RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 PRR5-ARHGAP8B1AHC4 643 aa14.95□□□□□ -0.02
PHF3-209ENST00000509330 SMAD6O43541 496 aaKnown RBP14.95□□□□□ -0.02
PHF3-209ENST00000509330 TRIM13O60858 407 aa14.95□□□□□ -0.02
PHF3-209ENST00000509330 TSPAN8P19075 237 aa14.95□□□□□ -0.02
PHF3-209ENST00000509330 ARHGAP8P85298 464 aa14.95□□□□□ -0.02
PHF3-209ENST00000509330 C5orf22Q49AR2 442 aa14.95□□□□□ -0.02
PHF3-209ENST00000509330 CFAP157Q5JU67 520 aa14.95□□□□□ -0.02
PHF3-209ENST00000509330 GPR158Q5T848 1215 aa14.95□□□□□ -0.02
PHF3-209ENST00000509330 HECTD2Q5U5R9 776 aa14.95□□□□□ -0.02
PHF3-209ENST00000509330 TMEM151AQ8N4L1 468 aa14.95□□□□□ -0.02
PHF3-209ENST00000509330 POU5F2Q8N7G0 328 aa14.95□□□□□ -0.02
PHF3-209ENST00000509330 MYLIPQ8WY64 445 aa14.95□□□□□ -0.02
PHF3-209ENST00000509330 FEM1CQ96JP0 617 aa14.95□□□□□ -0.02
PHF3-209ENST00000509330 MEI4A8MW99 385 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 E9PBE3 544 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 KLHL41O60662 606 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 FGF1P05230 155 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 ESRRAP11474 423 aaPredicted RBP14.94□□□□□ -0.02
PHF3-209ENST00000509330 NCF2P19878 526 aaPredicted RBP14.94□□□□□ -0.02
PHF3-209ENST00000509330 HLA-DPA1P20036 260 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 PMLP29590 882 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 CCR2P41597 374 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 RHOAP61586 193 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 E2F5Q15329 346 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 FBXO48Q5FWF7 155 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 TADA1Q96BN2 335 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 TCEAL4Q96EI5 215 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 MIPEPQ99797 713 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 OSBPL1AQ9BXW6 950 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 TNKS2Q9H2K2 1166 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 VPS51Q9UID3 782 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 SH3BP1Q9Y3L3 701 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 PCDHB9Q9Y5E1 797 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 CFAP73A6NFT4 308 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 TMEM233B4DJY2 109 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 DLX3O60479 287 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 NDST3O95803 873 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 GLP2RO95838 553 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 KCNA5P22460 613 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 TRAF2Q12933 501 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 PEX6Q13608 980 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 RINLQ6ZS11 566 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 KREMEN2Q8NCW0 462 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 MAPK15Q8TD08 544 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 FEM1AQ9BSK4 669 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 TDRD1Q9BXT4 1180 aaKnown RBP14.94□□□□□ -0.02
PHF3-209ENST00000509330 FAM50BQ9Y247 325 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 TYW5A2RUC4 315 aaKnown RBP14.94□□□□□ -0.02
PHF3-209ENST00000509330 CD3EAPO15446 510 aaKnown RBP14.94□□□□□ -0.02
PHF3-209ENST00000509330 PRAMEF12O95522 483 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 PRLP01236 227 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 ALPIP09923 528 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 HNRNPLP14866 589 aaKnown RBP eCLIP14.94□□□□□ -0.02
PHF3-209ENST00000509330 ARL13AQ5H913 290 aaPredicted RBP14.94□□□□□ -0.02
PHF3-209ENST00000509330 TMEM207Q6UWW9 146 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 ITIH5Q86UX2 942 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 TDRD5Q8NAT2 981 aaKnown RBP14.94□□□□□ -0.02
PHF3-209ENST00000509330 WDR55Q9H6Y2 383 aaPredicted RBP14.94□□□□□ -0.02
PHF3-209ENST00000509330 OXSMQ9NWU1 459 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 TBC1D30Q9Y2I9 924 aa14.94□□□□□ -0.02
PHF3-209ENST00000509330 EYSQ5T1H1 3165 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 GREM1O60565 184 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 LUC7L3O95232 432 aaKnown RBP14.93□□□□□ -0.02
PHF3-209ENST00000509330 PIGNO95427 931 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 ATP6V1G2O95670 118 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 S1PR4O95977 384 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 CTSAP10619 480 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 ARSAP15289 507 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 GRK2P25098 689 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 CTNNB1P35222 781 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 PPM1AP35813 382 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 MNAT1P51948 309 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 SLC9B1Q4ZJI4 515 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 SETD3Q86TU7 594 aaPredicted RBP14.93□□□□□ -0.02
PHF3-209ENST00000509330 CAMK1DQ8IU85 385 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 CCDC117Q8IWD4 279 aaPredicted RBP14.93□□□□□ -0.02
PHF3-209ENST00000509330 RAB3IL1Q8TBN0 382 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 CALML6Q8TD86 181 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 BRSK1Q8TDC3 778 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 GPR78Q96P69 363 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 NUDCD1Q96RS6 583 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 TRIB3Q96RU7 358 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 ALG9Q9H6U8 611 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 COG4Q9H9E3 785 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 L3MBTL1Q9Y468 752 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 ANAPC1Q9H1A4 1944 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 LILRB3O75022 631 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 FGBP02675 491 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 MYOGP15173 224 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 DNAJB1P25685 340 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 LEPRP48357 1165 aaKnown RBP14.93□□□□□ -0.02
PHF3-209ENST00000509330 EPHB1P54762 984 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 SNCBQ16143 134 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 CMTM8Q8IZV2 173 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 TXNDC5Q8NBS9 432 aaKnown RBP14.93□□□□□ -0.02
PHF3-209ENST00000509330 TTC8Q8TAM2 541 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 FATE1Q969F0 183 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 NSL1Q96IY1 281 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 ZNF599Q96NL3 588 aa14.93□□□□□ -0.02
PHF3-209ENST00000509330 LRMDAQ9H2I8 198 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms