375 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 TMEM176AQ96HP8 235 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 SLC6A17Q9H1V8 727 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 TMEM245Q9H330 911 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 SAYSD1Q9NPB0 183 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 POLR3BQ9NW08 1133 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 GINS2Q9Y248 185 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 HCN4Q9Y3Q4 1203 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 NME7Q9Y5B8 376 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 CCDC78A2IDD5 438 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 OR5K3A6NET4 321 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 C12orf71A8MTZ7 269 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 TOR1AO14656 332 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 MED7O43513 233 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 CCNT2O60583 730 aaKnown RBP7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 PFKMP08237 780 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 ZNF286BP0CG31 522 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 AP2S1P53680 142 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 GPX6P59796 221 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 CCNA1P78396 465 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 BEX3Q00994 111 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 SGCGQ13326 291 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 COTL1Q14019 142 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 MSS51Q4VC12 460 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 MARCH8Q5T0T0 291 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 SH3PXD2AQ5TCZ1 1133 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 ITPRIPL1Q6GPH6 555 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 RANBP10Q6VN20 620 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 TDRPQ86YL5 185 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 AFAP1L2Q8N4X5 818 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 ZNF527Q8NB42 609 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 ACTL9Q8TC94 416 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 AGR3Q8TD06 166 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 AFG1LQ8WV93 481 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 ASZ1Q8WWH4 475 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 SNX19Q92543 992 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 EMID1Q96A84 441 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 TMEM68Q96MH6 324 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 RANBP9Q96S59 729 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 CDRT15Q96T59 188 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 MRPS26Q9BYN8 205 aaKnown RBP7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 NDE1Q9NXR1 346 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 ANKMY1Q9P2S6 941 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 SHOC2Q9UQ13 582 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 ACTL7BQ9Y614 415 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 CLUHO75153 1309 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 TSC2P49815 1807 aa7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 TRIP12Q14669 1992 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-219ENST00000514743 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.51□□□□□ -1.21
PDLIM5-219ENST00000514743 A0A1B0GWJ7 208 aa7.51□□□□□ -1.21
PDLIM5-219ENST00000514743 C2orf72A6NCS6 295 aa7.51□□□□□ -1.21
PDLIM5-219ENST00000514743 CFAP99D6REC4 459 aa7.51□□□□□ -1.21
PDLIM5-219ENST00000514743 TM9SF1O15321 606 aa7.51□□□□□ -1.21
PDLIM5-219ENST00000514743 GPR37L1O60883 481 aa7.51□□□□□ -1.21
PDLIM5-219ENST00000514743 ATG13O75143 517 aa7.51□□□□□ -1.21
PDLIM5-219ENST00000514743 CLN5O75503 358 aa7.51□□□□□ -1.21
PDLIM5-219ENST00000514743 SCO1O75880 301 aa7.51□□□□□ -1.21
PDLIM5-219ENST00000514743 ENDOD1O94919 500 aa7.51□□□□□ -1.21
PDLIM5-219ENST00000514743 POLR2BP30876 1174 aaKnown RBP7.51□□□□□ -1.21
PDLIM5-219ENST00000514743 OR3A3P47888 321 aa7.51□□□□□ -1.21
PDLIM5-219ENST00000514743 RAB14P61106 215 aa7.51□□□□□ -1.21
PDLIM5-219ENST00000514743 COPZ1P61923 177 aa7.51□□□□□ -1.21
PDLIM5-219ENST00000514743 DYNLT1P63172 113 aa7.51□□□□□ -1.21
PDLIM5-219ENST00000514743 GALK2Q01415 458 aa7.51□□□□□ -1.21
PDLIM5-219ENST00000514743 STX3Q13277 289 aa7.51□□□□□ -1.21
PDLIM5-219ENST00000514743 ITGADQ13349 1161 aa7.51□□□□□ -1.21
PDLIM5-219ENST00000514743 SNX17Q15036 470 aa7.51□□□□□ -1.21
PDLIM5-219ENST00000514743 TMED2Q15363 201 aa7.51□□□□□ -1.21
PDLIM5-219ENST00000514743 GTF2IRD2BQ6EKJ0 949 aa7.51□□□□□ -1.21
PDLIM5-219ENST00000514743 TLK2Q86UE8 772 aa7.51□□□□□ -1.21
PDLIM5-219ENST00000514743 GTF2IRD2Q86UP8 949 aa7.51□□□□□ -1.21
PDLIM5-219ENST00000514743 TRABD2AQ86V40 505 aa7.51□□□□□ -1.21
PDLIM5-219ENST00000514743 PPHLN1Q8NEY8 458 aaKnown RBP7.51□□□□□ -1.21
PDLIM5-219ENST00000514743 CMASQ8NFW8 434 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 334.7 ms