RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 PELI3Q8N2H9 469 aa16.57■□□□□ 0.24
DDX41-213ENST00000512027 CCNYQ8ND76 341 aa16.57■□□□□ 0.24
DDX41-213ENST00000512027 ZNF548Q8NEK5 533 aaPredicted RBP16.57■□□□□ 0.24
DDX41-213ENST00000512027 FAM174AQ8TBP5 190 aa16.57■□□□□ 0.24
DDX41-213ENST00000512027 MAML1Q92585 1016 aa16.57■□□□□ 0.24
DDX41-213ENST00000512027 LGMNQ99538 433 aa16.57■□□□□ 0.24
DDX41-213ENST00000512027 C1QTNF7Q9BXJ2 289 aa16.57■□□□□ 0.24
DDX41-213ENST00000512027 CEP41Q9BYV8 373 aa16.57■□□□□ 0.24
DDX41-213ENST00000512027 RBM22Q9NW64 420 aaKnown RBP eCLIP16.57■□□□□ 0.24
DDX41-213ENST00000512027 SALL4Q9UJQ4 1053 aa16.57■□□□□ 0.24
DDX41-213ENST00000512027 MSRB2Q9Y3D2 182 aa16.57■□□□□ 0.24
DDX41-213ENST00000512027 OR1A2Q9Y585 309 aa16.57■□□□□ 0.24
DDX41-213ENST00000512027 KCNK1O00180 336 aa16.56■□□□□ 0.24
DDX41-213ENST00000512027 ZZEF1O43149 2961 aa16.56■□□□□ 0.24
DDX41-213ENST00000512027 SOCS5O75159 536 aa16.56■□□□□ 0.24
DDX41-213ENST00000512027 RECQL5O94762 991 aaPredicted RBP16.56■□□□□ 0.24
DDX41-213ENST00000512027 CSF2P04141 144 aa16.56■□□□□ 0.24
DDX41-213ENST00000512027 PDHA1P08559 390 aa16.56■□□□□ 0.24
DDX41-213ENST00000512027 ALPIP09923 528 aa16.56■□□□□ 0.24
DDX41-213ENST00000512027 JUNDP17535 347 aa16.56■□□□□ 0.24
DDX41-213ENST00000512027 CTPS1P17812 591 aa16.56■□□□□ 0.24
DDX41-213ENST00000512027 CCNCP24863 283 aa16.56■□□□□ 0.24
DDX41-213ENST00000512027 CYLC1P35663 651 aaPredicted RBP16.56■□□□□ 0.24
DDX41-213ENST00000512027 C1orf61Q13536 156 aa16.56■□□□□ 0.24
DDX41-213ENST00000512027 INPP5AQ14642 412 aa16.56■□□□□ 0.24
DDX41-213ENST00000512027 CNGA3Q16281 694 aa16.56■□□□□ 0.24
DDX41-213ENST00000512027 PROX2Q3B8N5 592 aa16.56■□□□□ 0.24
DDX41-213ENST00000512027 DENND2CQ68D51 928 aa16.56■□□□□ 0.24
DDX41-213ENST00000512027 KCTD16Q68DU8 428 aa16.56■□□□□ 0.24
DDX41-213ENST00000512027 RAD9BQ6WBX8 426 aa16.56■□□□□ 0.24
DDX41-213ENST00000512027 RFX6Q8HWS3 928 aa16.56■□□□□ 0.24
DDX41-213ENST00000512027 LRRC49Q8IUZ0 686 aa16.56■□□□□ 0.24
DDX41-213ENST00000512027 RHOT1Q8IXI2 618 aa16.56■□□□□ 0.24
DDX41-213ENST00000512027 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.56■□□□□ 0.24
DDX41-213ENST00000512027 TSGA13Q96PP4 275 aa16.56■□□□□ 0.24
DDX41-213ENST00000512027 PANX2Q96RD6 677 aa16.56■□□□□ 0.24
DDX41-213ENST00000512027 POLR1EQ9GZS1 481 aaKnown RBP16.56■□□□□ 0.24
DDX41-213ENST00000512027 REXO2Q9Y3B8 237 aaKnown RBP16.56■□□□□ 0.24
DDX41-213ENST00000512027 RAI2Q9Y5P3 530 aa16.56■□□□□ 0.24
DDX41-213ENST00000512027 ALG6Q9Y672 507 aa16.56■□□□□ 0.24
DDX41-213ENST00000512027 GOLGA4Q13439 2230 aaKnown RBP16.55■□□□□ 0.24
DDX41-213ENST00000512027 MYLKQ15746 1914 aa16.55■□□□□ 0.24
DDX41-213ENST00000512027 NPIPB15A6NHN6 443 aaPredicted RBP16.55■□□□□ 0.24
DDX41-213ENST00000512027 APOL1O14791 398 aa16.55■□□□□ 0.24
DDX41-213ENST00000512027 NDUFA10O95299 355 aa16.55■□□□□ 0.24
DDX41-213ENST00000512027 PGLSO95336 258 aa16.55■□□□□ 0.24
DDX41-213ENST00000512027 CELA2BP08218 269 aaPredicted RBP16.55■□□□□ 0.24
DDX41-213ENST00000512027 KRT10P13645 584 aa16.55■□□□□ 0.24
DDX41-213ENST00000512027 CCNB1P14635 433 aa16.55■□□□□ 0.24
DDX41-213ENST00000512027 FECHP22830 423 aa16.55■□□□□ 0.24
DDX41-213ENST00000512027 LHCGRP22888 699 aa16.55■□□□□ 0.24
DDX41-213ENST00000512027 SLC1A1P43005 524 aa16.55■□□□□ 0.24
DDX41-213ENST00000512027 HNRNPKP61978 463 aaKnown RBP eCLIP16.55■□□□□ 0.24
DDX41-213ENST00000512027 POLR2LP62875 67 aaKnown RBP16.55■□□□□ 0.24
DDX41-213ENST00000512027 NIPAL4Q0D2K0 466 aa16.55■□□□□ 0.24
DDX41-213ENST00000512027 ZBTB17Q13105 803 aa16.55■□□□□ 0.24
DDX41-213ENST00000512027 ACOX1Q15067 660 aa16.55■□□□□ 0.24
DDX41-213ENST00000512027 SPA17Q15506 151 aa16.55■□□□□ 0.24
DDX41-213ENST00000512027 ST3GAL2Q16842 350 aa16.55■□□□□ 0.24
DDX41-213ENST00000512027 LRRC38Q5VT99 294 aa16.55■□□□□ 0.24
DDX41-213ENST00000512027 SLC9A4Q6AI14 798 aa16.55■□□□□ 0.24
DDX41-213ENST00000512027 TIGD7Q6NT04 549 aaPredicted RBP16.55■□□□□ 0.24
DDX41-213ENST00000512027 MACC1Q6ZN28 852 aa16.55■□□□□ 0.24
DDX41-213ENST00000512027 TSPAN33Q86UF1 283 aa16.55■□□□□ 0.24
DDX41-213ENST00000512027 CCDC13Q8IYE1 715 aa16.55■□□□□ 0.24
DDX41-213ENST00000512027 CCDC170Q8IYT3 715 aa16.55■□□□□ 0.24
DDX41-213ENST00000512027 PHACTR4Q8IZ21 702 aa16.55■□□□□ 0.24
DDX41-213ENST00000512027 ACRBPQ8NEB7 543 aa16.55■□□□□ 0.24
DDX41-213ENST00000512027 OR4C6Q8NH72 309 aa16.55■□□□□ 0.24
DDX41-213ENST00000512027 LMX1AQ8TE12 382 aa16.55■□□□□ 0.24
DDX41-213ENST00000512027 FUBP1Q96AE4 644 aaKnown RBP16.55■□□□□ 0.24
DDX41-213ENST00000512027 HDAC11Q96DB2 347 aa16.55■□□□□ 0.24
DDX41-213ENST00000512027 IFT43Q96FT9 208 aa16.55■□□□□ 0.24
DDX41-213ENST00000512027 APOBEC3BQ9UH17 382 aaKnown RBP16.55■□□□□ 0.24
DDX41-213ENST00000512027 EPN1Q9Y6I3 576 aaPredicted RBP16.55■□□□□ 0.24
DDX41-213ENST00000512027 FREM2Q5SZK8 3169 aa16.55■□□□□ 0.24
DDX41-213ENST00000512027 FAM221BA6H8Z2 402 aa16.54■□□□□ 0.24
DDX41-213ENST00000512027 K7ESM1 405 aa16.54■□□□□ 0.24
DDX41-213ENST00000512027 GCATO75600 419 aa16.54■□□□□ 0.24
DDX41-213ENST00000512027 RFPL3O75679 317 aa16.54■□□□□ 0.24
DDX41-213ENST00000512027 JCHAINP01591 159 aa16.54■□□□□ 0.24
DDX41-213ENST00000512027 MX2P20592 715 aa16.54■□□□□ 0.24
DDX41-213ENST00000512027 VIPR1P32241 457 aa16.54■□□□□ 0.24
DDX41-213ENST00000512027 HADHBP55084 474 aaKnown RBP16.54■□□□□ 0.24
DDX41-213ENST00000512027 YPEL5P62699 121 aa16.54■□□□□ 0.24
DDX41-213ENST00000512027 ADCY2Q08462 1091 aa16.54■□□□□ 0.24
DDX41-213ENST00000512027 AGERQ15109 404 aa16.54■□□□□ 0.24
DDX41-213ENST00000512027 DEFB133Q30KQ1 61 aa16.54■□□□□ 0.24
DDX41-213ENST00000512027 ARMC12Q5T9G4 340 aa16.54■□□□□ 0.24
DDX41-213ENST00000512027 KAZNQ674X7 775 aa16.54■□□□□ 0.24
DDX41-213ENST00000512027 TMPRSS7Q7RTY8 843 aa16.54■□□□□ 0.24
DDX41-213ENST00000512027 SPC24Q8NBT2 197 aa16.54■□□□□ 0.24
DDX41-213ENST00000512027 ARRDC2Q8TBH0 407 aa16.54■□□□□ 0.24
DDX41-213ENST00000512027 PIH1D2Q8WWB5 315 aa16.54■□□□□ 0.24
DDX41-213ENST00000512027 TSACCQ96A04 125 aaPredicted RBP16.54■□□□□ 0.24
DDX41-213ENST00000512027 ZNF830Q96NB3 372 aaPredicted RBP16.54■□□□□ 0.24
DDX41-213ENST00000512027 APOOQ9BUR5 198 aa16.54■□□□□ 0.24
DDX41-213ENST00000512027 LRRC61Q9BV99 259 aa16.54■□□□□ 0.24
DDX41-213ENST00000512027 DDX56Q9NY93 547 aaKnown RBP16.54■□□□□ 0.24
DDX41-213ENST00000512027 SAE1Q9UBE0 346 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms