RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 SLC27A6Q9Y2P4 619 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 EVPLLA8MZ36 301 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 RASA4BC9J798 803 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 KCNN4O15554 427 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 MSI1O43347 362 aaKnown RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 RASA4O43374 803 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 LTFP02788 710 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 SRPRAP08240 638 aaKnown RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 ESRRAP11474 423 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 JUNDP17535 347 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 SLC9A1P19634 815 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 S100A5P33763 92 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 CCT8P50990 548 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 AFF3P51826 1226 aaKnown RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 ARL4CP56559 192 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 ABCE1P61221 599 aaKnown RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 GPC5P78333 572 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 BIKQ13323 160 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 GNA13Q14344 377 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 SMAD2Q15796 467 aaKnown RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 SGO1Q5FBB7 561 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 SH3PXD2AQ5TCZ1 1133 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 PACS1Q6VY07 963 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 NT5DC3Q86UY8 548 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 CRLF3Q8IUI8 442 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 BBS7Q8IWZ6 715 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 ZBED8Q8IZ13 594 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 PNPLA1Q8N8W4 532 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 IPMKQ8NFU5 416 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 KCNE4Q8WWG9 221 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 NCSTNQ92542 709 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 TMEM159Q96B96 161 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 CENPTQ96BT3 561 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 GBP5Q96PP8 586 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 SMOC2Q9H3U7 446 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 RAPGEFL1Q9UHV5 662 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 FBXO4Q9UKT5 387 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 NAALADL1Q9UQQ1 740 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 PADI2Q9Y2J8 665 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 DIDO1Q9BTC0 2240 aaKnown RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 A6NL46 340 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 FAM227AF5H4B4 570 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 RTN2O75298 545 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 AVILO75366 819 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 ITGALP20701 1170 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 TYK2P29597 1187 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 ARHGAP25P42331 645 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 PRIM2P49643 509 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 CCR4P51679 360 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 PRKG2Q13237 762 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 ITGADQ13349 1161 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 PIGHQ14442 188 aaPredicted RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 TRIP4Q15650 581 aaPredicted RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 TMEM119Q4V9L6 283 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 ERMARDQ5T6L9 678 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 C1QTNF12Q5T7M4 302 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 AGMOQ6ZNB7 445 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 HFE2Q6ZVN8 426 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 PARGQ86W56 976 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 UNC93AQ86WB7 457 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 MAP4K3Q8IVH8 894 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 MYO1HQ8N1T3 1032 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 LRRC52Q8N7C0 313 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 C12orf29Q8N999 325 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 OR2T3Q8NH03 318 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 BLOC1S5Q8TDH9 187 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 GAB3Q8WWW8 586 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 PTPRN2Q92932 1015 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 NXPE2Q96DL1 559 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 GSDMCQ9BYG8 508 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 EML4Q9HC35 981 aaKnown RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 HCN3Q9P1Z3 774 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 MTRRQ9UBK8 725 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 HCN2Q9UL51 889 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 TRIM33Q9UPN9 1127 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 SVILO95425 2214 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 H3BMM5 538 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 L7N2F9 121 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 IRAK2O43187 625 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 C1RP00736 705 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 CXCL10P02778 98 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 RETP07949 1114 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 PABPC1P11940 636 aaKnown RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 PCNAP12004 261 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 CUL4AQ13619 759 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 MAPRE2Q15555 327 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 C21orf62-AS1Q17RA5 79 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 P3H1Q32P28 736 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 CRTC3Q6UUV7 619 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 VN1R5Q7Z5H4 357 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 SLC44A2Q8IWA5 706 aaPredicted RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 SAMD14Q8IZD0 417 aaPredicted RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 OR6K2Q8NGY2 324 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 RNASE11Q8TAA1 199 aaKnown RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 VPS33AQ96AX1 596 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 TCEAL4Q96EI5 215 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 MRPL48Q96GC5 212 aaKnown RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 PCYT2Q99447 389 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 AGPAT1Q99943 283 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 ZDHHC5Q9C0B5 715 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms