RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-225	ENST00000508476	ITGAD	Q13349	1161 aa		4.64	□□□□□ -1.67
UBE2D3-225	ENST00000508476	NFIL3	Q16649	462 aa		4.64	□□□□□ -1.67
UBE2D3-225	ENST00000508476	WDR73	Q6P4I2	378 aa		4.64	□□□□□ -1.67
UBE2D3-225	ENST00000508476	SLC22A25	Q6T423	547 aa		4.64	□□□□□ -1.67
UBE2D3-225	ENST00000508476	FOXRED2	Q8IWF2	684 aa		4.64	□□□□□ -1.67
UBE2D3-225	ENST00000508476	HERVK_113	Q902F9	699 aa		4.64	□□□□□ -1.67
UBE2D3-225	ENST00000508476	CD101	Q93033	1021 aa		4.64	□□□□□ -1.67
UBE2D3-225	ENST00000508476	OTULIN	Q96BN8	352 aa		4.64	□□□□□ -1.67
UBE2D3-225	ENST00000508476	SIN3A	Q96ST3	1273 aa		4.64	□□□□□ -1.67
UBE2D3-225	ENST00000508476	MMTAG2	Q9BU76	263 aa	Known RBP	4.64	□□□□□ -1.67
UBE2D3-225	ENST00000508476	UBTD1	Q9HAC8	227 aa		4.64	□□□□□ -1.67
UBE2D3-225	ENST00000508476	SMYD2	Q9NRG4	433 aa		4.64	□□□□□ -1.67
UBE2D3-225	ENST00000508476	SIX4	Q9UIU6	781 aa		4.64	□□□□□ -1.67
UBE2D3-225	ENST00000508476		A0A0G2JPF8	293 aa		4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	HNRNPCL3	B7ZW38	293 aa		4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	TEX22	C9J3V5	150 aa		4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	EIF3F	O00303	357 aa	Predicted RBP	4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	BCAT2	O15382	392 aa	Predicted RBP	4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	PLRG1	O43660	514 aa	Known RBP	4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	HNRNPCL1	O60812	293 aa	Known RBP	4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	TACC1	O75410	805 aa		4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	SP1	P08047	785 aa		4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	HNRNPCL4	P0DMR1	293 aa		4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	ETFA	P13804	333 aa		4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	AMD1	P17707	334 aa		4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	EIF2S3	P41091	472 aa	Known RBP	4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	ZNF132	P52740	706 aa		4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	UBE3A	Q05086	875 aa		4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	PPFIA1	Q13136	1202 aa		4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	TNFAIP1	Q13829	316 aa		4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	TAF11	Q15544	211 aa		4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	ATP13A5	Q4VNC0	1218 aa		4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	STPG1	Q5TH74	334 aa		4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	HIST2H2BC	Q6DN03	193 aa		4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	HIST2H2BD	Q6DRA6	164 aa		4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	FBXO46	Q6PJ61	603 aa	Predicted RBP	4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	TADA2B	Q86TJ2	420 aa		4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	EXOC3L1	Q86VI1	746 aa		4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	DHX40	Q8IX18	779 aa	Known RBP	4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	HERPUD2	Q9BSE4	406 aa		4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	HAUS8	Q9BT25	410 aa		4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	ESRP2	Q9H6T0	727 aa	Known RBP	4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	EBF2	Q9HAK2	575 aa		4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	C1RL	Q9NZP8	487 aa		4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	HSPB7	Q9UBY9	170 aa		4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	TINAG	Q9UJW2	476 aa		4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	CARD8	Q9Y2G2	431 aa		4.63	□□□□□ -1.67
UBE2D3-225	ENST00000508476	SOCS5	O75159	536 aa		4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	HEXA	P06865	529 aa		4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	GALT	P07902	379 aa		4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	CYC1	P08574	325 aa		4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	G6PD	P11413	515 aa		4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	CHAT	P28329	748 aa		4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	STX2	P32856	288 aa		4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	PGM1	P36871	562 aa		4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	FUT6	P51993	359 aa		4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	CDH15	P55291	814 aa		4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	VEPH1	Q14D04	833 aa		4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	EIF2S3L	Q2VIR3	472 aa	Known RBP	4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	SGO1	Q5FBB7	561 aa		4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	ZNF766	Q5HY98	468 aa		4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	LCE1E	Q5T753	118 aa		4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	GSG1L	Q6UXU4	331 aa		4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	DSTYK	Q6XUX3	929 aa		4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	MTSS1L	Q765P7	747 aa		4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	TDRP	Q86YL5	185 aa		4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	SLC35F3	Q8IY50	421 aa		4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	CIART	Q8N365	385 aa	Predicted RBP	4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	ANKRD42	Q8N9B4	389 aa		4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	TNIP2	Q8NFZ5	429 aa		4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	FIG4	Q92562	907 aa		4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	TMEM19	Q96HH6	336 aa		4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	BBS4	Q96RK4	519 aa		4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	KCNN2	Q9H2S1	579 aa		4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	TMEM160	Q9NX00	188 aa		4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	ERRFI1	Q9UJM3	462 aa	Predicted RBP	4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	ZNF711	Q9Y462	761 aa		4.62	□□□□□ -1.67
UBE2D3-225	ENST00000508476	PRR23A	A6NEV1	266 aa		4.61	□□□□□ -1.67
UBE2D3-225	ENST00000508476	MTA2	O94776	668 aa		4.61	□□□□□ -1.67
UBE2D3-225	ENST00000508476	AGA	P20933	346 aa		4.61	□□□□□ -1.67
UBE2D3-225	ENST00000508476	POU1F1	P28069	291 aa		4.61	□□□□□ -1.67
UBE2D3-225	ENST00000508476	NEDD9	Q14511	834 aa		4.61	□□□□□ -1.67
UBE2D3-225	ENST00000508476	RBBP5	Q15291	538 aa	Known RBP	4.61	□□□□□ -1.67
UBE2D3-225	ENST00000508476	PPP6R3	Q5H9R7	873 aa	Predicted RBP	4.61	□□□□□ -1.67
UBE2D3-225	ENST00000508476	OTUD3	Q5T2D3	398 aa	Predicted RBP	4.61	□□□□□ -1.67
UBE2D3-225	ENST00000508476	TMEM81	Q6P7N7	255 aa		4.61	□□□□□ -1.67
UBE2D3-225	ENST00000508476	LRRTM4	Q86VH4	590 aa		4.61	□□□□□ -1.67
UBE2D3-225	ENST00000508476	TMTC1	Q8IUR5	882 aa		4.61	□□□□□ -1.67
UBE2D3-225	ENST00000508476	ODF3L1	Q8IXM7	274 aa		4.61	□□□□□ -1.67
UBE2D3-225	ENST00000508476	AGBL3	Q8NEM8	1001 aa		4.61	□□□□□ -1.67
UBE2D3-225	ENST00000508476	FBXL8	Q96CD0	374 aa		4.61	□□□□□ -1.67
UBE2D3-225	ENST00000508476	ZNF570	Q96NI8	536 aa		4.61	□□□□□ -1.67
UBE2D3-225	ENST00000508476	INTS2	Q9H0H0	1204 aa	Known RBP	4.61	□□□□□ -1.67
UBE2D3-225	ENST00000508476	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.61	□□□□□ -1.67
UBE2D3-225	ENST00000508476	CNGB3	Q9NQW8	809 aa		4.61	□□□□□ -1.67
UBE2D3-225	ENST00000508476	C20orf141	Q9NUB4	165 aa		4.61	□□□□□ -1.67
UBE2D3-225	ENST00000508476	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
UBE2D3-225	ENST00000508476	LSM4	Q9Y4Z0	139 aa	Known RBP	4.61	□□□□□ -1.67
UBE2D3-225	ENST00000508476	SRC	P12931	536 aa		4.6	□□□□□ -1.67
UBE2D3-225	ENST00000508476	GPT	P24298	496 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms