RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 TNFP01375 233 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 RHOCP08134 193 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 TIMP2P16035 220 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 RAB15P59190 212 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 MC2RQ01718 297 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 INPP5AQ14642 412 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 TAF5Q15542 800 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 CLPPQ16740 277 aaPredicted RBP9.19□□□□□ -0.94
NUP54-211ENST00000512151 ZXDCQ2QGD7 858 aaPredicted RBP9.19□□□□□ -0.94
NUP54-211ENST00000512151 C5orf22Q49AR2 442 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 ZNF805Q5CZA5 627 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 ZNF658Q5TYW1 1059 aaPredicted RBP9.19□□□□□ -0.94
NUP54-211ENST00000512151 CPZQ66K79 652 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 IRF2BP1Q8IU81 584 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 APLFQ8IW19 511 aaPredicted RBP9.19□□□□□ -0.94
NUP54-211ENST00000512151 MMP21Q8N119 569 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 CCDC150Q8NCX0 1101 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 PATE1Q8WXA2 126 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 RAB7BQ96AH8 199 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 CCDC34Q96HJ3 373 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 FAXDC2Q96IV6 333 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 HSFY1Q96LI6 401 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 WDR92Q96MX6 357 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 MFRPQ9BY79 579 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 TM6SF2Q9BZW4 377 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 EXOC1Q9NV70 894 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 RAB20Q9NX57 234 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 COX16Q9P0S2 106 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 HOOK1Q9UJC3 728 aaKnown RBP9.19□□□□□ -0.94
NUP54-211ENST00000512151 CROTQ9UKG9 612 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 MAPK8IP1Q9UQF2 711 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 FRMD4BQ9Y2L6 1034 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 PKDREJQ9NTG1 2253 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 IGHV1OR21-1A0A087WYE8 117 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 GOLGA6L3A6NEY3 463 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 PPP1R3GB7ZBB8 358 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 I6L893 689 aaPredicted RBP9.18□□□□□ -0.94
NUP54-211ENST00000512151 RNF225M0QZC1 329 aaPredicted RBP9.18□□□□□ -0.94
NUP54-211ENST00000512151 PDXKO00764 312 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 MAPK13O15264 365 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 ADCY5O95622 1261 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 FGF1P05230 155 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 UGT2B4P06133 528 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 ZNF28P17035 718 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 BRD2P25440 801 aaKnown RBP9.18□□□□□ -0.94
NUP54-211ENST00000512151 DLSTP36957 453 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 PRCPP42785 496 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 LEPRP48357 1165 aaKnown RBP9.18□□□□□ -0.94
NUP54-211ENST00000512151 RPL34P49207 117 aaKnown RBP9.18□□□□□ -0.94
NUP54-211ENST00000512151 SERPINH1P50454 418 aaKnown RBP9.18□□□□□ -0.94
NUP54-211ENST00000512151 PGDP52209 483 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 CDH4P55283 916 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 ARF5P84085 180 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 CHAF1BQ13112 559 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 SQSTM1Q13501 440 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 SEMA5AQ13591 1074 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 CUL2Q13617 745 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 KRT39Q6A163 491 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 ANKRD40Q6AI12 368 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 JMJD6Q6NYC1 403 aaPredicted RBP9.18□□□□□ -0.94
NUP54-211ENST00000512151 BEND5Q7L4P6 421 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 NRROSQ86YC3 692 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 ZNF683Q8IZ20 524 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 PCDH20Q8N6Y1 951 aaKnown RBP9.18□□□□□ -0.94
NUP54-211ENST00000512151 PLA2G15Q8NCC3 412 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 KLHL32Q96NJ5 620 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 TEFMQ96QE5 360 aaKnown RBP9.18□□□□□ -0.94
NUP54-211ENST00000512151 SLC29A3Q9BZD2 475 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 MLXIPLQ9NP71 852 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 ANLNQ9NQW6 1124 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 MAP10Q9P2G4 905 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 PDP2Q9P2J9 529 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 HECAQ9UBI9 543 aaPredicted RBP9.18□□□□□ -0.94
NUP54-211ENST00000512151 SLC12A6Q9UHW9 1150 aa9.18□□□□□ -0.94
NUP54-211ENST00000512151 SYCE3A1L190 88 aa9.17□□□□□ -0.94
NUP54-211ENST00000512151 A8MU76 341 aa9.17□□□□□ -0.94
NUP54-211ENST00000512151 PPM1DO15297 605 aa9.17□□□□□ -0.94
NUP54-211ENST00000512151 PAGE1O75459 146 aa9.17□□□□□ -0.94
NUP54-211ENST00000512151 ECEL1O95672 775 aa9.17□□□□□ -0.94
NUP54-211ENST00000512151 HTR1BP28222 390 aa9.17□□□□□ -0.94
NUP54-211ENST00000512151 MCCD1P59942 119 aaPredicted RBP9.17□□□□□ -0.94
NUP54-211ENST00000512151 LRRC14Q15048 493 aa9.17□□□□□ -0.94
NUP54-211ENST00000512151 CNGA2Q16280 664 aa9.17□□□□□ -0.94
NUP54-211ENST00000512151 DPCR1Q3MIW9 517 aa9.17□□□□□ -0.94
NUP54-211ENST00000512151 ZRANB3Q5FWF4 1079 aa9.17□□□□□ -0.94
NUP54-211ENST00000512151 INTS8Q75QN2 995 aaKnown RBP9.17□□□□□ -0.94
NUP54-211ENST00000512151 TFAP2DQ7Z6R9 452 aa9.17□□□□□ -0.94
NUP54-211ENST00000512151 FBXL13Q8NEE6 735 aa9.17□□□□□ -0.94
NUP54-211ENST00000512151 CXorf40AQ8TE69 158 aa9.17□□□□□ -0.94
NUP54-211ENST00000512151 MED15Q96RN5 788 aa9.17□□□□□ -0.94
NUP54-211ENST00000512151 CEP44Q9C0F1 390 aa9.17□□□□□ -0.94
NUP54-211ENST00000512151 TWSG1Q9GZX9 223 aa9.17□□□□□ -0.94
NUP54-211ENST00000512151 TRIT1Q9H3H1 467 aaKnown RBP9.17□□□□□ -0.94
NUP54-211ENST00000512151 FAM204AQ9H8W3 233 aa9.17□□□□□ -0.94
NUP54-211ENST00000512151 RMND1Q9NWS8 449 aa9.17□□□□□ -0.94
NUP54-211ENST00000512151 MPP6Q9NZW5 540 aa9.17□□□□□ -0.94
NUP54-211ENST00000512151 PCDHB3Q9Y5E6 796 aa9.17□□□□□ -0.94
NUP54-211ENST00000512151 KATNA1O75449 491 aa9.16□□□□□ -0.94
NUP54-211ENST00000512151 MAP3K6O95382 1288 aa9.16□□□□□ -0.94
NUP54-211ENST00000512151 PCCBP05166 539 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms