RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 ITIH2P19823 946 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 SP100P23497 879 aaPredicted RBP7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 CD27P26842 260 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 RRM2P31350 389 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 ADCY8P40145 1251 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 CRYBB1P53674 252 aaPredicted RBP7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 EIF3BP55884 814 aaKnown RBP7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 RPS8P62241 208 aaKnown RBP7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 GRIK3Q13003 919 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 BAATQ14032 418 aaPredicted RBP7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 AOC3Q16853 763 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 NRN1LQ496H8 165 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 EPC2Q52LR7 807 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 WBP2NLQ6ICG8 309 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 C15orf39Q6ZRI6 1047 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 CLEC17AQ6ZS10 378 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 STXBP4Q6ZWJ1 553 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 STX12Q86Y82 276 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 MAPKAPK5Q8IW41 473 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 BATF2Q8N1L9 274 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 OR2T3Q8NH03 318 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 ZNF483Q8TF39 744 aaPredicted RBP7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 ROBO4Q8WZ75 1007 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 CPT1BQ92523 772 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 DVL3Q92997 716 aaPredicted RBP7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 ZNF707Q96C28 371 aaPredicted RBP7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 RASD2Q96D21 266 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 TRNT1Q96Q11 434 aaKnown RBP7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 RBM4BQ9BQ04 359 aaKnown RBP7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 RBM4Q9BWF3 364 aaKnown RBP7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 WNT10AQ9GZT5 417 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 C12orf65Q9H3J6 166 aaKnown RBP7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 PANK4Q9NVE7 773 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 LARSQ9P2J5 1176 aaKnown RBP7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 THEGQ9P2T0 379 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 TTC7AQ9ULT0 858 aaPredicted RBP7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 SLC9A8Q9Y2E8 581 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 ST14Q9Y5Y6 855 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 MAST1Q9Y2H9 1570 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 KTN1Q86UP2 1357 aaKnown RBP7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 A0A087WZY1 265 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 TCRBV5S4A2TA0A5A2 114 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 SH3D21A4FU49 640 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 KDM4EB2RXH2 506 aaPredicted RBP7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 TMEM233B4DJY2 109 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 LGALS8O00214 317 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 PRRG1O14668 218 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 ZNF197O14709 1029 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 OR6B1O95007 311 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 GBAP04062 536 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 ALOX5P09917 674 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 OR8G3PP0DMU2 310 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 IL1R2P27930 398 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 TKTP29401 623 aaKnown RBP7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 TNK2Q07912 1038 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 CCINQ13939 588 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 NONOQ15233 471 aaKnown RBP eCLIP7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 TRIM60Q495X7 471 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 FOXR2Q6PJQ5 311 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 TOM1L2Q6ZVM7 507 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 TRMT10CQ7L0Y3 403 aaKnown RBP7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 UNC5BQ8IZJ1 945 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 CLYBLQ8N0X4 340 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 MINDY1Q8N5J2 469 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 TOP6BLQ8N6T0 577 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 ZNF461Q8TAF7 563 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 SELENOMQ8WWX9 145 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 DPYSL5Q9BPU6 564 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 TUFT1Q9NNX1 390 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 KCND2Q9NZV8 630 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 SCOCQ9UIL1 159 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 MID2Q9UJV3 735 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 NENFQ9UMX5 172 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 FCF1Q9Y324 198 aaKnown RBP7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 PCDHA2Q9Y5H9 948 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 B3GALT1Q9Y5Z6 326 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 FAM135AQ9P2D6 1515 aa7.56□□□□□ -1.2
PDGFRA-206ENST00000508170 ST20-MTHFSA0A0A6YYL1 179 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 E9PMD0 336 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 HRKO00198 91 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 ADAM11O75078 769 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 TULP3O75386 442 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 TOM1L1O75674 476 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 CLPXO76031 633 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 SEC14L2O76054 403 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 NTSR2O95665 410 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 GDI2P50395 445 aaKnown RBP7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 DGKEP52429 567 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 SUCLG1P53597 346 aaKnown RBP7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 PLAURQ03405 335 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 PPP3CAQ08209 521 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 OLIG2Q13516 323 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 PCSK7Q16549 785 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 Q4G0T1 1027 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 RTP2Q5QGT7 225 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 ADGRF1Q5T601 910 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 ARMC12Q5T9G4 340 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 SLFN13Q68D06 897 aa7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 KIAA0930Q6ICG6 404 aaPredicted RBP7.55□□□□□ -1.2
PDGFRA-206ENST00000508170 RINT1Q6NUQ1 792 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms