RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 SIPA1Q96FS4 1042 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 IFT43Q96FT9 208 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 KLHL32Q96NJ5 620 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 SERPINB12Q96P63 405 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 IL22Q9GZX6 179 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 MTG2Q9H4K7 406 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 ZDHHC18Q9NUE0 388 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 KCTD5Q9NXV2 234 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 NFKBIL1Q9UBC1 381 aaPredicted RBP8.69□□□□□ -1.02
USP46-207ENST00000508499 FBXO4Q9UKT5 387 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 TTLL3Q9Y4R7 772 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 PCDHB9Q9Y5E1 797 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 PCDHGC4Q9Y5F7 938 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 A0A0C4DFX4 3053 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 TRPM6Q9BX84 2022 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 CACNA1IQ9P0X4 2223 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 TCRBV21S2A2A0A5A6 115 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 MAGEB16A2A368 324 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 RGSL1A5PLK6 1076 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 PRR33A8MZF0 331 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 CTIFO43310 598 aaKnown RBP8.68□□□□□ -1.02
USP46-207ENST00000508499 TSPAN6O43657 245 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 PLRG1O43660 514 aaKnown RBP8.68□□□□□ -1.02
USP46-207ENST00000508499 PI15O43692 258 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 PMPCBO75439 489 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 TMEM63AO94886 807 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 PIGNO95427 931 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 CPP00450 1065 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 PDGFBP01127 241 aaPredicted RBP8.68□□□□□ -1.02
USP46-207ENST00000508499 IL1BP01584 269 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 DNTTP04053 509 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 TIMP2P16035 220 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 ECHS1P30084 290 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 HMGCLP35914 325 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 MMP12P39900 470 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 P2RY2P41231 377 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 ITGA8P53708 1063 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 PDE1BQ01064 536 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 GUCY2DQ02846 1103 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 CDKN3Q16667 212 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 MAP7D1Q3KQU3 841 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 TMEM52BQ4KMG9 183 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 SPDYCQ5MJ68 293 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 AGBL4Q5VU57 503 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 ZDHHC24Q6UX98 284 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 USP45Q70EL2 814 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 DPPA4Q7L190 304 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 PARS2Q7L3T8 475 aaKnown RBP8.68□□□□□ -1.02
USP46-207ENST00000508499 NLRP9Q7RTR0 991 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 CAND1Q86VP6 1230 aaKnown RBP8.68□□□□□ -1.02
USP46-207ENST00000508499 NLRP8Q86W28 1048 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 ZSWIM9Q86XI8 627 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 CCNJLQ8IV13 435 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 RYBPQ8N488 228 aaPredicted RBP8.68□□□□□ -1.02
USP46-207ENST00000508499 GPR161Q8N6U8 529 aaKnown RBP8.68□□□□□ -1.02
USP46-207ENST00000508499 LRRN4CLQ8ND94 238 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 FLCNQ8NFG4 579 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 TSTD1Q8NFU3 115 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 IPMKQ8NFU5 416 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 OR6K2Q8NGY2 324 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 GRIN3AQ8TCU5 1115 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 BRSK1Q8TDC3 778 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 ASB12Q8WXK4 309 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 UBXN4Q92575 508 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 PBXIP1Q96AQ6 731 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 ARRDC3Q96B67 414 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 SGSM3Q96HU1 749 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 NAT9Q9BTE0 207 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 CDH19Q9H159 772 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 ANKZF1Q9H8Y5 726 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 SGK2Q9HBY8 427 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 MRM3Q9HC36 420 aaKnown RBP8.68□□□□□ -1.02
USP46-207ENST00000508499 EPB41L5Q9HCM4 733 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 PREBQ9HCU5 417 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 ZDHHC4Q9NPG8 344 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 NPDC1Q9NQX5 325 aaPredicted RBP8.68□□□□□ -1.02
USP46-207ENST00000508499 DYRK4Q9NR20 520 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 RABGEF1Q9UJ41 708 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 CHKBQ9Y259 395 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 BPTFQ12830 3046 aa8.68□□□□□ -1.02
USP46-207ENST00000508499 TCRBV7S3A2A0A539 114 aa8.67□□□□□ -1.02
USP46-207ENST00000508499 TTC24A2A3L6 582 aaPredicted RBP8.67□□□□□ -1.02
USP46-207ENST00000508499 MROH6A6NGR9 719 aa8.67□□□□□ -1.02
USP46-207ENST00000508499 KPNA3O00505 521 aaPredicted RBP8.67□□□□□ -1.02
USP46-207ENST00000508499 MID1O15344 667 aa8.67□□□□□ -1.02
USP46-207ENST00000508499 SPINT1O43278 529 aa8.67□□□□□ -1.02
USP46-207ENST00000508499 AGTP01019 485 aa8.67□□□□□ -1.02
USP46-207ENST00000508499 DCNP07585 359 aaKnown RBP8.67□□□□□ -1.02
USP46-207ENST00000508499 CYP2A6P11509 494 aaPredicted RBP8.67□□□□□ -1.02
USP46-207ENST00000508499 GKP32189 559 aa8.67□□□□□ -1.02
USP46-207ENST00000508499 NUDT1P36639 197 aa8.67□□□□□ -1.02
USP46-207ENST00000508499 WASP42768 502 aa8.67□□□□□ -1.02
USP46-207ENST00000508499 PSMD8P48556 350 aa8.67□□□□□ -1.02
USP46-207ENST00000508499 TPMTP51580 245 aa8.67□□□□□ -1.02
USP46-207ENST00000508499 TAS2R38P59533 333 aa8.67□□□□□ -1.02
USP46-207ENST00000508499 SLC7A5Q01650 507 aa8.67□□□□□ -1.02
USP46-207ENST00000508499 ACVR1Q04771 509 aa8.67□□□□□ -1.02
USP46-207ENST00000508499 CNTN1Q12860 1018 aa8.67□□□□□ -1.02
USP46-207ENST00000508499 FRG1Q14331 258 aaKnown RBP8.67□□□□□ -1.02
USP46-207ENST00000508499 QPCTQ16769 361 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms