RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 RABGEF1Q9UJ41 708 aa13.39□□□□□ -0.27
PFDN1-206ENST00000514611 DOLKQ9UPQ8 538 aa13.39□□□□□ -0.27
PFDN1-206ENST00000514611 H3BRJ5 948 aa13.38□□□□□ -0.27
PFDN1-206ENST00000514611 RASGRP1O95267 797 aa13.38□□□□□ -0.27
PFDN1-206ENST00000514611 PRB1P04280 392 aa13.38□□□□□ -0.27
PFDN1-206ENST00000514611 ELFN1P0C7U0 828 aa13.38□□□□□ -0.27
PFDN1-206ENST00000514611 MYBL1P10243 752 aa13.38□□□□□ -0.27
PFDN1-206ENST00000514611 CTSEP14091 401 aa13.38□□□□□ -0.27
PFDN1-206ENST00000514611 AMPD1P23109 780 aa13.38□□□□□ -0.27
PFDN1-206ENST00000514611 HTR1BP28222 390 aa13.38□□□□□ -0.27
PFDN1-206ENST00000514611 PCK1P35558 622 aa13.38□□□□□ -0.27
PFDN1-206ENST00000514611 LSSP48449 732 aa13.38□□□□□ -0.27
PFDN1-206ENST00000514611 RPIAP49247 311 aa13.38□□□□□ -0.27
PFDN1-206ENST00000514611 SRP54P61011 504 aaKnown RBP13.38□□□□□ -0.27
PFDN1-206ENST00000514611 CXADRP78310 365 aa13.38□□□□□ -0.27
PFDN1-206ENST00000514611 MTM1Q13496 603 aa13.38□□□□□ -0.27
PFDN1-206ENST00000514611 LBRQ14739 615 aaKnown RBP13.38□□□□□ -0.27
PFDN1-206ENST00000514611 TMCO4Q5TGY1 634 aa13.38□□□□□ -0.27
PFDN1-206ENST00000514611 HGSNATQ68CP4 663 aa13.38□□□□□ -0.27
PFDN1-206ENST00000514611 ESRP1Q6NXG1 681 aaKnown RBP13.38□□□□□ -0.27
PFDN1-206ENST00000514611 LIPIQ6XZB0 460 aa13.38□□□□□ -0.27
PFDN1-206ENST00000514611 PELI3Q8N2H9 469 aa13.38□□□□□ -0.27
PFDN1-206ENST00000514611 FSTL5Q8N475 847 aaPredicted RBP13.38□□□□□ -0.27
PFDN1-206ENST00000514611 PAF1Q8N7H5 531 aa13.38□□□□□ -0.27
PFDN1-206ENST00000514611 NAT6Q93015 286 aa13.38□□□□□ -0.27
PFDN1-206ENST00000514611 FUBP1Q96AE4 644 aaKnown RBP13.38□□□□□ -0.27
PFDN1-206ENST00000514611 TRIM11Q96F44 468 aa13.38□□□□□ -0.27
PFDN1-206ENST00000514611 WDR92Q96MX6 357 aa13.38□□□□□ -0.27
PFDN1-206ENST00000514611 PSKH2Q96QS6 385 aa13.38□□□□□ -0.27
PFDN1-206ENST00000514611 UBL7Q96S82 380 aaPredicted RBP13.38□□□□□ -0.27
PFDN1-206ENST00000514611 ISCUQ9H1K1 167 aa13.38□□□□□ -0.27
PFDN1-206ENST00000514611 FGF22Q9HCT0 170 aa13.38□□□□□ -0.27
PFDN1-206ENST00000514611 MRPL47Q9HD33 250 aaKnown RBP13.38□□□□□ -0.27
PFDN1-206ENST00000514611 MRPL40Q9NQ50 206 aaKnown RBP13.38□□□□□ -0.27
PFDN1-206ENST00000514611 GULP1Q9UBP9 304 aa13.38□□□□□ -0.27
PFDN1-206ENST00000514611 SEPT3Q9UH03 358 aa13.38□□□□□ -0.27
PFDN1-206ENST00000514611 PADI4Q9UM07 663 aa13.38□□□□□ -0.27
PFDN1-206ENST00000514611 TMEM202A6NGA9 273 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 TMEM110-MUSTN1A8MSY1 372 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 TCEA3O75764 348 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 PEX11BO96011 259 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 ALPIP09923 528 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 HCAR3P49019 387 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 ZNF135P52742 658 aaPredicted RBP13.37□□□□□ -0.27
PFDN1-206ENST00000514611 MAXP61244 160 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 AP1S1P61966 158 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 NSUN2Q08J23 767 aaKnown RBP eCLIP13.37□□□□□ -0.27
PFDN1-206ENST00000514611 SPIDRQ14159 915 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 ZNF235Q14590 738 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 ELOCQ15369 112 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 FOXR1Q6PIV2 292 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 TMCO3Q6UWJ1 677 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 DPPA4Q7L190 304 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 POLNQ7Z5Q5 900 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 LUZP1Q86V48 1076 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 SFTPA2Q8IWL1 248 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 LSMEM2Q8N112 164 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 PGBD5Q8N414 524 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 LZTR1Q8N653 840 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 TPCN2Q8NHX9 752 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 PDCD6IPQ8WUM4 868 aaKnown RBP13.37□□□□□ -0.27
PFDN1-206ENST00000514611 OR1E3Q8WZA6 343 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 CCDC74AQ96AQ1 378 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 PRR11Q96HE9 360 aaPredicted RBP13.37□□□□□ -0.27
PFDN1-206ENST00000514611 CSPG4P5Q96PW8 444 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.37□□□□□ -0.27
PFDN1-206ENST00000514611 THAP2Q9H0W7 228 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 B4GALT6Q9UBX8 382 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 PCDHGC4Q9Y5F7 938 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 LRRK1Q38SD2 2015 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 LRP4O75096 1905 aa13.37□□□□□ -0.27
PFDN1-206ENST00000514611 KNTC1P50748 2209 aa13.36□□□□□ -0.27
PFDN1-206ENST00000514611 IGSF10Q6WRI0 2623 aa13.36□□□□□ -0.27
PFDN1-206ENST00000514611 SYCE3A1L190 88 aa13.36□□□□□ -0.27
PFDN1-206ENST00000514611 CFAP69A5D8W1 941 aa13.36□□□□□ -0.27
PFDN1-206ENST00000514611 EIF4E1BA6NMX2 242 aaKnown RBP13.36□□□□□ -0.27
PFDN1-206ENST00000514611 CACNB4O00305 520 aaPredicted RBP13.36□□□□□ -0.27
PFDN1-206ENST00000514611 NTN3O00634 580 aaPredicted RBP13.36□□□□□ -0.27
PFDN1-206ENST00000514611 MAFKO60675 156 aa13.36□□□□□ -0.27
PFDN1-206ENST00000514611 RARAP10276 462 aa13.36□□□□□ -0.27
PFDN1-206ENST00000514611 CR2P20023 1033 aa13.36□□□□□ -0.27
PFDN1-206ENST00000514611 PBX1P40424 430 aa13.36□□□□□ -0.27
PFDN1-206ENST00000514611 ARL4AP40617 200 aa13.36□□□□□ -0.27
PFDN1-206ENST00000514611 KIAA1024LP59773 190 aa13.36□□□□□ -0.27
PFDN1-206ENST00000514611 ERVPABLB-1P60509 514 aa13.36□□□□□ -0.27
PFDN1-206ENST00000514611 SLC25A11Q02978 314 aaKnown RBP13.36□□□□□ -0.27
PFDN1-206ENST00000514611 TRAF2Q12933 501 aa13.36□□□□□ -0.27
PFDN1-206ENST00000514611 ACOX1Q15067 660 aa13.36□□□□□ -0.27
PFDN1-206ENST00000514611 CNGA3Q16281 694 aa13.36□□□□□ -0.27
PFDN1-206ENST00000514611 FIGNQ5HY92 759 aa13.36□□□□□ -0.27
PFDN1-206ENST00000514611 B3GNT8Q7Z7M8 397 aa13.36□□□□□ -0.27
PFDN1-206ENST00000514611 GKN2Q86XP6 184 aa13.36□□□□□ -0.27
PFDN1-206ENST00000514611 SDR16C5Q8N3Y7 309 aa13.36□□□□□ -0.27
PFDN1-206ENST00000514611 ATPAF2Q8N5M1 289 aa13.36□□□□□ -0.27
PFDN1-206ENST00000514611 OR56A4Q8NGH8 313 aa13.36□□□□□ -0.27
PFDN1-206ENST00000514611 KCNE4Q8WWG9 221 aa13.36□□□□□ -0.27
PFDN1-206ENST00000514611 ZNF599Q96NL3 588 aa13.36□□□□□ -0.27
PFDN1-206ENST00000514611 RBM15Q96T37 977 aaKnown RBP eCLIP13.36□□□□□ -0.271e-6■■■■□ 21.5
PFDN1-206ENST00000514611 MGME1Q9BQP7 344 aa13.36□□□□□ -0.27
PFDN1-206ENST00000514611 LGR4Q9BXB1 951 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms