RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 CROCCP3Q8IVE0 287 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 POU5F2Q8N7G0 328 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 ANKRD52Q8NB46 1076 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 ZNF395Q9H8N7 513 aaPredicted RBP12.95□□□□□ -0.34
HMGB2-205ENST00000511316 LRRC4Q9HBW1 653 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 CRTAC1Q9NQ79 661 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 OXSMQ9NWU1 459 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 TMEM216Q9P0N5 145 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 HSFX1Q9UBD0 423 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 TLK1Q9UKI8 766 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 STAP1Q9ULZ2 295 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 CDYLQ9Y232 598 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 INSL5Q9Y5Q6 135 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 RPS6KL1Q9Y6S9 549 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 PAPSS1O43252 624 aaPredicted RBP12.95□□□□□ -0.34
HMGB2-205ENST00000511316 PDE5AO76074 875 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 MGAT1P26572 445 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 PMLP29590 882 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 LHX1P48742 406 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 NUDT2P50583 147 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 TUBA4AP68366 448 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 ZNF33AQ06730 810 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 ART3Q13508 389 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 ANO4Q32M45 955 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 PIGGQ5H8A4 983 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 PPM1LQ5SGD2 360 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 PMF1Q6P1K2 205 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 C16orf46Q6P387 395 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 CCDC149Q6ZUS6 474 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 DENND4AQ7Z401 1863 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 LINC00523Q86TU6 105 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 TICAM1Q8IUC6 712 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 RNF217Q8TC41 542 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 CCDC126Q96EE4 140 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 MYADMQ96S97 322 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 OSBPL11Q9BXB4 747 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 SNX25Q9H3E2 840 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 TMEM30AQ9NV96 361 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 USP3Q9Y6I4 520 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 A0A096LPK6 155 aa12.94□□□□□ -0.34
HMGB2-205ENST00000511316 TNFRSF10AO00220 468 aa12.94□□□□□ -0.34
HMGB2-205ENST00000511316 DNAJA2O60884 412 aa12.94□□□□□ -0.34
HMGB2-205ENST00000511316 FBXO21O94952 628 aa12.94□□□□□ -0.34
HMGB2-205ENST00000511316 AP2A1O95782 977 aa12.94□□□□□ -0.34
HMGB2-205ENST00000511316 PDGFRBP09619 1106 aa12.94□□□□□ -0.34
HMGB2-205ENST00000511316 CPB1P15086 417 aa12.94□□□□□ -0.34
HMGB2-205ENST00000511316 MATKP42679 507 aa12.94□□□□□ -0.34
HMGB2-205ENST00000511316 HCAR3P49019 387 aa12.94□□□□□ -0.34
HMGB2-205ENST00000511316 EPHA5P54756 1037 aa12.94□□□□□ -0.34
HMGB2-205ENST00000511316 SESN2P58004 480 aaPredicted RBP12.94□□□□□ -0.34
HMGB2-205ENST00000511316 TWF1Q12792 350 aa12.94□□□□□ -0.34
HMGB2-205ENST00000511316 TRAP1Q12931 704 aaKnown RBP12.94□□□□□ -0.34
HMGB2-205ENST00000511316 STX5Q13190 355 aa12.94□□□□□ -0.34
HMGB2-205ENST00000511316 CA9Q16790 459 aa12.94□□□□□ -0.34
HMGB2-205ENST00000511316 SLC25A52Q3SY17 297 aa12.94□□□□□ -0.34
HMGB2-205ENST00000511316 TTC30AQ86WT1 665 aa12.94□□□□□ -0.34
HMGB2-205ENST00000511316 METTL23Q86XA0 190 aa12.94□□□□□ -0.34
HMGB2-205ENST00000511316 RNF135Q8IUD6 432 aa12.94□□□□□ -0.34
HMGB2-205ENST00000511316 DSELQ8IZU8 1212 aa12.94□□□□□ -0.34
HMGB2-205ENST00000511316 THEM5Q8N1Q8 247 aa12.94□□□□□ -0.34
HMGB2-205ENST00000511316 DCLK2Q8N568 766 aa12.94□□□□□ -0.34
HMGB2-205ENST00000511316 ITFG1Q8TB96 612 aa12.94□□□□□ -0.34
HMGB2-205ENST00000511316 KCTD15Q96SI1 283 aaPredicted RBP12.94□□□□□ -0.34
HMGB2-205ENST00000511316 TRIM56Q9BRZ2 755 aaKnown RBP12.94□□□□□ -0.34
HMGB2-205ENST00000511316 DPEP3Q9H4B8 488 aa12.94□□□□□ -0.34
HMGB2-205ENST00000511316 GPATCH2LQ9NWQ4 482 aa12.94□□□□□ -0.34
HMGB2-205ENST00000511316 SUCOQ9UBS9 1254 aaKnown RBP12.94□□□□□ -0.34
HMGB2-205ENST00000511316 FZD10Q9ULW2 581 aa12.94□□□□□ -0.34
HMGB2-205ENST00000511316 AP4B1Q9Y6B7 739 aa12.94□□□□□ -0.34
HMGB2-205ENST00000511316 NPHS1O60500 1241 aa12.93□□□□□ -0.34
HMGB2-205ENST00000511316 DAB1O75553 588 aa12.93□□□□□ -0.34
HMGB2-205ENST00000511316 SMIM18P0DKX4 95 aa12.93□□□□□ -0.34
HMGB2-205ENST00000511316 ATF6P18850 670 aa12.93□□□□□ -0.34
HMGB2-205ENST00000511316 GNL1P36915 607 aaPredicted RBP12.93□□□□□ -0.34
HMGB2-205ENST00000511316 MPP3Q13368 585 aa12.93□□□□□ -0.34
HMGB2-205ENST00000511316 PRPSAP1Q14558 356 aa12.93□□□□□ -0.34
HMGB2-205ENST00000511316 PRSS36Q5K4E3 855 aa12.93□□□□□ -0.34
HMGB2-205ENST00000511316 TCHHL1Q5QJ38 904 aaPredicted RBP12.93□□□□□ -0.34
HMGB2-205ENST00000511316 SYCP2LQ5T4T6 812 aa12.93□□□□□ -0.34
HMGB2-205ENST00000511316 RNF111Q6ZNA4 994 aa12.93□□□□□ -0.34
HMGB2-205ENST00000511316 PAQR9Q6ZVX9 377 aa12.93□□□□□ -0.34
HMGB2-205ENST00000511316 STRA8Q7Z7C7 330 aa12.93□□□□□ -0.34
HMGB2-205ENST00000511316 CCDC117Q8IWD4 279 aaPredicted RBP12.93□□□□□ -0.34
HMGB2-205ENST00000511316 HS6ST3Q8IZP7 471 aa12.93□□□□□ -0.34
HMGB2-205ENST00000511316 CRYBG2Q8N1P7 616 aa12.93□□□□□ -0.34
HMGB2-205ENST00000511316 ITFG2Q969R8 447 aa12.93□□□□□ -0.34
HMGB2-205ENST00000511316 ASB9Q96DX5 294 aa12.93□□□□□ -0.34
HMGB2-205ENST00000511316 TCEAL4Q96EI5 215 aa12.93□□□□□ -0.34
HMGB2-205ENST00000511316 DUS3LQ96G46 650 aaKnown RBP12.93□□□□□ -0.34
HMGB2-205ENST00000511316 P2RY11Q96G91 374 aa12.93□□□□□ -0.34
HMGB2-205ENST00000511316 LENG8Q96PV6 779 aaPredicted RBP12.93□□□□□ -0.34
HMGB2-205ENST00000511316 EPHX3Q9H6B9 360 aa12.93□□□□□ -0.34
HMGB2-205ENST00000511316 RRN3Q9NYV6 651 aa12.93□□□□□ -0.34
HMGB2-205ENST00000511316 RIMS3Q9UJD0 308 aa12.93□□□□□ -0.34
HMGB2-205ENST00000511316 VANGL2Q9ULK5 521 aa12.93□□□□□ -0.34
HMGB2-205ENST00000511316 YIPF1Q9Y548 306 aa12.93□□□□□ -0.34
HMGB2-205ENST00000511316 LOC100653049A0A140TA62 436 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 PRSS51A0A1B0GVH4 220 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 CAPN8A6NHC0 703 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 G3V2L1 256 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms