RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 ABLIM1O14639 778 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 PQBP1O60828 265 aaKnown RBP10.63□□□□□ -0.71
NEK1-206ENST00000510533 TGDSO95455 350 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 ZNF24P17028 368 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 LPOP22079 712 aaPredicted RBP10.63□□□□□ -0.71
NEK1-206ENST00000510533 MRPS5P82675 430 aaKnown RBP10.63□□□□□ -0.71
NEK1-206ENST00000510533 PCBP1Q15365 356 aaKnown RBP eCLIP10.63□□□□□ -0.71
NEK1-206ENST00000510533 SLC25A24Q6NUK1 477 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 CUZD1Q86UP6 607 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 CACUL1Q86Y37 369 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 RIOX2Q8IUF8 465 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 FAM13CQ8NE31 585 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 OR4L1Q8NH43 312 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 QKIQ96PU8 341 aaKnown RBP eCLIP10.63□□□□□ -0.714e-6■■□□□ 14.1
NEK1-206ENST00000510533 PRDM8Q9NQV8 689 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 OGDHLQ9ULD0 1010 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 TRAF6Q9Y4K3 522 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 HES2Q9Y543 173 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 PIK3C2BO00750 1634 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 PSMD11O00231 422 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 TGFB1I1O43294 461 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 MGRN1O60291 552 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 FTH1P02794 183 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 CRHR1P34998 444 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 CDK18Q07002 472 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 MTX3Q5HYI7 312 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 FNBP1LQ5T0N5 605 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 COLGALT2Q8IYK4 626 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 TBC1D21Q8IYX1 336 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 FAM47BQ8NA70 645 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 GPR156Q8NFN8 814 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 GIPC3Q8TF64 312 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 HDAC10Q969S8 669 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 LINGO1Q96FE5 620 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 MFSD14AQ96MC6 490 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 GORASP1Q9BQQ3 440 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 WDR12Q9GZL7 423 aaKnown RBP10.63□□□□□ -0.71
NEK1-206ENST00000510533 CAB39LQ9H9S4 337 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 SSR3Q9UNL2 185 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 PLLPQ9Y342 182 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 PXDNQ92626 1479 aa10.63□□□□□ -0.71
NEK1-206ENST00000510533 G3V2T6 193 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 DDX3YO15523 660 aaKnown RBP10.62□□□□□ -0.71
NEK1-206ENST00000510533 NRP2O60462 931 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 SPATA31C1P0DKV0 1188 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 MAXP61244 160 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 TRIM32Q13049 653 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 LPCAT4Q643R3 524 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 MFSD5Q6N075 450 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 NEK5Q6P3R8 708 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 TRIM40Q6P9F5 258 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 R3HCC1LQ7Z5L2 792 aaKnown RBP10.62□□□□□ -0.71
NEK1-206ENST00000510533 LRRC17Q8N6Y2 441 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 CXorf40AQ8TE69 158 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 P2RY11Q96G91 374 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 HSD17B14Q9BPX1 270 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 FNDC11Q9BVV2 318 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 RHOJQ9H4E5 214 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 PCDH18Q9HCL0 1135 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 ERVK-5Q9HDB9 667 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 TMA7Q9Y2S6 64 aaKnown RBP10.62□□□□□ -0.71
NEK1-206ENST00000510533 HBS1LQ9Y450 684 aaKnown RBP10.62□□□□□ -0.71
NEK1-206ENST00000510533 CCDC189A1A4V9 331 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 AMHP03971 560 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 FGF1P05230 155 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 HOXB6P17509 224 aaKnown RBP10.62□□□□□ -0.71
NEK1-206ENST00000510533 NELFEP18615 380 aaKnown RBP10.62□□□□□ -0.71
NEK1-206ENST00000510533 CDH3P22223 829 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 MYL9P24844 172 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 RTP1P59025 263 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 CPSF6Q16630 551 aaKnown RBP eCLIP10.62□□□□□ -0.71
NEK1-206ENST00000510533 ANXA8L1Q5VT79 327 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 LIN54Q6MZP7 749 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 CLNKQ7Z7G1 428 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 SLC44A1Q8WWI5 657 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 BORCS5Q969J3 196 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 TM6SF2Q9BZW4 377 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 RPRD1BQ9NQG5 326 aaKnown RBP10.62□□□□□ -0.71
NEK1-206ENST00000510533 ZNF222Q9UK12 451 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 ING4Q9UNL4 249 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 PTCH2Q9Y6C5 1203 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 ROBO3Q96MS0 1386 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 SUV39H1O43463 412 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 PIRTP0C851 137 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 BMP7P18075 431 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 PPIBP23284 216 aaKnown RBP10.62□□□□□ -0.71
NEK1-206ENST00000510533 AIF1P55008 147 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 BEX3Q00994 111 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 KLF10Q13118 480 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 TIGD2Q4W5G0 525 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 CXXC5Q7LFL8 322 aaKnown RBP10.62□□□□□ -0.71
NEK1-206ENST00000510533 DENND1CQ8IV53 801 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 COPS5Q92905 334 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 TRIM39Q9HCM9 518 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 TMEM138Q9NPI0 162 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 MRPL17Q9NRX2 175 aaKnown RBP10.62□□□□□ -0.71
NEK1-206ENST00000510533 ZNHIT2Q9UHR6 403 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 SH3GLB1Q9Y371 365 aa10.62□□□□□ -0.71
NEK1-206ENST00000510533 POLR3HQ9Y535 204 aaPredicted RBP10.62□□□□□ -0.71
NEK1-206ENST00000510533 PCDHGA4Q9Y5G9 962 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms